메뉴 건너뛰기




Volumn 179, Issue 4, 2008, Pages 2037-2043

Molecular basis of spectral tuning in the red- and green-sensitive (M/LWS) pigments in vertebrates

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; VISUAL PIGMENT; COMPLEMENTARY DNA; OPSIN;

EID: 55749097435     PISSN: 00166731     EISSN: 00166731     Source Type: Journal    
DOI: 10.1534/genetics.108.090449     Document Type: Article
Times cited : (93)

References (37)
  • 1
    • 0028289475 scopus 로고
    • Molecular determinants of human red/green color discrimination
    • ASENJO, A. B., J. RIM and D. D. OPRIAN, 1994 Molecular determinants of human red/green color discrimination. Neuron 12: 1131-1138.
    • (1994) Neuron , vol.12 , pp. 1131-1138
    • ASENJO, A.B.1    RIM, J.2    OPRIAN, D.D.3
  • 2
    • 0035923434 scopus 로고    scopus 로고
    • Regulation of phototransduction in short-wavelength cone visual pigments via the retinylidene Schiff base counterion
    • BABU, K. R., A. DUKKIPATI, R. R. BIRGE and B. E. KNOX, 2001 Regulation of phototransduction in short-wavelength cone visual pigments via the retinylidene Schiff base counterion. Biochemistry 40: 13760-13766.
    • (2001) Biochemistry , vol.40 , pp. 13760-13766
    • BABU, K.R.1    DUKKIPATI, A.2    BIRGE, R.R.3    KNOX, B.E.4
  • 3
    • 0026661975 scopus 로고
    • Introduction of hydroxyl-bearing amino acids causes bathochromic spectral shifts in rhodopsin. Amino acid substitutions responsible for red-green color pigment spectral tuning
    • CHAN, T., M. LEE and T. P. SAKMAR, 1992 Introduction of hydroxyl-bearing amino acids causes bathochromic spectral shifts in rhodopsin. Amino acid substitutions responsible for red-green color pigment spectral tuning. J. Biol. Chem. 267: 9478-9480.
    • (1992) J. Biol. Chem , vol.267 , pp. 9478-9480
    • CHAN, T.1    LEE, M.2    SAKMAR, T.P.3
  • 4
    • 34248231185 scopus 로고    scopus 로고
    • Ichnology, paleoecology and taphonomy of a Gondwanan early vertebrate habitat: Insights from the Ordovician Anzaldo Formation, Bolivia
    • DAVIES, N. S., I. J. SANSOM, G. L. ALBANESI and R. CESPEDES, 2007 Ichnology, paleoecology and taphonomy of a Gondwanan early vertebrate habitat: insights from the Ordovician Anzaldo Formation, Bolivia. Palaeogeogr. Palaeoclimatol. Palaeoecol. 249: 18-35.
    • (2007) Palaeogeogr. Palaeoclimatol. Palaeoecol , vol.249 , pp. 18-35
    • DAVIES, N.S.1    SANSOM, I.J.2    ALBANESI, G.L.3    CESPEDES, R.4
  • 6
    • 0344951436 scopus 로고    scopus 로고
    • Photobiology of retinal proteins
    • edited by T. P. COOHILL and D. P. VALENZENO. Valdenmar, Overland Park, KS
    • EBREY, T. G., and Y. TAKAHASHI, 2002 Photobiology of retinal proteins, pp. 101-133 in Photobiology for the 21st Century, edited by T. P. COOHILL and D. P. VALENZENO. Valdenmar, Overland Park, KS.
    • (2002) Photobiology for the 21st Century , pp. 101-133
    • EBREY, T.G.1    TAKAHASHI, Y.2
  • 8
    • 2942652696 scopus 로고    scopus 로고
    • Mutagenesis and reconstitution of middle-to-long-wave-sensitive visual pigments of New World monkeys for testing the tuning effect of residues at sites 229 and 233
    • HIRAMATSU, C., F. B. RADLWIMMER, S. YOKOYAMA and S. KAWAMURA, 2004 Mutagenesis and reconstitution of middle-to-long-wave-sensitive visual pigments of New World monkeys for testing the tuning effect of residues at sites 229 and 233. Vision Res. 44: 2225-2231.
    • (2004) Vision Res , vol.44 , pp. 2225-2231
    • HIRAMATSU, C.1    RADLWIMMER, F.B.2    YOKOYAMA, S.3    KAWAMURA, S.4
  • 9
    • 32644439807 scopus 로고    scopus 로고
    • Color-vision polymorphism in wild capuchins (Cebus capucinus) and spider monkeys (Ateles geoffroyi) in Costa Rica
    • HIRAMATSU, C., T. TSUTSUI, Y. MATSUMOTO, F. AURELI, L. M. FEDIGAN et al., 2005 Color-vision polymorphism in wild capuchins (Cebus capucinus) and spider monkeys (Ateles geoffroyi) in Costa Rica. Am. J. Primatol. 67: 447-461.
    • (2005) Am. J. Primatol , vol.67 , pp. 447-461
    • HIRAMATSU, C.1    TSUTSUI, T.2    MATSUMOTO, Y.3    AURELI, F.4    FEDIGAN, L.M.5
  • 10
    • 0031986508 scopus 로고    scopus 로고
    • Functional characterization of visual and nonvisual pigments of American chameleon (Anolis carolinensis)
    • KAWAMURA, S., and S. YOKOYAMA, 1998 Functional characterization of visual and nonvisual pigments of American chameleon (Anolis carolinensis). Vision Res. 38: 37-44.
    • (1998) Vision Res , vol.38 , pp. 37-44
    • KAWAMURA, S.1    YOKOYAMA, S.2
  • 11
    • 33645788379 scopus 로고    scopus 로고
    • Functional characterization of visual opsin repertoire in Medaka (Oryzias latipes)
    • MATSUMOTO, Y., S. FUKAMACHI, H. MITANI and S. KAWAMURA, 2006 Functional characterization of visual opsin repertoire in Medaka (Oryzias latipes). Gene 371: 268-278.
    • (2006) Gene , vol.371 , pp. 268-278
    • MATSUMOTO, Y.1    FUKAMACHI, S.2    MITANI, H.3    KAWAMURA, S.4
  • 12
    • 0026602578 scopus 로고
    • Absorption spectra of human cone pigments
    • MERBS, S. L., and J. NATHANS, 1992 Absorption spectra of human cone pigments. Nature 356: 433-435.
    • (1992) Nature , vol.356 , pp. 433-435
    • MERBS, S.L.1    NATHANS, J.2
  • 13
    • 0027691379 scopus 로고
    • Role of hydroxyl-bearing amino acids in differentially tuning the absorption spectra of the human red and green cone pigments
    • MERBS, S. L., and J. NATHANS, 1993 Role of hydroxyl-bearing amino acids in differentially tuning the absorption spectra of the human red and green cone pigments. Photochem. Photobiol. 58: 706-710.
    • (1993) Photochem. Photobiol , vol.58 , pp. 706-710
    • MERBS, S.L.1    NATHANS, J.2
  • 14
    • 0025162902 scopus 로고
    • Determinants of visual pigment absorbance: Identification of the retinylidene Schiff's base counterion in bovine rhodopsin
    • NATHANS, J., 1990a Determinants of visual pigment absorbance: identification of the retinylidene Schiff's base counterion in bovine rhodopsin. Biochemistry 29: 9746-9752.
    • (1990) Biochemistry , vol.29 , pp. 9746-9752
    • NATHANS, J.1
  • 15
    • 0025012994 scopus 로고
    • Determinants of visual pigment absorbance: Role of charged amino acids in the putative transmembrane segments
    • NATHANS, J., 1990b Determinants of visual pigment absorbance: role of charged amino acids in the putative transmembrane segments. Biochemistry 29: 937-942.
    • (1990) Biochemistry , vol.29 , pp. 937-942
    • NATHANS, J.1
  • 16
    • 0025729153 scopus 로고
    • Spectral tuning of pigments underlying red-green color vision
    • NEITZ, M., J. NEITZ and G. H. JACOBS, 1991 Spectral tuning of pigments underlying red-green color vision. Science 252: 971-974.
    • (1991) Science , vol.252 , pp. 971-974
    • NEITZ, M.1    NEITZ, J.2    JACOBS, G.H.3
  • 17
    • 33645535034 scopus 로고    scopus 로고
    • G protein-coupled receptor rhodopsin
    • PALCZEWSKI, K., 2006 G protein-coupled receptor rhodopsin. Annu. Rev. Biochem. 75: 743-767.
    • (2006) Annu. Rev. Biochem , vol.75 , pp. 743-767
    • PALCZEWSKI, K.1
  • 18
    • 0343177634 scopus 로고
    • Glutamic acid-113 serves as the retinylidene Schiff base counterion in bovine rhodopsin
    • SAKMAR, T. P., R. R. FRANKE and H. G. KHORANA, 1989 Glutamic acid-113 serves as the retinylidene Schiff base counterion in bovine rhodopsin. Proc. Natl. Acad. Sci. USA 86: 8309-8313.
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 8309-8313
    • SAKMAR, T.P.1    FRANKE, R.R.2    KHORANA, H.G.3
  • 19
    • 0038261973 scopus 로고    scopus 로고
    • Molecular analysis of the evolutionary significance of ultraviolet vision in vertebrates
    • SHI, Y., and S. YOKOYAMA, 2003 Molecular analysis of the evolutionary significance of ultraviolet vision in vertebrates. Proc. Natl. Acad. Sci. USA 100: 8308-8313.
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 8308-8313
    • SHI, Y.1    YOKOYAMA, S.2
  • 20
    • 0035949547 scopus 로고    scopus 로고
    • Molecular genetics and the evolution of ultraviolet vision in vertebrates
    • SHI, Y., F. B. RADLWIMMER and S. YOKOYAMA, 2001 Molecular genetics and the evolution of ultraviolet vision in vertebrates. Proc. Natl. Acad. Sci. USA 98: 11731-11736.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 11731-11736
    • SHI, Y.1    RADLWIMMER, F.B.2    YOKOYAMA, S.3
  • 21
    • 17244374513 scopus 로고    scopus 로고
    • Parallelism of amino acid changes at the RH1 affecting spectral sensitivity among deep-water cichlids from Lakes Tanganyika and Malawi
    • SUGAWARA, T., Y. TERAI, H. IMAI, G. F. TURNER, S. KOBLMULLER et al., 2005 Parallelism of amino acid changes at the RH1 affecting spectral sensitivity among deep-water cichlids from Lakes Tanganyika and Malawi. Proc. Natl. Acad. Sci. USA 102: 5448-5453.
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 5448-5453
    • SUGAWARA, T.1    TERAI, Y.2    IMAI, H.3    TURNER, G.F.4    KOBLMULLER, S.5
  • 22
    • 0030786395 scopus 로고    scopus 로고
    • Mechanisms of spectral tuning in the mouse green cone pigment
    • SUN, H., J. P. MACKE and J. NATHANS, 1997 Mechanisms of spectral tuning in the mouse green cone pigment. Proc. Natl. Acad. Sci. USA 94: 8860-8865.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 8860-8865
    • SUN, H.1    MACKE, J.P.2    NATHANS, J.3
  • 23
    • 0012394062 scopus 로고    scopus 로고
    • Molecular basis of spectral tuning in the newt short wavelength sensitive visual pigment
    • TAKAHASHI, Y., and T. G. EBREY, 2003 Molecular basis of spectral tuning in the newt short wavelength sensitive visual pigment. Biochemistry 42: 6025-6034.
    • (2003) Biochemistry , vol.42 , pp. 6025-6034
    • TAKAHASHI, Y.1    EBREY, T.G.2
  • 24
    • 32544455269 scopus 로고    scopus 로고
    • Genetic basis of spectral tuning in the violet-sensitive visual pigment of African clawed frog, Xenopus laevis
    • TAKAHASHI, Y., and S. YOKOYAMA, 2005 Genetic basis of spectral tuning in the violet-sensitive visual pigment of African clawed frog, Xenopus laevis. Genetics 171: 1153-1160.
    • (2005) Genetics , vol.171 , pp. 1153-1160
    • TAKAHASHI, Y.1    YOKOYAMA, S.2
  • 26
    • 0030683599 scopus 로고    scopus 로고
    • PAML: A program package for phylogenetic analysis by maximum likelihood
    • YANG, Z., 1997 PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13: 555-556.
    • (1997) Comput. Appl. Biosci , vol.13 , pp. 555-556
    • YANG, Z.1
  • 27
    • 0028820333 scopus 로고
    • A new method of inference of ancestral nucleotide and amino acid sequences
    • YANG, Z., S. KUMAR and M. NEI, 1995 A new method of inference of ancestral nucleotide and amino acid sequences. Genetics 141: 1641-1650.
    • (1995) Genetics , vol.141 , pp. 1641-1650
    • YANG, Z.1    KUMAR, S.2    NEI, M.3
  • 28
    • 0025634024 scopus 로고
    • Convergent evolution of the red- and green-like visual pigment genes in fish, Astyanax fasciatus, and human
    • YOKOYAMA, R., and S. YOKOYAMA, 1990 Convergent evolution of the red- and green-like visual pigment genes in fish, Astyanax fasciatus, and human. Proc. Natl. Acad. Sci. USA 87: 9315-9318.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 9315-9318
    • YOKOYAMA, R.1    YOKOYAMA, S.2
  • 29
    • 0028835362 scopus 로고
    • Amino acid replacements and wavelength absorption of visual pigments in vertebrates
    • YOKOYAMA, S., 1995 Amino acid replacements and wavelength absorption of visual pigments in vertebrates. Mol. Biol. Evol. 12: 53-61.
    • (1995) Mol. Biol. Evol , vol.12 , pp. 53-61
    • YOKOYAMA, S.1
  • 30
    • 0034002482 scopus 로고    scopus 로고
    • Molecular evolution of vertebrate visual pigments
    • YOKOYAMA, S., 2000a Molecular evolution of vertebrate visual pigments. Prog. Retin. Eye Res. 19: 385-419.
    • (2000) Prog. Retin. Eye Res , vol.19 , pp. 385-419
    • YOKOYAMA, S.1
  • 31
    • 0034089338 scopus 로고    scopus 로고
    • Phylogenetic analysis and experimental approaches to study color vision in vertebrates
    • YOKOYAMA, S., 2000b Phylogenetic analysis and experimental approaches to study color vision in vertebrates. Methods Enzymol. 315: 312-325.
    • (2000) Methods Enzymol , vol.315 , pp. 312-325
    • YOKOYAMA, S.1
  • 32
    • 0037202369 scopus 로고    scopus 로고
    • Molecular evolution of color vision in vertebrates
    • YOKOYAMA, S., 2002 Molecular evolution of color vision in vertebrates. Gene 300: 69-78.
    • (2002) Gene , vol.300 , pp. 69-78
    • YOKOYAMA, S.1
  • 33
    • 0034857787 scopus 로고    scopus 로고
    • The molecular genetics and evolution of red and green color vision in vertebrates
    • YOKOYAMA, S., and F. B. RADLWIMMER, 2001 The molecular genetics and evolution of red and green color vision in vertebrates. Genetics 158: 1697-1710.
    • (2001) Genetics , vol.158 , pp. 1697-1710
    • YOKOYAMA, S.1    RADLWIMMER, F.B.2
  • 34
    • 0037434938 scopus 로고    scopus 로고
    • The spectral tuning in the short wavelength-sensitive type 2 pigments
    • YOKOYAMA, S., and T. TADA, 2003 The spectral tuning in the short wavelength-sensitive type 2 pigments. Gene 306: 91-98.
    • (2003) Gene , vol.306 , pp. 91-98
    • YOKOYAMA, S.1    TADA, T.2
  • 35
    • 20444422931 scopus 로고    scopus 로고
    • Elephants and human color-blind deuteranopes have identical sets of visual pigments
    • YOKOYAMA, S., N. TAKENAKA, D. W. AGNEW and J. SHOSHANI, 2005 Elephants and human color-blind deuteranopes have identical sets of visual pigments. Genetics 170: 335-344.
    • (2005) Genetics , vol.170 , pp. 335-344
    • YOKOYAMA, S.1    TAKENAKA, N.2    AGNEW, D.W.3    SHOSHANI, J.4
  • 36
    • 34249280953 scopus 로고    scopus 로고
    • A novel spectral tuning in the short wavelength-sensitive (SWS1 and SWS2) pigments of bluefin killifish (Lucania goodei)
    • YOKOYAMA, S., N. TAKENAKA and N. BLOW, 2007 A novel spectral tuning in the short wavelength-sensitive (SWS1 and SWS2) pigments of bluefin killifish (Lucania goodei). Gene 396: 196-202.
    • (2007) Gene , vol.396 , pp. 196-202
    • YOKOYAMA, S.1    TAKENAKA, N.2    BLOW, N.3
  • 37
    • 0024362631 scopus 로고
    • Effect of carboxylic acid side chains on the absorption maximum of visual pigments
    • ZHUKOVSKY, E. A., and D. D. OPRIAN, 1989 Effect of carboxylic acid side chains on the absorption maximum of visual pigments. Science 246: 928-930.
    • (1989) Science , vol.246 , pp. 928-930
    • ZHUKOVSKY, E.A.1    OPRIAN, D.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.