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Volumn 105, Issue 40, 2008, Pages 15393-15398

Mg2+-sensing mechanism of Mg2+ transporter MgtE probed by molecular dynamics study

Author keywords

Magnesium homeostasis; Molecular dynamics simulation

Indexed keywords

MAGNESIUM; ANTIPORTER; BACTERIAL PROTEIN; CARRIER PROTEIN; MGTE PROTEIN, BACTERIA; UNCLASSIFIED DRUG;

EID: 55749083717     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0802991105     Document Type: Article
Times cited : (56)

References (29)
  • 1
    • 33645748904 scopus 로고    scopus 로고
    • 2+ transporter
    • 2+ transporter. Nature 440:833-837.
    • (2006) Nature , vol.440 , pp. 833-837
    • Lunin, V.V.1
  • 2
    • 33746549925 scopus 로고    scopus 로고
    • Crystal structure of a divalent metal ion transporter CorA at 2.9 angstrom resolution
    • Eshaghi S, et al. (2006) Crystal structure of a divalent metal ion transporter CorA at 2.9 angstrom resolution. Science 313:354-357.
    • (2006) Science , vol.313 , pp. 354-357
    • Eshaghi, S.1
  • 3
    • 33748031116 scopus 로고    scopus 로고
    • 2+ homeostasis and the CorA translocation cycle
    • 2+ homeostasis and the CorA translocation cycle. EMBO J 25:3762-3773.
    • (2006) EMBO J , vol.25 , pp. 3762-3773
    • Payandeh, J.1    Pai, E.F.2
  • 5
    • 33847656116 scopus 로고    scopus 로고
    • How to gate an ion channel: Lessons from MthK
    • Chakrapani S, Perozo E (2007) How to gate an ion channel: Lessons from MthK. Nat Struct Mol Biol 14:180-182.
    • (2007) Nat Struct Mol Biol , vol.14 , pp. 180-182
    • Chakrapani, S.1    Perozo, E.2
  • 6
    • 33846106811 scopus 로고    scopus 로고
    • Inhibitory complex of the transmembrane ammonia channel, AmtB, and the cytosolic regulatory protein, GlnK, at 1.96 Å
    • Gruswitz F, O'Connell J, Stroud RM (2007) Inhibitory complex of the transmembrane ammonia channel, AmtB, and the cytosolic regulatory protein, GlnK, at 1.96 Å. Proc Natl Acad Sci USA 104:42-47.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 42-47
    • Gruswitz, F.1    O'Connell, J.2    Stroud, R.M.3
  • 7
    • 33846641311 scopus 로고    scopus 로고
    • The crystal structure of the Escherichia coli AmtB-GlnK complex reveals how GlnK regulates the ammonia channel
    • Conroy MJ, et al. (2007) The crystal structure of the Escherichia coli AmtB-GlnK complex reveals how GlnK regulates the ammonia channel. Proc Natl Acad Sci USA 104:1213-1218.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 1213-1218
    • Conroy, M.J.1
  • 8
    • 34548813656 scopus 로고    scopus 로고
    • Structure of acid-sensing ion channel 1 at 1.9A resolution and low pH
    • Jasti J, Furukawa H, Gonzales EB, Gouaux E (2007) Structure of acid-sensing ion channel 1 at 1.9A resolution and low pH. Nature 449:316-323.
    • (2007) Nature , vol.449 , pp. 316-323
    • Jasti, J.1    Furukawa, H.2    Gonzales, E.B.3    Gouaux, E.4
  • 10
    • 34548253368 scopus 로고    scopus 로고
    • Structure and mechanism of ametal-sensing regulatory RNA
    • Dann CE, et al. (2007) Structure and mechanism of ametal-sensing regulatory RNA. Cell 130:878-892.
    • (2007) Cell , vol.130 , pp. 878-892
    • Dann, C.E.1
  • 12
    • 16244421086 scopus 로고    scopus 로고
    • Functional characterization of the human solute carrier, SLC41A2
    • Goytain A, Quamme GA (2005) Functional characterization of the human solute carrier, SLC41A2. Biochem Biophys Res Commun 330:701-705.
    • (2005) Biochem Biophys Res Commun , vol.330 , pp. 701-705
    • Goytain, A.1    Quamme, G.A.2
  • 14
    • 27744463780 scopus 로고    scopus 로고
    • CBS domains: Structure, function, and pathology in human proteins
    • Ignoul S, Eggermont J (2005) CBS domains: Structure, function, and pathology in human proteins. Am J Physiol 289:C1369-C1378.
    • (2005) Am J Physiol , vol.289
    • Ignoul, S.1    Eggermont, J.2
  • 15
    • 25444467180 scopus 로고    scopus 로고
    • Cytoplasmic ATP-sensing domains regulate gating of skeletal muscle ClC-1 chloride channels
    • Bennetts B, et al. (2005) Cytoplasmic ATP-sensing domains regulate gating of skeletal muscle ClC-1 chloride channels. J Biol Chem 280:32452-32458.
    • (2005) J Biol Chem , vol.280 , pp. 32452-32458
    • Bennetts, B.1
  • 17
    • 33847286510 scopus 로고    scopus 로고
    • Structural determinants of human FANCF protein that function in the assembly of a DNA damage signaling complex
    • Kowal P, Gurtan AM, Stuckert P, D'Andrea AD, Ellenberger T (2007) Structural determinants of human FANCF protein that function in the assembly of a DNA damage signaling complex. J Biol Chem 282:2047-2055.
    • (2007) J Biol Chem , vol.282 , pp. 2047-2055
    • Kowal, P.1    Gurtan, A.M.2    Stuckert, P.3    D'Andrea, A.D.4    Ellenberger, T.5
  • 18
    • 0036316773 scopus 로고    scopus 로고
    • Magnesium chemistry and biochemistry
    • Maguire ME, Cowan JA (2002) Magnesium chemistry and biochemistry. Biometals 15:203-210.
    • (2002) Biometals , vol.15 , pp. 203-210
    • Maguire, M.E.1    Cowan, J.A.2
  • 19
    • 27344436659 scopus 로고    scopus 로고
    • Scalable molecular dynamics with NAMD
    • Phillips JC, et al. (2005) Scalable molecular dynamics with NAMD. J Comput Chem 26:1781-1802.
    • (2005) J Comput Chem , vol.26 , pp. 1781-1802
    • Phillips, J.C.1
  • 20
    • 0041784950 scopus 로고    scopus 로고
    • All-atom empirical potential for molecular modeling and dynamics studies of proteins
    • MacKerell AD, et al. (1998) All-atom empirical potential for molecular modeling and dynamics studies of proteins. J Phys Chem B 102:3586-3616.
    • (1998) J Phys Chem B , vol.102 , pp. 3586-3616
    • MacKerell, A.D.1
  • 21
    • 3142714765 scopus 로고    scopus 로고
    • Extending the treatment of backbone energetics in protein force fields: Limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations
    • Mackerell AD, Feig M, Brooks CL (2004) Extending the treatment of backbone energetics in protein force fields: Limitations of gas-phase quantum mechanics in reproducing protein conformational distributions in molecular dynamics simulations. J Comput Chem 25:1400-1415.
    • (2004) J Comput Chem , vol.25 , pp. 1400-1415
    • Mackerell, A.D.1    Feig, M.2    Brooks, C.L.3
  • 23
    • 48749148224 scopus 로고
    • Rattle - A velocity version of the shake algorithm for molecular-dynamics calculations
    • Andersen HC (1983) Rattle - A velocity version of the shake algorithm for molecular-dynamics calculations. J Comput Phys 52:24-34.
    • (1983) J Comput Phys , vol.52 , pp. 24-34
    • Andersen, H.C.1
  • 24
    • 36449007836 scopus 로고
    • Constant-pressure molecular-dynamics simulation - The Langevin piston method
    • Feller SE, Zhang YH, Pastor RW, Brooks BR (1995) Constant-pressure molecular-dynamics simulation - The Langevin piston method. J Chem Phys 103:4613-4621.
    • (1995) J Chem Phys , vol.103 , pp. 4613-4621
    • Feller, S.E.1    Zhang, Y.H.2    Pastor, R.W.3    Brooks, B.R.4
  • 25
    • 36449003554 scopus 로고
    • Constant-pressure molecular-dynamics algorithms
    • Martyna GJ, Tobias DJ, Klein ML (1994) Constant-pressure molecular-dynamics algorithms. J Chem Phys 101:4177-4189.
    • (1994) J Chem Phys , vol.101 , pp. 4177-4189
    • Martyna, G.J.1    Tobias, D.J.2    Klein, M.L.3
  • 26
    • 33846823909 scopus 로고
    • Particle mesh Ewald - An N.log(N) method for Ewald sums in large systems
    • Darden T, York D, Pedersen L (1993) Particle mesh Ewald - An N.log(N) method for Ewald sums in large systems. J Chem Phys 98:10089-10092.
    • (1993) J Chem Phys , vol.98 , pp. 10089-10092
    • Darden, T.1    York, D.2    Pedersen, L.3
  • 27
    • 0032006209 scopus 로고    scopus 로고
    • Systematic analysis of domain motions in proteins from conformational change: New results on citrate synthase and T4 lysozyme
    • Hayward S, Berendsen HJC (1998) Systematic analysis of domain motions in proteins from conformational change: New results on citrate synthase and T4 lysozyme. Proteins 30:144-154.
    • (1998) Proteins , vol.30 , pp. 144-154
    • Hayward, S.1    Berendsen, H.J.C.2
  • 28
    • 0347192985 scopus 로고    scopus 로고
    • X-ray structure of a protein-conducting channel
    • van den Berg B, et al. (2004) X-ray structure of a protein-conducting channel. Nature 427:36-44.
    • (2004) Nature , vol.427 , pp. 36-44
    • van den Berg, B.1
  • 29
    • 34547224262 scopus 로고    scopus 로고
    • Three-dimensional structure of a human connexin26 gap junction channel reveals a plug in the vestibule
    • Oshima A, Tani K, Hiroaki Y, Fujiyoshi Y, Sosinsky GE (2007) Three-dimensional structure of a human connexin26 gap junction channel reveals a plug in the vestibule. Proc Natl Acad Sci USA 104:10034-10039.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 10034-10039
    • Oshima, A.1    Tani, K.2    Hiroaki, Y.3    Fujiyoshi, Y.4    Sosinsky, G.E.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.