메뉴 건너뛰기




Volumn , Issue SUPPL.53, 2008, Pages

Sample preparation and in-solution protease digestion of proteins for chromatography-based proteomic analysis

Author keywords

MudPIT; Multidimensional protein identification technology; Protein; Proteolysis in solution; Proteomics; Trypsin digestion

Indexed keywords

PROTEINASE; PROTEIN; PROTEOME; ARGININE; ASPARAGINE; CATION EXCHANGE RESIN; CHYMOTRYPSIN; ELASTASE; LYSINE DECARBOXYLASE; PROPROTEIN CONVERTASE 9; PROTEINASE K; TRICHLOROACETIC ACID; TRYPSIN;

EID: 55249104730     PISSN: 19343655     EISSN: 19343663     Source Type: Journal    
DOI: 10.1002/0471140864.ps2306s53     Document Type: Review
Times cited : (10)

References (14)
  • 1
    • 33746500659 scopus 로고    scopus 로고
    • Proteomic analysis by multidimensional protein identification technology
    • Florens, L. and Washburn, M.P. 2006. Proteomic analysis by multidimensional protein identification technology. Methods Mol. Biol. 328:159-175.
    • (2006) Methods Mol. Biol. , vol.328 , pp. 159-175
    • Florens, L.1    Washburn, M.P.2
  • 3
    • 34249779529 scopus 로고    scopus 로고
    • Pervasive combinatorial modification of histone H3 in human cells
    • Garcia, B.A, Pesavento, J.J, Mizzen, C.A, and Kelleher, N.L. 2007. Pervasive combinatorial modification of histone H3 in human cells. Nat. Methods 4:487-489.
    • (2007) Nat. Methods , vol.4 , pp. 487-489
    • Garcia, B.A.1    Pesavento, J.J.2    Mizzen, C.A.3    Kelleher, N.L.4
  • 4
    • 33644856320 scopus 로고    scopus 로고
    • Effects of modified digestion schemes on the identification of proteins from complex mixtures
    • Klammer, A.A. andMacCoss, M.J. 2006. Effects of modified digestion schemes on the identification of proteins from complex mixtures. J. Proteome Res. 5:695-700.
    • (2006) J. Proteome Res. , vol.5 , pp. 695-700
    • Klammer, A.A.1    MacCoss, M.J.2
  • 7
    • 0036684101 scopus 로고    scopus 로고
    • Comparison of three directly coupled HPLC MS/MS strategies for identification of proteins from complex mixtures: Single-dimension LCMS/MS, 2-phase MudPIT, and 3-phase Mud-PIT
    • McDonald, W.H, Ohi, R, Miyamoto, D.T, Mitchison, T.J, and Yates, J.R. 2002. Comparison of three directly coupled HPLC MS/MS strategies for identification of proteins from complex mixtures: Single-dimension LCMS/MS, 2-phase MudPIT, and 3-phase Mud-PIT. Int. J. Mass Spectrom. 219:245-251.
    • (2002) Int. J. Mass Spectrom. , vol.219 , pp. 245-251
    • McDonald, W.H.1    Ohi, R.2    Miyamoto, D.T.3    Mitchison, T.J.4    Yates, J.R.5
  • 8
    • 0344737970 scopus 로고    scopus 로고
    • Mass spectrometry of intracellular and membrane proteins using cleavable detergents
    • Norris, J.L, Porter, N.A, and Caprioli, R.M. 2003. Mass spectrometry of intracellular and membrane proteins using cleavable detergents. Anal. Chem. 75:6642-6647.
    • (2003) Anal. Chem. , vol.75 , pp. 6642-6647
    • Norris, J.L.1    Porter, N.A.2    Caprioli, R.M.3
  • 9
    • 0035106351 scopus 로고    scopus 로고
    • Large-scale analysis of the yeast proteome by multidimensional protein identification technology
    • DOI 10.1038/85686
    • Washburn, M.P, Wolters, D, and Yates, J.R, 3rd. 2001. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat. Biotechnol. 19:242-247. (Pubitemid 32220565)
    • (2001) Nature Biotechnology , vol.19 , Issue.3 , pp. 242-247
    • Washburn, M.P.1    Wolters, D.2    Yates, J.R.3
  • 10
    • 0035582244 scopus 로고    scopus 로고
    • An automated multidimensional protein identification technology for shotgun proteomics
    • Wolters, D.A, Washburn, M.P, and Yates, J.R, 3rd. 2001. An automated multidimensional protein identification technology for shotgun proteomics. Anal. Chem. 73:5683-5690.
    • (2001) Anal. Chem. , vol.73 , pp. 5683-5690
    • Wolters, D.A.1    Washburn, M.P.2    Yates Iii., J.R.3
  • 11
    • 0038561131 scopus 로고    scopus 로고
    • Amethod for the comprehensive proteomic analysis of membrane proteins
    • Wu, C.C, MacCoss, M.J, Howell, K.E, and Yates, J.R, 3rd. 2003.Amethod for the comprehensive proteomic analysis of membrane proteins. Nat. Biotechnol. 21:532-538.
    • (2003) Nat. Biotechnol. , vol.21 , pp. 532-538
    • Wu, C.C.1    MacCoss, M.J.2    Howell, K.E.3    Yates Iii., J.R.4
  • 12
    • 0242291099 scopus 로고    scopus 로고
    • Enzyme-friendly, mass spectrometry-compatible surfactant for insolution enzymatic digestion of proteins
    • Yu, Y.Q, Gilar, M, Lee, P.J, Bouvier, E.S, and Gebler, J.C. 2003. Enzyme-friendly, mass spectrometry-compatible surfactant for insolution enzymatic digestion of proteins. Anal. Chem. 75:6023-6028.
    • (2003) Anal. Chem. , vol.75 , pp. 6023-6028
    • Yu, Y.Q.1    Gilar, M.2    Lee, P.J.3    Bouvier, E.S.4    Gebler, J.C.5
  • 13
    • 26444506068 scopus 로고    scopus 로고
    • Correlation of relative abundance ratios derived from peptide ion chromatograms and spectrum counting for quantitative proteomic analysis using stable isotope labeling
    • Zybailov, B, Coleman, M.K, Florens, L, and Washburn, M.P. 2005. Correlation of relative abundance ratios derived from peptide ion chromatograms and spectrum counting for quantitative proteomic analysis using stable isotope labeling. Anal. Chem. 77:6218-6224.
    • (2005) Anal. Chem. , vol.77 , pp. 6218-6224
    • Zybailov, B.1    Coleman, M.K.2    Florens, L.3    Washburn, M.P.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.