-
1
-
-
0026847379
-
Regulation of histone gene expression
-
Stein, G. S., Stein, J. L., van Wijnen, A. J., and Lian, J. B. (1992) Regulation of histone gene expression. Curr. Opin. Cell Biol. 4, 166-173.
-
(1992)
Curr. Opin. Cell Biol
, vol.4
, pp. 166-173
-
-
Stein, G.S.1
Stein, J.L.2
van Wijnen, A.J.3
Lian, J.B.4
-
2
-
-
33750516917
-
An architectural perspective of cell-cycle control at the G1/S phase cell-cycle transition
-
Stein, G. S., van Wijnen, A. J., Stein, J. L., Lian, J. B., Montecino, M., Zaidi, S. K., and Braastad, C. (2006) An architectural perspective of cell-cycle control at the G1/S phase cell-cycle transition. J. Cell. Physiol. 209, 706-710.
-
(2006)
J. Cell. Physiol
, vol.209
, pp. 706-710
-
-
Stein, G.S.1
van Wijnen, A.J.2
Stein, J.L.3
Lian, J.B.4
Montecino, M.5
Zaidi, S.K.6
Braastad, C.7
-
3
-
-
0242468997
-
The cyclin E/Cdk2 substrate p220(NPAT) is required for S-phase entry, histone gene expression, and Cajal body maintenance in human somatic cells
-
Ye, X., Wei, Y., Nalepa, G., and Harper, J. W. (2003) The cyclin E/Cdk2 substrate p220(NPAT) is required for S-phase entry, histone gene expression, and Cajal body maintenance in human somatic cells. Mol. Cell. Biol. 23, 8586-8600.
-
(2003)
Mol. Cell. Biol
, vol.23
, pp. 8586-8600
-
-
Ye, X.1
Wei, Y.2
Nalepa, G.3
Harper, J.W.4
-
4
-
-
0021111887
-
Coordinate regulation of multiple histone mRNAs during the cell cycle in HeLa cells
-
Plumb, M., Stein, J., and Stein, G. (1983) Coordinate regulation of multiple histone mRNAs during the cell cycle in HeLa cells. Nucleic Acids Res. 11, 2391-2410.
-
(1983)
Nucleic Acids Res
, vol.11
, pp. 2391-2410
-
-
Plumb, M.1
Stein, J.2
Stein, G.3
-
5
-
-
0023253198
-
Regulation of human histone gene expression: Transcriptional and posttranscriptional control in the coupling of histone messenger RNA stability with DNA replication
-
Baumbach, L. L., Stein, G. S., and Stein, J. L. (1987) Regulation of human histone gene expression: Transcriptional and posttranscriptional control in the coupling of histone messenger RNA stability with DNA replication. Biochemistry 26, 6178-6187.
-
(1987)
Biochemistry
, vol.26
, pp. 6178-6187
-
-
Baumbach, L.L.1
Stein, G.S.2
Stein, J.L.3
-
6
-
-
0020600551
-
Regulation of human histone gene expression: Kinetics of accumulation and changes in the rate of synthesis and in the half-lives of individual histone mRNAs during the HeLa cell cycle
-
Heintz, N., Sive, H. L., and Roeder, R. G. (1983) Regulation of human histone gene expression: Kinetics of accumulation and changes in the rate of synthesis and in the half-lives of individual histone mRNAs during the HeLa cell cycle. Mol. Cell. Biol. 3, 539-550.
-
(1983)
Mol. Cell. Biol
, vol.3
, pp. 539-550
-
-
Heintz, N.1
Sive, H.L.2
Roeder, R.G.3
-
7
-
-
0026355522
-
Regulation of histone mRNA in the unperturbed cell cycle: Evidence suggesting control at two posttranscriptional steps
-
Harris, M. E., Bohni, R., Schneiderman, M. H., Ramamurthy, L., Schumperli, D., and Marzluff, W. F. (1991) Regulation of histone mRNA in the unperturbed cell cycle: Evidence suggesting control at two posttranscriptional steps. Mol. Cell. Biol. 11, 2416-2424.
-
(1991)
Mol. Cell. Biol
, vol.11
, pp. 2416-2424
-
-
Harris, M.E.1
Bohni, R.2
Schneiderman, M.H.3
Ramamurthy, L.4
Schumperli, D.5
Marzluff, W.F.6
-
8
-
-
0026059584
-
Changes in the stability of a human H3 histone mRNA during the HeLa cell cycle
-
Morris, T. D., Weber, L. A., Hickey, E., Stein, G. S., and Stein, J. L. (1991) Changes in the stability of a human H3 histone mRNA during the HeLa cell cycle. Mol. Cell. Biol. 11, 544-553.
-
(1991)
Mol. Cell. Biol
, vol.11
, pp. 544-553
-
-
Morris, T.D.1
Weber, L.A.2
Hickey, E.3
Stein, G.S.4
Stein, J.L.5
-
9
-
-
0032826096
-
Formation of the 3′ end of histone mRNA
-
Dominski, Z., and Marzluff, W. F. (1999) Formation of the 3′ end of histone mRNA. Gene 239, 1-14.
-
(1999)
Gene
, vol.239
, pp. 1-14
-
-
Dominski, Z.1
Marzluff, W.F.2
-
10
-
-
34250653243
-
Formation of the 3′ end of histone mRNA: Getting closer to the end
-
Dominski, Z., and Marzluff, W. F. (2007) Formation of the 3′ end of histone mRNA: Getting closer to the end. Gene 396, 373-390.
-
(2007)
Gene
, vol.396
, pp. 373-390
-
-
Dominski, Z.1
Marzluff, W.F.2
-
11
-
-
0026734647
-
Overlapping and CpG methylation-sensitive protein-DNA interactions at the histone H4 transcriptional cell cycle domain: Distinctions between two human H4 gene promoters
-
van Wijnen, A. J., van den Ent, F. M., Lian, J. B., Stein, J. L., and Stein, G. S. (1992) Overlapping and CpG methylation-sensitive protein-DNA interactions at the histone H4 transcriptional cell cycle domain: Distinctions between two human H4 gene promoters. Mol. Cell. Biol. 12, 3273-3287.
-
(1992)
Mol. Cell. Biol
, vol.12
, pp. 3273-3287
-
-
van Wijnen, A.J.1
van den Ent, F.M.2
Lian, J.B.3
Stein, J.L.4
Stein, G.S.5
-
12
-
-
0242495688
-
Identification of HiNF-P, a key activator of cell cycle controlled histone H4 genes at the onset of S phase
-
Mitra, P., Xie, R. L., Medina, R., Hovhannisyan, H., Zaidi, S. K., Wei, Y., Harper, J. W., Stein, J. L., van Wijnen, A. J., and Stein, G. S. (2003) Identification of HiNF-P, a key activator of cell cycle controlled histone H4 genes at the onset of S phase. Mol. Cell. Biol. 23, 8110-8123.
-
(2003)
Mol. Cell. Biol
, vol.23
, pp. 8110-8123
-
-
Mitra, P.1
Xie, R.L.2
Medina, R.3
Hovhannisyan, H.4
Zaidi, S.K.5
Wei, Y.6
Harper, J.W.7
Stein, J.L.8
van Wijnen, A.J.9
Stein, G.S.10
-
13
-
-
34247517360
-
HiNF-P is a bifunctional regulator of cell cycle controlled histone H4 gene transcription
-
Mitra, P., Xie, R., Harper, J. W., Stein, J. L., Stein, G. S., and van Wijnen, A. J. (2007) HiNF-P is a bifunctional regulator of cell cycle controlled histone H4 gene transcription. J. Cell. Biochem. 101, 181-191.
-
(2007)
J. Cell. Biochem
, vol.101
, pp. 181-191
-
-
Mitra, P.1
Xie, R.2
Harper, J.W.3
Stein, J.L.4
Stein, G.S.5
van Wijnen, A.J.6
-
14
-
-
21744442244
-
NPAT pathway to histone H4 gene regulation at the G1/S phase cell cycle transition
-
NPAT pathway to histone H4 gene regulation at the G1/S phase cell cycle transition. Mol. Cell. Biol. 25, 6140-6153.
-
(2005)
Mol. Cell. Biol
, vol.25
, pp. 6140-6153
-
-
Miele, A.1
Braastad, C.D.2
Holmes, W.F.3
Mitra, P.4
Medina, R.5
Xie, R.6
Zaidi, S.K.7
Ye, X.8
Wei, Y.9
Harper, J.W.10
van Wijnen, A.J.11
Stein, J.L.12
Stein, G.S.13
-
16
-
-
0034665757
-
NPAT links cyclin E-Cdk2 to the regulation of replication-dependent histone gene transcription
-
Zhao, J., Kennedy, B. K., Lawrence, B. D., Barbie, D. A., Matera, A. G., Fletcher, J. A., and Harlow, E. (2000) NPAT links cyclin E-Cdk2 to the regulation of replication-dependent histone gene transcription. Genes Dev. 14, 2283-2297.
-
(2000)
Genes Dev
, vol.14
, pp. 2283-2297
-
-
Zhao, J.1
Kennedy, B.K.2
Lawrence, B.D.3
Barbie, D.A.4
Matera, A.G.5
Fletcher, J.A.6
Harlow, E.7
-
17
-
-
0034665635
-
Cell cycle-regulated phosphorylation of p220(NPAT) by cyclin E/Cdk2 in Cajal bodies promotes histone gene transcription
-
Ma, T., Van Tine, B. A., Wei, Y., Garrett, M. D., Nelson, D., Adams, P. D., Wang, J., Qin, J., Chow, L. T., and Harper, J. W. (2000) Cell cycle-regulated phosphorylation of p220(NPAT) by cyclin E/Cdk2 in Cajal bodies promotes histone gene transcription. Genes Dev. 14, 2298-2313.
-
(2000)
Genes Dev
, vol.14
, pp. 2298-2313
-
-
Ma, T.1
Van Tine, B.A.2
Wei, Y.3
Garrett, M.D.4
Nelson, D.5
Adams, P.D.6
Wang, J.7
Qin, J.8
Chow, L.T.9
Harper, J.W.10
-
18
-
-
34548472178
-
NPAT in human embryonic stem cells
-
NPAT in human embryonic stem cells. J. Cell. Physiol. 213, 9-17.
-
(2007)
J. Cell. Physiol
, vol.213
, pp. 9-17
-
-
Ghule, P.N.1
Becker, K.A.2
Harper, J.W.3
Lian, J.B.4
Stein, J.L.5
van Wijnen, A.J.6
Stein, G.S.7
-
19
-
-
27844577762
-
Coordinate control and selective expression of the full complement of replication-dependent histone H4 genes in normal and cancer cells
-
Holmes, W. F., Braastad, C. D., Mitra, P., Hampe, C., Doenecke, D., Albig, W., Stein, J. L., van Wijnen, A. J., and Stein, G. S. (2005) Coordinate control and selective expression of the full complement of replication-dependent histone H4 genes in normal and cancer cells. J. Biol. Chem. 280, 37400-37407.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 37400-37407
-
-
Holmes, W.F.1
Braastad, C.D.2
Mitra, P.3
Hampe, C.4
Doenecke, D.5
Albig, W.6
Stein, J.L.7
van Wijnen, A.J.8
Stein, G.S.9
-
20
-
-
7644244873
-
Functional characterization of a human histone gene cluster duplication
-
Braastad, C. D., Hovhannisyan, H., van Wijnen, A. J., Stein, J. L., and Stein, G. S. (2004) Functional characterization of a human histone gene cluster duplication. Gene 342, 35-40.
-
(2004)
Gene
, vol.342
, pp. 35-40
-
-
Braastad, C.D.1
Hovhannisyan, H.2
van Wijnen, A.J.3
Stein, J.L.4
Stein, G.S.5
-
21
-
-
33845629852
-
Establishment of histone gene regulation and cell cycle checkpoint control in human embryonic stem cells
-
Becker, K. A., Stein, J. L., Lian, J. B., van Wijnen, A. J., and Stein, G. S. (2007) Establishment of histone gene regulation and cell cycle checkpoint control in human embryonic stem cells. J. Cell. Physiol. 210, 517-526.
-
(2007)
J. Cell. Physiol
, vol.210
, pp. 517-526
-
-
Becker, K.A.1
Stein, J.L.2
Lian, J.B.3
van Wijnen, A.J.4
Stein, G.S.5
-
22
-
-
0031055676
-
Histones: Genetic diversity and tissue-specific gene expression
-
Doenecke, D., Albig, W., Bode, C., Drabent, B., Franke, K., Gavenis, K., and Witt, O. (1997) Histones: Genetic diversity and tissue-specific gene expression. Histochem. Cell Biol. 107, 1-10.
-
(1997)
Histochem. Cell Biol
, vol.107
, pp. 1-10
-
-
Doenecke, D.1
Albig, W.2
Bode, C.3
Drabent, B.4
Franke, K.5
Gavenis, K.6
Witt, O.7
-
23
-
-
35949003532
-
NPAT cell cycle signaling pathway controls non-histone target genes
-
NPAT cell cycle signaling pathway controls non-histone target genes. Cancer Res. 67, 10334-10342.
-
(2007)
Cancer Res
, vol.67
, pp. 10334-10342
-
-
Medina, R.1
van der Deen, M.2
Miele-Chamberland, A.3
Xie, R.L.4
van Wijnen, A.J.5
Stein, J.L.6
Stein, G.S.7
-
24
-
-
34548676565
-
Transcriptional activation of the histone nuclear factor P (HiNF-P) gene by HiNF-P and its cyclin E/CDK2 responsive co-factor p220(NPAT) defines a novel autoregulatory loop at the G1/S phase transition
-
Xie, R. L., Liu, L., Mitra, P., Stein, J. L., van Wijnen, A. J., and Stein, G. S. (2007) Transcriptional activation of the histone nuclear factor P (HiNF-P) gene by HiNF-P and its cyclin E/CDK2 responsive co-factor p220(NPAT) defines a novel autoregulatory loop at the G1/S phase transition. Gene 402, 94-102.
-
(2007)
Gene
, vol.402
, pp. 94-102
-
-
Xie, R.L.1
Liu, L.2
Mitra, P.3
Stein, J.L.4
van Wijnen, A.J.5
Stein, G.S.6
-
25
-
-
34548509438
-
The interactome of the histone gene regulatory factor HiNF-P suggests novel cell cycle related roles in transcriptional control and RNA processing
-
Miele, A., Medina, R., van Wijnen, A. J., Stein, G. S., and Stein, J. L. (2007) The interactome of the histone gene regulatory factor HiNF-P suggests novel cell cycle related roles in transcriptional control and RNA processing. J. Cell. Biochem. 102, 136-148.
-
(2007)
J. Cell. Biochem
, vol.102
, pp. 136-148
-
-
Miele, A.1
Medina, R.2
van Wijnen, A.J.3
Stein, G.S.4
Stein, J.L.5
-
26
-
-
1342306393
-
Sequence-specific transcriptional repression by an MBD2-interacting zinc finger protein MIZF
-
Sekimata, M., and Homma, Y. (2004) Sequence-specific transcriptional repression by an MBD2-interacting zinc finger protein MIZF. Nucleic Acids Res. 32, 590-597.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 590-597
-
-
Sekimata, M.1
Homma, Y.2
-
27
-
-
33745179207
-
-
Huntley, S., Baggott, D. M., Hamilton, A. T., Tran.Gyamfi, M., Yang, S., Kim, J., Gordon, L., Branscomb, E., and Stubbs, L. (2006) A comprehensive catalog of human KRAB-associated zinc finger genes: Insights into the evolutionary history of a large family of transcriptional repressors. Genome Res. 16, 669-677.
-
Huntley, S., Baggott, D. M., Hamilton, A. T., Tran.Gyamfi, M., Yang, S., Kim, J., Gordon, L., Branscomb, E., and Stubbs, L. (2006) A comprehensive catalog of human KRAB-associated zinc finger genes: Insights into the evolutionary history of a large family of transcriptional repressors. Genome Res. 16, 669-677.
-
-
-
-
28
-
-
0028040875
-
The POZ domain: A conserved protein-protein interaction motif
-
Bardwell, V. J., and Treisman, R. (1994) The POZ domain: A conserved protein-protein interaction motif. Genes Dev. 8, 1664-1677.
-
(1994)
Genes Dev
, vol.8
, pp. 1664-1677
-
-
Bardwell, V.J.1
Treisman, R.2
-
29
-
-
0025920615
-
The evolutionarily conserved Kruppel-associated box domain defines a subfamily of eukaryotic multi-fingered proteins
-
Bellefroid, E. J., Poncelet, D. A., Lecocq, P. J., Revelant, O., and Martial, J. A. (1991) The evolutionarily conserved Kruppel-associated box domain defines a subfamily of eukaryotic multi-fingered proteins. Proc. Natl. Acad. Sci. U.S.A. 88, 3608-3612.
-
(1991)
Proc. Natl. Acad. Sci. U.S.A
, vol.88
, pp. 3608-3612
-
-
Bellefroid, E.J.1
Poncelet, D.A.2
Lecocq, P.J.3
Revelant, O.4
Martial, J.A.5
-
30
-
-
0029115782
-
Isolation and characterization of a novel zinc-finger protein with transcription repressor activity
-
Williams, A. J., Khachigian, L. M., Shows, T., and Collins, T. (1995) Isolation and characterization of a novel zinc-finger protein with transcription repressor activity. J. Biol. Chem. 270, 22143-22152.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 22143-22152
-
-
Williams, A.J.1
Khachigian, L.M.2
Shows, T.3
Collins, T.4
-
31
-
-
0029806268
-
-
Grimes, H. L., Chan, T. O., Zweidler.McKay, P. A., Tong, B., and Tsichlis, P. N. (1996) The Gfi-1 proto-oncoprotein contains a novel transcriptional repressor domain, SNAG, and inhibits G1 arrest induced by interleukin-2 withdrawal. Mol. Cell. Biol. 16, 6263-6272.
-
Grimes, H. L., Chan, T. O., Zweidler.McKay, P. A., Tong, B., and Tsichlis, P. N. (1996) The Gfi-1 proto-oncoprotein contains a novel transcriptional repressor domain, SNAG, and inhibits G1 arrest induced by interleukin-2 withdrawal. Mol. Cell. Biol. 16, 6263-6272.
-
-
-
-
32
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Plainview, NY
-
Sambrook, J., and Russell, D. W. (2001) Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory Press, Plainview, NY.
-
(2001)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Russell, D.W.2
-
33
-
-
0000323737
-
A unified approach to mixed linear models
-
McLean, R. A., Sanders, W. L., and Stroup, W. W. (1991) A unified approach to mixed linear models. Am. Stat. 45, 54-64.
-
(1991)
Am. Stat
, vol.45
, pp. 54-64
-
-
McLean, R.A.1
Sanders, W.L.2
Stroup, W.W.3
-
34
-
-
0016919827
-
Restricted maximum likelihood (REML) estimation of variance components in the mixed model
-
Corbeil, R. R., and Searle, S. R. (1976) Restricted maximum likelihood (REML) estimation of variance components in the mixed model. Technometrics 18, 31-38.
-
(1976)
Technometrics
, vol.18
, pp. 31-38
-
-
Corbeil, R.R.1
Searle, S.R.2
-
35
-
-
55249086846
-
-
SAS Institute Inc, 1997 The MIXED Procedure. SAS/STAT Software: Changes and Enhancements through Release 6.12, SAS Institute, Inc, Cary, NC
-
SAS Institute Inc. (1997) The MIXED Procedure. SAS/STAT Software: Changes and Enhancements through Release 6.12, SAS Institute, Inc., Cary, NC.
-
-
-
-
36
-
-
84952202016
-
The factor analytic approach to simultaneous inference in the general linear model
-
Hsu, J. C. (1992) The factor analytic approach to simultaneous inference in the general linear model. J. Comput. Graphical Stat. 1, 168.
-
(1992)
J. Comput. Graphical Stat
, vol.1
, pp. 168
-
-
Hsu, J.C.1
-
38
-
-
29244442047
-
-
SAS Institute Inc, SAS Institute Inc, Gary, NC
-
SAS Institute Inc. (2006) Base SAS 9.1.3 Procedures Guide, SAS Institute Inc., Gary, NC.
-
(2006)
Base SAS 9.1.3 Procedures Guide
-
-
-
39
-
-
0002511466
-
GeneDoc: Analysis and visualization of genetic variation
-
Nicholas, K. B., Nicholas, H. B., Jr., and Deerfield, D. W. (1997) GeneDoc: Analysis and visualization of genetic variation. EMBNEW NEWS 4, 14.
-
(1997)
EMBNEW NEWS
, vol.4
, pp. 14
-
-
Nicholas, K.B.1
Nicholas Jr., H.B.2
Deerfield, D.W.3
-
40
-
-
38549141229
-
Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre
-
Bennett-Lovsey, R. M., Herbert, A. D., Sternberg, M. J., and Kelley, L. A. (2008) Exploring the extremes of sequence/structure space with ensemble fold recognition in the program Phyre. Proteins 70, 611-625.
-
(2008)
Proteins
, vol.70
, pp. 611-625
-
-
Bennett-Lovsey, R.M.1
Herbert, A.D.2
Sternberg, M.J.3
Kelley, L.A.4
-
41
-
-
0034595501
-
Enhanced genome annotation using structural profiles in the program 3D-PSSM
-
Kelley, L. A., MacCallum, R. M., and Sternberg, M. J. (2000) Enhanced genome annotation using structural profiles in the program 3D-PSSM. J. Mol. Biol. 299, 499-520.
-
(2000)
J. Mol. Biol
, vol.299
, pp. 499-520
-
-
Kelley, L.A.1
MacCallum, R.M.2
Sternberg, M.J.3
-
42
-
-
0034999879
-
All in the family: The BTB/POZ, KRAB, and SCAN domains
-
Collins, T., Stone, J. R., and Williams, A. J. (2001) All in the family: The BTB/POZ, KRAB, and SCAN domains. Mol. Cell. Biol. 21, 3609-3615.
-
(2001)
Mol. Cell. Biol
, vol.21
, pp. 3609-3615
-
-
Collins, T.1
Stone, J.R.2
Williams, A.J.3
|