A region of barley chromosome 6H harbors multiple major genes associated with net type net blotch resistance

Theoretical and Applied Genetics

Volumn 117, Issue 8, 2008, Pages 1261-1270

  Abu Qamar, M ^a   Liu, Z H ^a   Faris, J D ^b   Chao, S ^b   Edwards, M C ^b   Lai, Z ^a   Franckowiak, J D ^a,c   Friesen, T L ^a,b  

^a NORTH DAKOTA STATE UNIVERSITY   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c Hermitage Research Station   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOMES; GRAIN (AGRICULTURAL PRODUCT); PORTS AND HARBORS;

BLOTCH RESISTANCES; DH LINES; DIFFERENTIAL REACTIONS; DOUBLED HAPLOID LINES; GERMPLASM; GROWING REGIONS; MOLECULAR MARKERS; PARENTAL LINES; RESISTANCE ALLELES; RESISTANCE GENES;

GENES;

MICROSATELLITE DNA; PLANT DNA;

ARTICLE; ASCOMYCETES; BARLEY; CHROMOSOME MAP; CROSS BREEDING; GENETIC MARKER; GENETIC POLYMORPHISM; GENETICS; INNATE IMMUNITY; MICROBIOLOGY; PATHOGENICITY; PLANT CHROMOSOME; PLANT DISEASE; PLANT GENE;

ASCOMYCOTA; CHROMOSOME MAPPING; CHROMOSOMES, PLANT; CROSSES, GENETIC; DNA, PLANT; GENES, PLANT; GENETIC MARKERS; HORDEUM; IMMUNITY, INNATE; MICROSATELLITE REPEATS; PLANT DISEASES; POLYMORPHISM, GENETIC;

HORDEUM; PYRENOPHORA TERES F. TERES;

EID: 55149113040     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-008-0860-x     Document Type: Article

References (44)

1. SM Aljanabi I Martinez 1997 Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques Nucleic Acids Res 25 20 4692 4693
2. HE Bockelman EL Sharp RF Eslick 1977 Trisomic analysis of genes for resistance to scald and net blotch in several barley cultivars Can J Bot 55 2142 2148
3. M Cakir S Gupta GJ Platz GA Ablett R Loughman LC Emebiri D Poulsen CD Li RCM Lance NW Galway MGK Jones R Appels 2003 Mapping and validation of the genes for resistance to Pyrenophora teres f. teres in barley (Hordeum vulgare L.) Aust J Agric Res 54 1369 1377
4. S Chao W Zhang J Dubcovsky M Sorrells 2007 Evaluation of genetic diversity and genome-wide linkage disequilibrium among U.S. wheat (Triticum aestivum L.) germplasm representing different market classes Crop Sci 47 1018 1030
5. MG Cromey RA Parkes 2003 Pathogenic variation in Drechslera teres in New Zealand New Zealand Plant Pro 56 251 256
6. P Devaux A Kilian A Kleinhofs 1995 Comparative mapping of the barley genome with male and female recombination-derived, doubled haploid populations Mol Gen Genet 249 600 608
7. A Douiyssi DC Rasmusson AP Roelfs 1998 Responses of barley cultivars and lines to isolates of Pyrenophora teres Plant Dis 82 316 321
8. LC Emebiri G Platz DB Moody 2005 Disease resistance genes in a doubled haploid population of two-rowed barley segregating for malting quality attributes Aust J Agric Res 56 49 56
9. JD Faris KM Haen BS Gill 2000 Saturation mapping of a gene rich recombination hot spot region in wheat Genetics 154 823 835
10. HH Flor 1942 Inheritance of pathogenicity in Melampsora lini Phytopathology 32 653 668
11. TL Friesen JD Faris Z Lai BJ Steffenson 2006 Identification and chromosomal location of major genes for resistance to Pyrenophora teres in a barley doubled haploid population Genome 409 855 859
12. TL Friesen SW Meinhardt JD Faris 2007 The Stagonospora nodorum-wheat pathosystem involves multiple proteinaceous host-selective toxins and corresponding host sensitivity genes that interact in an inverse gene-for-gene manner Plant J 51 681 692
13. TL Friesen JD Faris PS Solomon RP Oliver 2008 Host specific toxins: effectors of necrotrophic pathogenicity Cell Microbiol 10 1421 1428
14. A Graner A Jahoor J Schondelmaier H Siedler K Pillen G Fischbeck G Wenzel RG Herrmann 1991 Construction of an RFLP map of barley Theor Appl Genet 83 250 256
15. TS Grewal BG Rossnagel CJ Pozniak GJ Scoles 2008 Mapping quantitative trait loci associated with barley net blotch resistance Theor Appl Genet 116 529 539
16. S Gupta R Loughman 2001 Current virulence of Pyrenophora teres on barley in Western Australia Plant Dis 85 960 966
17. M Heun AE Kennedy JA Anderson NLV Lapitan ME Sorrells SD Tanksley 1991 Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34 437 447
18. KM Ho A Tekauz TM Choo RA Martin 1996 Genetic studies on net blotch resistance in a barley cross Can J Plant Sci 76 4 715 720
19. G Künzel L Korzun A Meister 2000 Cytologically integrated physical restriction fragment length polymorphism maps for the barley genome based on translocation breakpoints Genetics 154 397 412
20. Z Lai JD Faris JJ Weiland BJ Steffenson TL Friesen 2007 Genetic mapping of Pyrenophora teres f teres genes conferring avirulence on barley Fungal Genet Biol 44 323 329
21. L Lamari SE Strelkov A Yahyaoui RB Smith 2003 The identification of two races of Pyrenophora tritici-repentis from the host center of diversity confirms a one-to-one relationship in tan spot of wheat Phytopathology 93 391 396
22. ES Lander P Green J Abrahamson A Barlow MJ Daly SE Lincoln L Newberg 1987 Mapmaker: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations Genomics 1 174 181
23. ZH Liu JA Anderson J Hu TL Friesen JB Rasmussen JD Faris 2005 A wheat intervarietal genetic linkage map based on microsatelite and target region amplified polymorphism markers and its utility for detecting quantitative trait loci Theor Appl Genet 111 782 794
24. ZQ Ma NLV Lapitan B Steffenson 2004 QTL mapping of net blotch resistance genes in a doubled-haploid population of six-rowed barley Euphytica 137 291 296
25. O Manninen R Kalendar J Robinson AH Schulman 2000 Application of BARE-1 retrotransposon markers to the mapping of a major resistance gene for net blotch in barley Mol Gen Genet 264 325 334
26. Mathre DE (1997) Compendium of barley diseases, second edition. The American Phytopathological Society. APS Press, St. Paul
27. JC Nelson 1997 QGENE: software for marker-based genomic analysis and breeding Mol Breed 3 239 245
28. H Raman GJ Platz KJ Chalmers R Raman BJ Read AR Barr DB Moody 2003 Mapping of genetic regions associated with net form of net blotch resistance in barley Aust J Agric Res 54 1359 1367
29. L Ramsay M Macaulay S Degli-Ivanissevich K MacLean L Cardle J Fuller KJ Edwards S Tuvesson M Morgante A Massari E Maestri N Marmiroli T Sjakste M Ganal W Powell R Waugh 2000 A simple sequence repeat-based linkage map of barley Genetics 156 1997 2005
30. HS Randhawa M Dilbirligi D Sidhu M Erayman D Sandhu S Bondareva S Chao GR Lazo OD Anderson Miftahudin JP Gustafson B Echalier LL Qi BS Gill ED Akhunov J Dvořák AM Linkiewicz A Ratnasiri J Dubcovsky CE Bermudez-Kandianis RA Greene ME Sorrells EJ Conley JA Anderson JH Peng NLV Lapitan KG Hossain V Kalavacharla SF Kianian MS Pathan HT Nguyen TR Endo TJ Close PE McGuire CQ Qualset KS Gill 2004 Deletion mapping of homoeologous group 6-specific wheat expressed sequence tags Genetics 168 677 686
31. K Richter J Schondelmaier C Jung 1998 Mapping of quantitative trait loci affecting Drechslera teres resistance in barley with molecular markers Theor Appl Genet 97 1225 1234
32. N Rostoks S Mudie L Cardle J Russell L Ramsay A Booth JT Svensson SI Wanamaker H Walia EM Rodriguez PE Hedley H Liu J Morris TJ Close DF Marshall R Waugh 2005 Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress Mol Genet Genomics 274 515 527
33. N Rozen H Skaletsky 2000 Primer3 on the WWW for general users and for biologist programmers Methods Mol Biol 132 365 386
34. CW Schaller 1955 Inheritance of resistance to net blotch of barley Phytopathology 45 174 176
35. WA Shipton TN Khan WJR Boyd 1973 Net blotch of barley Rev Plant Pathol 52 269 290
36. BJ Steffenson RK Webster 1992 Quantitative resistance to Pyrenophora teres in barley Phytopathology 82 407 411
37. BJ Steffenson RK Webster LF Jackson 1991 Reduction in yield loss using incomplete resistance to Pyrenophora teres f teres in barley Plant Dis 75 96 100
38. BJ Steffenson PM Hayes A Kleinhofs 1996 Genetics of seedling and adult plant resistance to net blotch (Pyrenophora teres f. teres) and spot blotch (Cochliobolus sativus) in barley Theor Appl Genet 92 552 558
39. Steffenson B, Pederson J, Pederson V (1999) Common barley diseases in North Dakota. Extension Bulletin, NDSU Ext. Service
40. N Stein M Prasad U Scholz T Thiel H Zhang M Wolf R Kota RK Varshney D Perovic I Grosse A Graner 2007 A 1,000-loci transcript map of the barley genome: new anchoring points for integrative grass genomics Theor Appl Genet 114 823 829
41. A Tekauz 1985 A numerical scale to classify reactions of barley to Pyrenophora teres Can J Plant Pathol 7 181 183
42. JJ Weiland BJ Steffenson RD Cartwright RK Webster 1999 Identification of molecular genetic markers in Pyrenophora teres f. teres associated with low virulence on 'Harbin' barley Phytopathology 89 176 181
43. TJ Wolpert LD Dunkle LM Ciuffetti 2002 Host-selective toxins and avirulence determinants: what's in a name Annu Rev Phytopathol 40 251 285
44. H-L Wu BJ Steffenson Y Li AE Oleson S Zhong 2003 Genetic variation for virulence and RFLP markers in Pyrenophora teres Can J Plant Pathol 25 82 90