Corrigendum to "Selection and evaluation of housekeeping genes for haemocytes of soft-shell clams (Mya arenaria) challenged with Vibrio splendidus" [J. Invertebr. Pathol. 99 (2008) 326-331] (DOI:10.1016/j.jip.2008.08.002);Selection and evaluation of housekeeping genes for haemocytes of soft-shell clams (Mya arenaria) challenged with Vibrio splendidus

Journal of Invertebrate Pathology

Volumn 99, Issue 3, 2008, Pages 326-331

  Araya, Mebrahtu T ^a   Siah, Ahmed ^a   Mateo, Dante ^a   Markham, Frederick ^a   McKenna, Patty ^a   Johnson, Gerry ^a   Berthe, Franck C J ^a,b  

^a UNIVERSITY OF PRINCE EDWARD ISLAND   (Canada)

^b EUROPEAN FOOD SAFETY AUTHORITY   (Italy)

Author keywords

Haemocytes; Housekeeping genes; Mya arenaria; Vibrio splendidus

Indexed keywords

BIVALVIA; MYA; MYA ARENARIA; VIBRIO; VIBRIO SPLENDIDUS;

EID: 54849406539     PISSN: 00222011     EISSN: 10960805     Source Type: Journal    
DOI: 10.1016/j.jip.2009.07.007     Document Type: Erratum

References (38)

1. Arenz A., Stojicic N., Lau P., Hellweg C.E., and Baumstark-Khan C. Suitability of commonly used housekeeping genes in gene expression studies for space radiation research. Adv. Space Res. 39 (2007) 1050-1055
2. Barber R.D., Harmer D.W., Coleman R.A., and Clark B.J. GAPDH as a housekeeping gene: analysis of GAPDH mRNA expression in a panel of 72 human tissues. Physiol. Genomics 21 (2005) 389-395
3. Bas A., Forsberg G., Hammarstrom S., and Hammarstrom M.L. Utility of the housekeeping genes 18S rRNA, beta-actin and glyceraldehyde-3-phosphate-dehydrogenase for normalization in real-time quantitative reverse transcriptase-polymerase chain reaction analysis of gene expression in human T lymphocytes. Scand. J. Immunol. 59 (2004) 566-573
4. Beckmann N., Morse M.P., and Moore C.M. Comparative study of phagocytosis in normal and diseased hemocytes of the bivalve mollusc Mya arenaria. J. Invertebr. Pathol. 59 (1992) 124-132
5. Bohle K., Jungebloud A., Göcke Y., Dalpiaz A., Cordes C., Horn H., and Hempela D.C. Selection of reference genes for normalisation of specific gene quantification data of Aspergillus niger. J. Biotechnol. 132 (2007) 353-358
6. Buggé D.M., Hégaret H., Wikfors G.H., and Allam B. Oxidative burst in hard clam (Mercenaria mercenaria) haemocytes. Fish Shellfish Immunol. 23 (2006) 188-196
7. Cellura C., Toubiana M., Parrinello N., and Roch P. HSP70 gene expression in Mytilus galloprovincialis hemocytes is triggered by moderate heat shock and Vibrio anguillarum, but not by V. splendidus or Micrococcus lysodeikticus. Dev. Comp. Immunol. 30 (2006) 984-997
8. Deindl E., Boengler K., van Royen N., and Schaper W. Differential expression of GAPDH and beta3-actin in growing collateral arteries. Mol. Cell. Biochem. 236 (2002) 139-146
9. Delaporte M., Synard S., Pariseau J., McKenna P., Tremblay R., Davidson J., and Berthe F.C.J. Assessment of haemic neoplasia in different soft shell clam Mya arenaria populations from eastern Canada by flow cytometry. J. Invertebr. Pathol. 98 (2008) 190-197
10. Dheda K., Huggett J.F., Bustin S.A., Johnson M.A., Rook G., and Zumla A. Validation of housekeeping genes for normalizing RNA expression in real-time PCR. BioTechniques 37 (2004) 112-119
11. Dondero F., Piacentini L., Marsano F., Rebelo M., Vergani L., Venier P., and Viarengo A. Gene transcription profiling in pollutant exposed mussels (Mytilus spp.) using a new low-density oligonucleotide microarray. Gene 376 (2006) 24-36
12. Finley D.J. Signal Transduction. An alternative to destruction. Nature 412 (2001) 283-286
13. García-Vallejo J.J., Van het Hof B., Robben J., Van Wijk J.A.E., Van Die I., Joziasse D.H., and Van Dijk W. Approach for defining endogenous reference genes in gene expression experiments. Anal. Biochem. 329 (2004) 293-299
14. Gunsch C.K., Kinney K.A., Szaniszlo P.J., and Whitman C.P. Quantification of homogentisate-1,2-dioxygenase expression in a fungus degrading ethylbenzene. J. Microbiol. Methods 67 (2006) 257-265
15. Hansen M.C., Nielsen A.K., Molin S., Hammer K., and Kilstrup M. Changes in rRNA levels during stress invalidates results from mRNA blotting: flourescence in situ rRNA hybridization permits renormalization for estimation of cellular mRNA levels. J. Bacteriol. 183 (2001) 4747-4751
16. He N., Liu H., and Xu X. Identification of genes involved in the response of haemocytes of Penaeus japonicus by suppression subtractive hybridization (SSH) following microbial challenge. Fish Shellfish Immunol. 17 (2004) 121-128
17. He N., Qin Q., and Xu X. Differential profile of genes expressed in hemocytes of white spot syndrome virus-resistant shrimp (Penaeus japonicus) by combining suppression subtractive hybridization and differential hybridization. Antiviral Res. 66 (2005) 39-45
18. Huang G., Liu H., Han Y., Fan L., Zhang Q., Liu J., Yu X., Zhang L., Chen S., Dong M., Wang L., and Xu A. Profile of acute immune response in Chinese amphioxus upon Staphylococcus aureus and Vibrio parahaemolyticus infection. Dev. Comp. Immunol. 31 (2007) 1013-1023
19. Huggett J., Dheda K., Bustin S., and Zumla A. Real-time RT-PCR normalisation; strategies and considerations. Genes Immun. 6 (2005) 279-284
20. Ingerslev H.C., Pettersen E.F., Jakobsen R.A., Petersen C.B., and Wergeland H.I. Expression profiling and validation of reference gene candidates in immune relevant tissues and cells from Atlantic salmon (Salmo salarL.). Mol. Immunol. 43 (2006) 1194-1201
21. Labreuche Y., Lambert C., Soudant P., Boulo V., Huvet A., and Nicolas J.L. Cellular and molecular haemocyte responses of the Pacific oyster, Crassostrea gigas, following bacterial infection with Vibrio aestuarianus strain 01/32. Microbes Infect. 8 (2006) 2715-2724
22. Lockyer A.E., Spinks J., Noble L.R., Rollinson D., and Jones C.S. Identification of genes involved in interactions between Biomphalaria glabrata and Schistosoma mansoni by suppression subtractive hybridization. Mol. Biochem. Parasitol. 151 (2007) 18-27
23. Marques C., Pereira P., Taylor A., Liang J.N., Reddy V.N., Szweda L.I., and Shang F. Ubiquitin-dependent lysosomal degradation of the HNE-modified proteins in lens epithelial cells. FASEB J. 18 (2004) 1424-1426
24. McDonagh B., and Sheehan D. Redox proteomics in the blue mussel Mytilus edulis: carbonylation is not a pre-requisite for ubiquitination in acute free radical-mediated oxidative stress. Aquat. Toxicol. 79 (2006) 325-333
25. Mitta G., Vandenbulcke F., and Roch P. Original involvement of antimicrobial peptides in mussel innate immunity. Minreview: FEBS Lett. 486 (2000) 185-190
26. Mogal A., and Abdulkadir S.A. Effects of histone deacetylase inhibitor (HDACi); trichostatin-A (TSA) on the expression of housekeeping genes. Mol. Cell. Probes 20 (2006) 81-86
27. Nicot N., Hausman J.F., Hoffmann L., and Evers D. Housekeeping gene selection for real-time RT-PCR normalization in potato during biotic and abiotic stress. J. Exp. Bot. 56 (2005) 2907-2914
28. Pan D., He N., Yang Z., Liu H., and Xu X. Differential gene expression profile in hepatopancreas of WSSV-resistant shrimp (Penaeus japonicus) by suppression subtractive hybridization. Dev. Comp. Immunol. 29 (2005) 103-112
29. Pfaffl M.W., Tichopad A., Prgomet C., and Neuvians T. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: Bestkeeper-Excel-based tool using pair-wise correlations. Biotechnol. Lett. 26 (2004) 509-515
30. Roch P. Defence mechanisms and disease prevention in farmed marine invertebrates. Aquaculture 172 (1999) 125-145
31. Rubie C., Kempf K., Hans J., Su T., Tilton B., Georg T., Brittner B., Ludwig B., and Schilling M. Housekeeping gene variability in normal and cancerous colorectal, pancreatic, esophageal, gastric and hepatic tissues. Mol. Cell. Probes 19 (2005) 101-109
32. Siah A., Masson R., Loup B., Bultelle F., Pellerin J., Leboulenger F., and Danger J.M. Receptor activated C kinase is down-regulated in the male gonad of the marine bivalve mollusc Mya arenaria exposed to tributyltin (TBT). Aquat. Toxicol. 83 (2007) 295-305
33. Siah A., Dohoo C., Mckenna P., Delaporte M., and Berthe F.C.J. Selecting a set of housekeeping genes for quantitative real-time PCR in normal and tetraploid haemocytes of soft-shell clams, Mya arenaria. Fish Shellfish Immunol. 25 (2008) 202-207
34. Takai Y., Takuya S., and Takashi M. Small GTP-binding proteins. Physiol. Rev. 81 (2001) 153-208
35. Tang R., Dodd A., Lai D., McNabb W.C., and Love D.R. Validation of zebrafish (Danio rerio) reference genes for quantitative real-time RT-PCR normalization. Acta Biochim. Biophys. Sin. 39 (2007) 384-390
36. Vandesompele J., De Preter K., Pattyn F., Poppe B., Van Roy N., De Paepe A., and Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3 (2002) 0034.1-0034.11
37. Waechter M., Le Roux F., Nicolas J., Marissal E., and Berthe F. Characterisation of Crassostrea gigas spat pathogenic bacteria. CR Biol. 325 (2002) 231-238
38. Yan H., and Liou R. Selection of internal control genes for real-time quantitative RT-PCR assays in the oomycete plant pathogen Phytophthora parasitica. Fungal Genet. Biol. 43 (2006) 430-438