High allozyme diversity and unidirectional linear migration patterns within a population of tetraploid Isoetes sinensis, a rare and endangered pteridophyte

Aquatic Botany

Volumn 90, Issue 1, 2009, Pages 52-58

  Chen, Yuan Yuan ^a,b   Yang, Wei ^a,b   Li, Wei ^a   Li, Zuo Zhou ^a   Huang, Hong Wen ^a  

^a Wuhan Institute of Botany Chinese Academy of Sciences   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

Allotetraploid; Genetic diversity; Hydrochory; Isoetes; Riparian plant; Unidirectional migration

Indexed keywords

ALLOZYME; ENDANGERED SPECIES; FERN; GENE FLOW; GENETIC VARIATION; HABITAT FRAGMENTATION; HYDROCHORY; MIGRATION; POLYMORPHISM; POPULATION SIZE; PTERIDOPHYTE; RARITY; RECRUITMENT (POPULATION DYNAMICS); RIPARIAN VEGETATION;

ASIA; CHINA; EURASIA; FAR EAST; XINAN RIVER;

FILICOPHYTA; ISOETACEAE; ISOETALES; ISOETES; ISOETES SINENSIS; PTERIDOPHYTA;

EID: 54249105798     PISSN: 03043770     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.aquabot.2008.05.008     Document Type: Article

References (73)

1. Akimoto M., Shimamoto Y., and Morishima H. Population genetic structure of wild-rice Oryza glumaepatula distributed in the Amazon flood area influenced by its life history traits. Mol. Ecol. 7 (1998) 1371-1381
2. Allen G.A., and Eccleston C.L. Genetic resemblance of allotetraploid Aster ascendens to its diploid progenitors A. falcatus and A. occidentalis. Can. J. Bot. 76 (1998) 338-344
3. Arft A.M., and Ranker T.A. Allopolyploid origin and population genetics of the rare orchid Spiranthes diluvialis. Am. J. Bot. 85 (1998) 110-122
4. Brown A.H.D., and Young A.G. Genetic diversity in tetraploid populations of the endangered daisy Rutidosis leptorrhynchoides and implications for its conservation. Heredity 85 (2000) 122-129
5. Caplen C.A., and Werth C.R. Isozymes of the Isoetes riparia complex. I. Genetic variation and relatedness of diploid species. Syst. Bot. 25 (2000) 235-259
6. Caplen C.A., and Werth C.R. Isozymes of the Isoetes riparia complex. II. Ancestry and relationship of polyploids. Syst. Bot. 25 (2000) 260-280
7. Chen J.M., Wang J.Y., Liu X., Zhang Y.W., and Wang Q.F. RAPD analysis for genetic diversity of Isoetes sinensis. Biodivers. Sci. 12 (2004) 348-353 (in Chinese with English abstract)
8. Chen Y.Y., Ye Q.G., Li Z.Z., and Huang H.W. Genetic structure of Xiuning population of Isoetes sinensis, a critically endangered species in China. Biodivers. Sci. 12 (2004) 564-571 (in Chinese with English abstract)
9. Chen J.M., and Wang Q.F. Genetic diversity in the rare and endangered fern Isoetes orientalis. J. Wuhan Bot. Res. 24 (2006) 569-573 (in Chinese with English abstract)
10. Dolan R.W. Patterns of isozyme variation in relation to population size, isolation, and phytogeographic history in royal catchfly (Silene regia; Caryophyllaceae). Am. J. Bot. 81 (1994) 965-972
11. Ellastrand N.C., and Roose M.L. Patterns of genotypic diversity in clonal plant species. Am. J. Bot. 74 (1987) 123-131
12. Frankham R. Relationship of genetic variation to population size in wildlife. Conserv. Biol. 10 (1996) 1500-1508
13. Frankham R., Ballou J.D., and Briscoe D.A. Introduction to Conservation Genetics (2002), Cambridge University Press, Cambridge
14. Fritsch P., and Rieseberg L.H. The use of random amplified polymorphic DNA (RAPD) in conservation genetics. In: Smith T.B., and Wayne R.K. (Eds). Molecular Genetic Approaches in Conservation (1996), Oxford University Press, New York 54-73
15. Fu L.K., and Jin J.M. China Plant Red Data Book-Rare and Endangered Plants (1992), Science Press, Beijing pp. 538-539
16. Godt M.J.W., Race T., and Hamrick J.L. A population analysis of Ziziphus celata, an endangered Florida shrub. J. Hered. 88 (1997) 531-533
17. Gornall R.J., Hollingsworth P.M., and Preston C.D. Evidence for spatial structure and directional gene flow in a population of an aquatic plant, Potamogeton coloratus. Heredity 80 (1998) 414-421
18. Hardy O.J., and Vekemans X. Patterns of allozyme variation in diploid and tetraploid Centaurea jacea at different spatial scales. Evolution 55 (2001) 943-954
19. Hartl D., and Clark A.G. Principles of Population Genetics. 3rd ed. (1997), Sinauer Associaties, Sunderland
20. He Z.C., Wang H.C., Li J.Q., Ye Q.G., and Taylor W.C. Chromosome behavior during meiosis and development of spore mother cells in the Chinese quillwort Isoetes sinensis T.C. Palmer (Isoetaceae). Am. Fern J. 94 (2005) 183-195
21. Hoot S.B., and Taylor W.C. The utility of nuclear ITS, a LEAFY homolog intron, and chloroplast atpB-rbcL spacer region data in phylogenetic analyses and species delimitation in Isoëtes. Am. Fern J. 91 (2001) 166-177
22. Huang H.W., Dane F., and Norton J.D. Allozyme diversity in Chinese, Seguin and American chestnut (Castanea spp.). Theor. Appl. Genet. 88 (1994) 981-985
23. Hufford K.M., and Mazer S.L. Plant ecotypes: genetic differentiation in the age of ecological restoration. Trends Ecol. Evol. 18 (2003) 147-155
24. Hutchinson D.W., and Templeton A.R. Correlation of pairwise genetic and geographic distance measures: inferring the relative influences of gene flow and drift on the distribution of genetic variability. Evolution 53 (1999) 1898-1914
25. Imbert E., and Lefèvre F. Dispersal and gene flow of Populus nigra along a dynamic river system. J. Ecol. 91 (2003) 447-456
26. Kang M., Jiang M.X., and Huang H.W. Genetic diversity in fragmented populations of Berchemiella wilsonii var. pubipetiolata (Rhamnaceae). Ann. Bot. Lond. 95 (2005) 1145-1151
27. Kang M., Ye Q.G., and Huang H.W. Genetic consequence of restricted habitat and population decline in endangered Isoetes sinensis (Isoetaceae). Ann. Bot. Lond. 96 (2005) 1265-1274
28. Kudoh H., and Whigham D.F. Microgeographic genetic structure and gene flow in Hibiscus moscheutos (Malvaceae) populations. Am. J. Bot. 84 (1997) 1285-1293
29. Lewis P., and Whitkus R. GENESTAT for microcomputers. Am. Soc. Plant Taxon. Newsl. 2 (1989) 15-16
30. Liu H., Wang Q.F., and Taylor W.C. Isoetes orientalis (Isoetaceae), a new hexaplold quillwort from China. Novon 15 (2005) 164-167
31. Liu X., Wang J.Y., and Wang Q.F. Current status and conservation strategies for Isoetes in China: a case study for the conservation of threatened aquatic plants. Oryx 39 (2005) 335-338
32. Liu Y.F., Wang Y., and Huang H.W. High interpopulation genetic differentiation and unidirectional linear migration patterns in Myricaria laxiflora (Tamaricaceae), an endemic riparian plant in the Three Gorges Valley of the Yangtze River. Am. J. Bot. 93 (2006) 206-215
33. López-Pujol J., Bosch M., Simon J., and Blanché C. Allozyme diversity in the tetraploid endemic Thymus loscosii (Lamiaceae). Ann. Bot. Lond. 93 (2004) 323-332
34. Lundqvist E., and Andersson E. Genetic diversity in populations of plants with different breeding and dispersal strategies in a free-flowing boreal river system. Hereditas 135 (2001) 75-83
35. Mantel N.A. The detection of disease clustering and a generalized regression approach. Cancer Res. 27 (1967) 209-220
36. Markwith S.H., and Scanlon M.J. Multiscale analysis of Hymenocallis coronaria (Amaryllidaceae) genetic diversity, genetic structure, and gene movement under the influence of unidirectional stream flow. Am. J. Bot. 94 (2007) 151-160
37. McVean G.A.T. A genealogical interpretation of linkage disequilibrium. Genetics 162 (2002) 987-991
38. Milgroom M.G. Recombination and the multilocus structure of fungal populations. Annu. Rev. Phytopathol. 34 (1996) 457-477
39. Mulcahy D.L., Robinson R.W., Ihara M., and Kesseil R. Gametophytic transcription for acid phosphatase in pollen of Cucurbita species hybrids. J. Hered. 72 (1981) 353-354
40. Ohta T. Linkage disequilibrium with the island model. Genetics 101 (1982) 139-155
41. Orive M.E. Effective population size in organisms with complex life-histories. Theor. Popul. Biol. 44 (1993) 316-340
42. Pang X.A., Liu X., Liu H., Wu C., Wang J.Y., Yang S.X., and Wang Q.F. The geographic distribution and habitat of the Isoetes plants in China. Biodivers. Sci. 11 (2003) 288-294 (in Chinese with English abstract)
43. Pielou E.C. An Introduction to Mathematical Ecology (1969), Wiley Interscience, New York
44. Prober S.M., Spindler L.H., and Brown A.H.D. Conservation of the grassy white box woodlands: effects of remnant population size on genetic diversity in the allotetraploid herb Microseris lanceolata. Conserv. Biol. 12 (1998) 1279-1290
45. Retallack G.J. Earliest Triassic origin of Isoetes and quillwort evolutionary radiation. J. Paleontol. 71 (1997) 500-521
46. Rohlf, F.J., 1994. NTSYS-pc. Version 2.0, Applied Biostatistics Inc., New York.
47. Roose M.L., and Gottlieb L.D. Genetic consequences of polyploidy in Tragopogon. Evolution 30 (1976) 818-830
48. Ritland K. Genetic differentiation, diversity, and inbreeding in the mountain monkey-flower (Mimulus caespitosus) of the WashingtonCascades. Can. J. Bot. 67 (1989) 2017-2024
49. Russell J.R., Weber J.C., Booth A., Powell W., Sotelo-Montes C., and Dawson I.K. Genetic variation of Calycophyllum spruceanum in the Peruvian Amazon Basin, revealed by amplified fragment length polymorphism (AFLP) analysis. Mol. Ecol. 8 (1999) 199-204
50. Schaal B.A., and Leverich W.J. Conservation genetics: theory and practice. Ann. Mol. Bot. Gard. 92 (2005) 1-11
51. Shukla P.K., Srivastava G.K., and Shukla S.K. The quillworts (Isoetes) of India: distribution, endemism and species radiation. Biodivers. Conserv. 11 (2002) 959-973
52. Slatkin M., and Maddison W.P. Detecting isolation by distance using phylogenies of genes. Genetics 126 (1990) 249-260
53. Slatkin M. Isolation by distance in equilibrium and nonequilibrium populations. Evolution 47 (1993) 264-279
54. Smith S., Hughes J., and Wardell-Johnson G. High population differentiation and extensive clonality in a rare mallee eucalypt: Eucalyptus curtisii-conservation genetics of a rare mallee eucalypt. Conserv. Genet. 4 (2003) 289-300
55. Soltis D.E., and Rieseberg L.H. Autopolyploidy in Tolmiea menziesii (Saxifragaceae): genetic insights from enzyme electrophoresis. Am. J. Bot. 73 (1986) 310-318
56. Soltis D.E., and Soltis P.S. Genetic consequences of autopolyploidy in Tolmiea (Saxifragaceae). Evolution 43 (1989) 586-594
57. Soltis P.S., and Soltis D.E. The role of genetic and genomic attributes in the success of polyploids. P. Natl. Acad. Sci. U.S.A. 97 (2000) 7051-7057
58. SPSS, 1999. Statistical Software Package, Version 10.0. SPSS Inc., Chicago.
59. Swofford D.F., and Selander R.B. Biosys-1 (Release 1) Users Manual (1981), University of Illinois, Urban-Champaign
60. Takamiya M., Watanabe M., and Ono K. Biosystematic studies on the genus Isoetes (Isoetaceae) in Japan. I. Variation of somatic chromosome numbers. J. Plant Res. 107 (1994) 289-297
61. Taylor W.C., Lekschas A.R., Wang Q.F., Liu X., Napier N.S., and Hoot S.B. Phylogenetic relationships of Isoetes (Isoetaceae) in China as revealed by nucleotide sequences of the nuclear ribosomal ITS region and the second intron of a LEAFY homolog. Am. Fern J. 94 (2004) 196-205
62. Tero N., Aspi J., Siikamäki P., Jäkäläniemi A., and Tuomi J. Genetic structure and gene flow in a metapopulation of an endangered plant species, Silene tatarica. Mol. Ecol. 12 (2003) 2073-2085
63. Thompson J.D., and Lumaret R. The evolutionary dynamics of polyploid plants: origins, establishment and persistence. Trends Ecol. Evol. 7 (1992) 302-307
64. Van Rossum F., Vekemans X., Meerts P., Gratia E., and Lefèbvre C. Allozyme variation in relation to ecotypic differentiation and population size in marginal populations of Silene nutans. Heredity 78 (1997) 552-560
65. Wang Q.F., Liu X., Taylor W.C., and He Z.R. Isoetes yunguiensis (Isoetaceae), a new basic diploid quillwort from China. Novon 12 (2002) 587-591
66. Weeden N.F., and Wendel J.F. Visualization and interpretations of plant isozymes. In: Soltis D.S., and Soltis P.S. (Eds). Isozymes in plant biology (1989), Dioscorides Press, Portland 46-72
67. Workman P.L., and Niswander J.D. Population studies on southwestern Indian tribes. II. Local genetic differentiation in the Papago. Am. J. Hum. Genet. 22 (1970) 24-49
68. Wright S. The genetic structure of populations. Ann. Eugen. 15 (1951) 323-354
69. Wright S. Evolution and the Genetics of Populations, Volume 4: Variability within and among Natural Populations (1978), University of Chicago Press, Chicago pp. 79-103
70. Yamane K., and Ohnishi O. Phylogenetic relationships among natural populations of Perennial buckwheat, Fagopyrum cymosum Meisn., revealed by allozyme variations. Genet. Resour. Crop Evol. 48 (2001) 69-77
71. Yan T.F., Zu Y.G., Yan X.F., and Zhou F.J. Genetic structure of endangered Rhodiola sachalinensis. Conserv. Genet. 4 (2003) 213-218
72. Yang W., Ye Q.G., Li Z.Z., and Huang H.W. Genetic Differentiation of quantitative traits and local adaptability of remnant populations of Isoetes sinensis and their implication for conservation and genetic reinforcement. J. Plant Ecol. 32 (2008) 143-151 (in Chinese with English abstract)
73. Ye Q.G., and Li J.Q. Distribution status and causation of the endangerment of Isoetes sinensis Palmer in Zhejiang province. J. Wuhan Bot. Res. 21 (2003) 216-220 (in Chinese with English abstract)