Cleavage sites of the "P3 region" in the nonstructural polyprotein precursor of a dicistrovirus

Archives of Virology

Volumn 153, Issue 10, 2008, Pages 1955-1960

  Nakashima, Nobuhiko ^a   Nakamura, Yuri ^a  

^a NATIONAL INSTITUTE OF AGROBIOLOGICAL SCIENCES   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE HYDROLASE; POLYPROTEIN; RECOMBINANT PROTEIN; VIRUS PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; ESCHERICHIA COLI; GENETICS; METABOLISM; MOLECULAR GENETICS; PHYSIOLOGY; PICORNAVIRUS; SEQUENCE ALIGNMENT;

AMINO ACID SEQUENCE; ESCHERICHIA COLI; MOLECULAR SEQUENCE DATA; PEPTIDE HYDROLASES; PICORNAVIRIDAE; POLYPROTEINS; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; VIRAL PROTEINS;

DICISTROVIRIDAE; ESCHERICHIA COLI; PLAUTIA STALI INTESTINE VIRUS;

EID: 53949109390     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-008-0208-5     Document Type: Article

References (17)

1. ML Donnelly LE Hughes G Luke H Mendoza E ten Dam D Gani MD Ryan 2001 The 'cleavage' activities of foot-and-mouth disease virus 2A site-directed mutants and naturally occurring '2A-like' sequences J Gen Virol 82 1027 1041
2. AE Gorbalenya AP Donchenko VM Blinov EV Koonin 1989 Cysteine proteases of positive strand RNA viruses and chymotrypsin-like serine proteases. A distinct protein superfamily with a common structural fold FEBS Lett 243 103 114
3. LE Hunnicutt WB Hunter RD Cave CA Powell JJ Mozoruk 2006 Genome sequence and molecular characterization of Homalodisca coagulata virus-1, a novel virus discovered in the glassy-winged sharpshooter (Hemiptera: Cicadellidae) Virology 350 67 78
4. E Jan 2006 Divergent IRES elements in invertebrates Virus Res 119 16 28
5. Y Kusov V Gauss-Muller 1999 Improving proteolytic cleavage at the 3A/3B site of the hepatitis A virus polyprotein impairs processing and particle formation, and the impairment can be complemented in trans by 3AB and 3ABC J Virol 73 9867 9878
6. O Le Gall P Christian CM Fauquet AM King NJ Knowles N Nakashima G Stanway AE Gorbalenya 2008 Picornavirales, a proposed order of positive-sense single-stranded RNA viruses with a pseudo-T = 3 virion architecture Arch Virol 153 715 727
7. J Mari BT Poulos DV Lightner JR Bonami 2002 Shrimp Taura syndrome virus: genomic characterization and similarity with members of the genus Cricket paralysis-like viruses J Gen Virol 83 915 926
8. NF Moore A Kearns JS Pullin 1980 Characterization of cricket paralysis virus-induced polypeptides in Drosophila cells J Virol 33 1 9
9. N Nakashima N Shibuya 2006 Multiple coding sequences for the genome-linked virus protein (VPg) in dicistroviruses J Invertebr Pathol 92 100 104
10. Nakashima N, Uchiumi T (2008) Functional analysis of structural motifs in dicistroviruses. Virus Res (in press)
11. RR Rueckert E Wimmer 1984 Systematic nomenclature of picornavirus proteins J Virol 50 957 959
12. Skern T, Hampolz B, Guarne A, Fita I, Bergmann E, Petersen J, James MNG (2002) Structure and function of picornavirus proteinases. In: Semler BL, Wimmer E (eds) Molecular biology of picornaviruses. ASM Press, Washington DC, pp 199-212
13. JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools Nucleic Acids Res 25 4876 4882
14. SR Thompson KD Gulyas P Sarnow 2001 Internal initiation in Saccharomyces cerevisiae mediated by an initiator tRNA/eIF2-independent internal ribosome entry site element Proc Natl Acad Sci USA 98 12972 12977
15. RP van Rij MC Saleh B Berry C Foo A Houk C Antoniewski R Andino 2006 The RNA silencing endonuclease Argonaute 2 mediates specific antiviral immunity in Drosophila melanogaster Genes Dev 20 2985 2995
16. XH Wang R Aliyari WX Li HW Li K Kim R Carthew P Atkinson SW Ding 2006 RNA interference directs innate immunity against viruses in adult Drosophila Science 312 452 454
17. C Williamson EP Rybicki 1989 A comparative study on the cell-free translation of the genomic RNAs of two aphid picorna-like viruses Arch Virol 109 59 70