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Volumn 73, Issue 5, 2008, Pages 1228-1248

Molecular phylogeny of Turkish Trachurus species (Perciformes: Carangidae) inferred from mitochondrial DNA analyses

Author keywords

Control region; Cytochrome b; Genetic variation; Mackerel; Marine fish; mtDNA

Indexed keywords

CARANGIDAE; PERCIFORMES; TRACHURUS; TRACHURUS MEDITERRANEUS; TRACHURUS PICTURATUS; TRACHURUS TRACHURUS;

EID: 53649107752     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2008.01996.x     Document Type: Article
Times cited : (27)

References (47)
  • 1
    • 53649085767 scopus 로고    scopus 로고
    • Natural history, early 21st-century style
    • Avise, J. C 2000). Natural history, early 21st-century style. Intecol Newsletter 2000, 9 10.
    • (2000) Intecol Newsletter , vol.2000 , pp. 9-10
    • Avise, J.C.1
  • 2
    • 0000919224 scopus 로고
    • The effects of the geological and phyco-chemical factors on the distribution of marine plants and animals in the Mediterranean
    • In. Moraitou-Apostolopoulou, M. Kiortsis, V., eds. pp. NATO conference series. I, Ecology, New York, NY: Plenum Press.
    • Bacescu, M 1985). The effects of the geological and phyco-chemical factors on the distribution of marine plants and animals in the Mediterranean. In Mediterranean Marine Ecosystems (Moraitou-Apostolopoulou, M. Kiortsis, V., eds pp. 195 212. NATO conference series. I, Ecology, Vol. 8. New York, NY : Plenum Press.
    • (1985) Mediterranean Marine Ecosystems , vol.8 , pp. 195-212
    • Bacescu, M.1
  • 3
    • 0029537164 scopus 로고
    • Key to the genus Trachurus Rafinesque, 1810 (Teleostei, Carangidae)
    • Ben Salem, M 1995). Key to the genus Trachurus Rafinesque, 1810 (Teleostei, Carangidae). Journal of Ichthyology 35, 40 53.
    • (1995) Journal of Ichthyology , vol.35 , pp. 40-53
    • Ben Salem, M.1
  • 4
    • 0002365848 scopus 로고    scopus 로고
    • Fish biogeography and molecular clocks: Perspectives from the Panamanian Isthmus
    • In. Kocher, T. D. Stepien, C. A., eds. pp. New York, NY: Academic Press.
    • Bermingham, E., McCafferty, S. S. Martin, A. P 1997). Fish biogeography and molecular clocks: perspectives from the Panamanian Isthmus. In Molecular Systematics of Fishes (Kocher, T. D. Stepien, C. A., eds pp. 113 128. New York, NY : Academic Press.
    • (1997) Molecular Systematics of Fishes , pp. 113-128
    • Bermingham, E.1    McCafferty, S.S.2    Martin, A.P.3
  • 5
    • 0001524014 scopus 로고
    • Potential role of the palaeohistory of the Mediterranean and Paratethys basins on the early dispersal of Euro-Mediterranean freshwater fishes
    • Bianco, P. G 1990). Potential role of the palaeohistory of the Mediterranean and Paratethys basins on the early dispersal of Euro-Mediterranean freshwater fishes. Ichthyological Exploration of Freshwaters 1, 167 184.
    • (1990) Ichthyological Exploration of Freshwaters , vol.1 , pp. 167-184
    • Bianco, P.G.1
  • 7
    • 38749126947 scopus 로고    scopus 로고
    • Genetic variation in the mitochondrial DNA control region among horse mackerel (Trachurus trachurus) from the Atlantic and Mediterranean areas
    • Comesańa, A. S., Martínez-Areal, M. T. Sanjuan, A 2008). Genetic variation in the mitochondrial DNA control region among horse mackerel (Trachurus trachurus) from the Atlantic and Mediterranean areas. Fisheries Research 89, 122 131.
    • (2008) Fisheries Research , vol.89 , pp. 122-131
    • Comesańa, A.S.1    Martínez-Areal, M.T.2    Sanjuan, A.3
  • 8
    • 35948984692 scopus 로고
    • Chronology of the Black Sea over the last 25,000 years
    • Degens, E. T. Ross, D. A 1972). Chronology of the Black Sea over the last 25,000 years. Chemical Geology 10, 1 16.
    • (1972) Chemical Geology , vol.10 , pp. 1-16
    • Degens, E.T.1    Ross, D.A.2
  • 9
    • 0011179423 scopus 로고
    • On the eggs and larvae of the Trachurus trachurus (L.) and Trachurus mediterraneus (Stdhnr) from the Sea of Marmara and the Black Sea. Commission Internationale pour L'exploration Scientifique de la Mer Mediterranée (CIESM)
    • Demir, M 1961). On the eggs and larvae of the Trachurus trachurus (L.) and Trachurus mediterraneus (Stdhnr) from the Sea of Marmara and the Black Sea. Commission Internationale pour L'exploration Scientifique de la Mer Mediterranée (CIESM). Monaco 16, 317 320.
    • (1961) Monaco , vol.16 , pp. 317-320
    • Demir, M.1
  • 12
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J 1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783 791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 13
    • 34548497872 scopus 로고    scopus 로고
    • Messinian event in the Black Sea: Evidence of a Messinian erosional surface
    • Gillet, H., Lericolais, G. Réhault, J. P 2007). Messinian event in the Black Sea: evidence of a Messinian erosional surface. Marine Geology 244, 142 165.
    • (2007) Marine Geology , vol.244 , pp. 142-165
    • Gillet, H.1    Lericolais, G.2    Réhault, J.P.3
  • 14
    • 27144493424 scopus 로고    scopus 로고
    • A second look at mitochondrial DNA variability in European anchovy (Engraulis encrasicolus): Assessing models of population structure and the Black Sea isolation hypothesis
    • Grant, W. S 2005). A second look at mitochondrial DNA variability in European anchovy (Engraulis encrasicolus): assessing models of population structure and the Black Sea isolation hypothesis. Genetica 125, 293 309.
    • (2005) Genetica , vol.125 , pp. 293-309
    • Grant, W.S.1
  • 16
    • 0002451815 scopus 로고
    • When the Black Sea was drained
    • Hsü, K. J 1978). When the Black Sea was drained. Scientific American 238, 52 63.
    • (1978) Scientific American , vol.238 , pp. 52-63
    • Hsü, K.J.1
  • 17
    • 0031671557 scopus 로고    scopus 로고
    • Tests for ancient species flocks based on molecular phylogenetic appraisals of Sebastes rockfishes and other marine fishes
    • Johns, G. C. Avise, J. C 1998). Tests for ancient species flocks based on molecular phylogenetic appraisals of Sebastes rockfishes and other marine fishes. Evolution 52, 1135 1146.
    • (1998) Evolution , vol.52 , pp. 1135-1146
    • Johns, G.C.1    Avise, J.C.2
  • 19
    • 9644289247 scopus 로고    scopus 로고
    • Shallow genetic structure of three marine species of the genus Trachurus present in European waters
    • Karaiskou, N., Triantafyllidis, A. Triantaphyllidis, C 2004). Shallow genetic structure of three marine species of the genus Trachurus present in European waters. Marine Ecology Progress Series 281, 193 205.
    • (2004) Marine Ecology Progress Series , vol.281 , pp. 193-205
    • Karaiskou, N.1    Triantafyllidis, A.2    Triantaphyllidis, C.3
  • 20
    • 0001114656 scopus 로고
    • Genetic divergence and relationship among fifteen species of genera Trachurus, Decapterus, Selar, and Selaroides
    • Kijima, A., Taniguchi, N. Ochiai, A 1988). Genetic divergence and relationship among fifteen species of genera Trachurus, Decapterus, Selar, and Selaroides. Japanese Journal of Ichthyology 35, 167 175.
    • (1988) Japanese Journal of Ichthyology , vol.35 , pp. 167-175
    • Kijima, A.1    Taniguchi, N.2    Ochiai, A.3
  • 21
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences
    • Kimura, M 1980). A simple method for estimating evolutionary rate of base substitution through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16, 111 120.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 23
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. Nei, M 2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5, 150 163.
    • (2004) Briefings in Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 24
    • 1642394006 scopus 로고    scopus 로고
    • Phylogeny of the East Asian cyprinids inferred from sequences of the mitochondrial DNA control region
    • Liu, H. Chen, Y 2003). Phylogeny of the East Asian cyprinids inferred from sequences of the mitochondrial DNA control region. Canadian Journal of Zoology 81, 1938 1946.
    • (2003) Canadian Journal of Zoology , vol.81 , pp. 1938-1946
    • Liu, H.1    Chen, Y.2
  • 25
    • 0030071894 scopus 로고    scopus 로고
    • Mitochondrial DNA phylogeny and the reconstruction of the population history of a species: The case of the European anchovy (Engraulis encrasicolus)
    • Magoulas, A., Tsimenides, N. Zouros, E 1996). Mitochondrial DNA phylogeny and the reconstruction of the population history of a species: the case of the European anchovy (Engraulis encrasicolus). Molecular Biology Evolution 13, 178 190.
    • (1996) Molecular Biology Evolution , vol.13 , pp. 178-190
    • Magoulas, A.1    Tsimenides, N.2    Zouros, E.3
  • 26
    • 0001792962 scopus 로고
    • Evolution of mitochondrial DNA in fishes
    • In: pp. Amsterdam: Elsevier.
    • Meyer, A 1993). Evolution of mitochondrial DNA in fishes. In : Biochemistry and Molecular Biology of Fishes, Vol. 2, pp. 1 38. Amsterdam : Elsevier.
    • (1993) Biochemistry and Molecular Biology of Fishes , vol.2 , pp. 1-38
    • Meyer, A.1
  • 28
    • 1642546917 scopus 로고    scopus 로고
    • Phylogenetic structure of Zacco platypus (Teleostei, Cyprinidae) populations on the upper and middle Changjiang (= Yangtze) drainage inferred from cytochrome b sequences
    • Perdices, A., Cunha, C. Coelho, M. M 2004). Phylogenetic structure of Zacco platypus (Teleostei, Cyprinidae) populations on the upper and middle Changjiang (= Yangtze) drainage inferred from cytochrome b sequences. Molecular Phylogenetics and Evolution 31, 192 203.
    • (2004) Molecular Phylogenetics and Evolution , vol.31 , pp. 192-203
    • Perdices, A.1    Cunha, C.2    Coelho, M.M.3
  • 29
    • 2442434728 scopus 로고    scopus 로고
    • Phylogenetic relationships of glyptosternoid fishes (Siluriformes: Sisoridae) inferred from mitochondrial cytochrome b gene sequences
    • Peng, Z., He, S. Zhang, Y 2004). Phylogenetic relationships of glyptosternoid fishes (Siluriformes: Sisoridae) inferred from mitochondrial cytochrome b gene sequences. Molecular Phylogenetics and Evolution 31, 979 987.
    • (2004) Molecular Phylogenetics and Evolution , vol.31 , pp. 979-987
    • Peng, Z.1    He, S.2    Zhang, Y.3
  • 31
    • 34447531519 scopus 로고    scopus 로고
    • Environmental management of fish resources in the Black sea and their rational exploitation. General fisheries council for the Mediterranean
    • Prodanov, K., Mikhailov, K., Dasklov, G., Maxim, C., Chashchin, A., Arkhipov, A., Shlyakhov, V. Ozdamar, E 1997). Environmental management of fish resources in the Black sea and their rational exploitation. General fisheries council for the Mediterranean. FAO Studies and Reviews 60, 100 110.
    • (1997) FAO Studies and Reviews , vol.60 , pp. 100-110
    • Prodanov, K.1    Mikhailov, K.2    Dasklov, G.3    Maxim, C.4    Chashchin, A.5    Arkhipov, A.6    Shlyakhov, V.7    Ozdamar, E.8
  • 32
    • 0029178096 scopus 로고
    • An exact test for population differentiation
    • Raymond, M. Rousset, F 1995). An exact test for population differentiation. Evolution 49, 1280 1283.
    • (1995) Evolution , vol.49 , pp. 1280-1283
    • Raymond, M.1    Rousset, F.2
  • 34
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3.15: An integrated program for molecular population genetics and molecular evolution analysis
    • Rozas, J. Rozas, R 1999). DnaSP version 3.15: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15, 174 175.
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 35
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. Nei, M 1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4, 406 425.
    • (1987) Molecular Biology and Evolution , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 36
    • 0002755962 scopus 로고
    • Ecological factors and their biogeographic consequences in the Mediterranean ecosystems
    • In: Moraitou-Apostolopoulou, M. Kiortsis, V., eds. pp. New York, NY: Plenum Press.
    • Sara, M. (1985). Ecological factors and their biogeographic consequences in the Mediterranean ecosystems. In : Mediterranean Marine Ecosystems (Moraitou-Apostolopoulou, M. Kiortsis, V., eds pp. 1 17. New York, NY : Plenum Press.
    • (1985) Mediterranean Marine Ecosystems , pp. 1-17
    • Sara, M.1
  • 37
    • 0031593240 scopus 로고    scopus 로고
    • Mammalian mitochondrial D-loop region structural analysis: Identification of new conserved sequences and their functional and evolutionary implications
    • Sbisà, E., Tanzariello, F., Reyes, A. Pesole, G 1997). Mammalian mitochondrial D-loop region structural analysis: identification of new conserved sequences and their functional and evolutionary implications. Gene 205, 125 140.
    • (1997) Gene , vol.205 , pp. 125-140
    • Sbisà, E.1    Tanzariello, F.2    Reyes, A.3    Pesole, G.4
  • 39
    • 0344901022 scopus 로고
    • Systematics, morpho-ecological characteristics and origin of Carangids of the genus Trachurus
    • Shaboneyev, I. Y 1981). Systematics, morpho-ecological characteristics and origin of Carangids of the genus Trachurus. Journal of Ichthyology 20, 15 24.
    • (1981) Journal of Ichthyology , vol.20 , pp. 15-24
    • Shaboneyev, I.Y.1
  • 40
    • 0000214773 scopus 로고
    • Carangidae
    • In. Whitehead, P. J. P. Bauchot, M. Hureau, J. C., Nielsen, J. Tortonese, E., eds. pp. Paris, France: UNESCO.
    • Smith-Vaniz, W. F 1986). Carangidae. In Fishes of the North-eastern Atlantic and the Mediterranean, Vol. 2 (Whitehead, P. J. P. Bauchot, M.-L., Hureau, J. C., Nielsen, J. Tortonese, E., eds pp. 815 844. Paris, France : UNESCO.
    • (1986) Fishes of the North-eastern Atlantic and the Mediterranean , vol.2-50 , pp. 815-844
    • Smith-Vaniz, W.F.1
  • 41
    • 4143080616 scopus 로고    scopus 로고
    • Phylogeographic relationships within the Mediterranean turbot inferred by mitochondrial DNA haplotype variation
    • Suzuki, N., Nishida, M., Yoseda, K., Üstündaǧ, C., Şahin, T. Amaoka, K 2004). Phylogeographic relationships within the Mediterranean turbot inferred by mitochondrial DNA haplotype variation. Journal of Fish Biology 65, 1 6.
    • (2004) Journal of Fish Biology , vol.65 , pp. 1-6
    • Suzuki, N.1    Nishida, M.2    Yoseda, K.3    Üstündaǧ, C.4    Şahin, T.5    Amaoka, K.6
  • 42
    • 0031574072 scopus 로고    scopus 로고
    • The Clustal X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. Higgins, D. G 1997). The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24, 4876 4882.
    • (1997) Nucleic Acids Research , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 43
    • 0002441963 scopus 로고
    • Distribution and ecology of endemic elements in the Mediterranean fauna (fishes and echinoderms)
    • In. Moraitou-Apostolopoulou, M. Kiortsis, V., eds), pp. New York: Plenum Press.
    • Tortonese, E. (1985). Distribution and ecology of endemic elements in the Mediterranean fauna (fishes and echinoderms). In Mediterranean Marine Ecosystems (Moraitou-Apostolopoulou, M. Kiortsis, V., eds), pp. 57 83. New York : Plenum Press.
    • (1985) Mediterranean Marine Ecosystems , pp. 57-83
    • Tortonese, E.1
  • 44
    • 0002188733 scopus 로고
    • Whitehead, P. J. P., Bauchot, M. L., Hureau, J. C., Nielsen, J. Tortonese, E. Eds. II, pp. Paris: UNESCO.
    • Whitehead, P. J. P., Bauchot, M. L., Hureau, J. C., Nielsen, J. Tortonese, E Eds 1986). Fishes of the North-eastern Atlantic and the Mediterranean, II, pp. 517 1007. Paris : UNESCO.
    • (1986) Fishes of the North-eastern Atlantic and the Mediterranean , pp. 517-1007
  • 45
    • 53649106227 scopus 로고    scopus 로고
    • Morphological properties of Horse mackerel, Trachurus mediterraneus ponticus Aleev, 1956 (Osteichthyes: Carangidae) from the Black Sea
    • Yankova, M. H. Raykov, V. S 2006). Morphological properties of Horse mackerel, Trachurus mediterraneus ponticus Aleev, 1956 (Osteichthyes: Carangidae) from the Black Sea. Turkish Journal of Fisheries and Aquatic Sciences 6, 85 91.
    • (2006) Turkish Journal of Fisheries and Aquatic Sciences , vol.6 , pp. 85-91
    • Yankova, M.H.1    Raykov, V.S.2
  • 46
    • 53649110275 scopus 로고    scopus 로고
    • Updated database version of March 2003. Catalog databases as made available to FishBase in March 2003. World Wide Web electronic publication. Available at
    • Eschmeyer, W. N. (2003). Catalog of Fishes. Updated database version of March 2003. Catalog databases as made available to FishBase in March 2003. World Wide Web electronic publication. Available at http://www.fishbase.org/
    • (2003) Catalog of Fishes.
    • Eschmeyer, W.N.1
  • 47
    • 53649098771 scopus 로고    scopus 로고
    • Froese, R. Pauly, D. Eds. Available at
    • Froese, R. Pauly, D Eds 2001). Fishbase. Available at http://www.fishbase.org./
    • (2001) Fishbase.


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