메뉴 건너뛰기




Volumn 31, Issue 5, 2008, Pages 352-357

Saccharopolyspora endophytica sp. nov., an endophytic actinomycete isolated from the root of Maytenus austroyunnanensis

Author keywords

16S rRNA gene; Endophytic actinomycete; Saccharopolyspora endophytica sp. nov.

Indexed keywords

DNA; FATTY ACID; QUINONE DERIVATIVE; RIBOSOME RNA;

EID: 53149141753     PISSN: 07232020     EISSN: 16180984     Source Type: Journal    
DOI: 10.1016/j.syapm.2008.08.001     Document Type: Article
Times cited : (34)

References (37)
  • 1
    • 0019306204 scopus 로고
    • Lipids in the classification and identification of coryneform bacteria containing peptidoglycan based on 2, 4-diaminobutyric acid
    • Collins M.D., and Jones D. Lipids in the classification and identification of coryneform bacteria containing peptidoglycan based on 2, 4-diaminobutyric acid. J. Appl. Bacteriol. 48 (1980) 459-470
    • (1980) J. Appl. Bacteriol. , vol.48 , pp. 459-470
    • Collins, M.D.1    Jones, D.2
  • 3
    • 0027329329 scopus 로고
    • Isolation and characterization of actinomycete antagonists of a fungal root pathogen
    • Crawford D.L., Lynch J.M., Whipps J.M., and Ousley M.A. Isolation and characterization of actinomycete antagonists of a fungal root pathogen. Appl. Environ. Microbiol. 59 (1993) 3899-3905
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 3899-3905
    • Crawford, D.L.1    Lynch, J.M.2    Whipps, J.M.3    Ousley, M.A.4
  • 4
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki T., Hashimoto Y., and Yabuuchi E. Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int. J. Syst. Bacteriol. 39 (1989) 224-229
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 5
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39 (1985) 783-789
    • (1985) Evolution , vol.39 , pp. 783-789
    • Felsenstein, J.1
  • 6
    • 0005482101 scopus 로고
    • Saccharopolyspora gregorii and Saccharopolyspora hordei: two new actinomycete species from fodder
    • Goodfellow M., Lacey J., Athalye M., Embley T.M., and Bowen T. Saccharopolyspora gregorii and Saccharopolyspora hordei: two new actinomycete species from fodder. J. Gen. Microbiol. 135 (1989) 2125-2139
    • (1989) J. Gen. Microbiol. , vol.135 , pp. 2125-2139
    • Goodfellow, M.1    Lacey, J.2    Athalye, M.3    Embley, T.M.4    Bowen, T.5
  • 8
    • 0030870230 scopus 로고    scopus 로고
    • Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil
    • Groth I., Schumann P., Rainey F.A., Martin K., Schuetze B., and Augsten K. Demetria terragena gen. nov., sp. nov., a new genus of actinomycetes isolated from compost soil. Int. J. Syst. Bacteriol. 47 (1997) 1129-1133
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 1129-1133
    • Groth, I.1    Schumann, P.2    Rainey, F.A.3    Martin, K.4    Schuetze, B.5    Augsten, K.6
  • 9
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa T., Takizawa M., and Tanida S. A rapid analysis for chemical grouping of aerobic actinomycetes. J. Gen. Microbiol. 29 (1983) 319-322
    • (1983) J. Gen. Microbiol. , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 11
    • 0029799185 scopus 로고    scopus 로고
    • Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa
    • Kämpfer P., and Kroppenstedt R.M. Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can. J. Microbiol. 42 (1996) 989-1005
    • (1996) Can. J. Microbiol. , vol.42 , pp. 989-1005
    • Kämpfer, P.1    Kroppenstedt, R.M.2
  • 13
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequence
    • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequence. J. Mol. Evol. 16 (1980) 111-120
    • (1980) J. Mol. Evol. , vol.16 , pp. 111-120
    • Kimura, M.1
  • 14
    • 84963036271 scopus 로고
    • Quantitative phyletics and the evolution of anurans
    • Kluge A.G., and Farris F.S. Quantitative phyletics and the evolution of anurans. Syst. Zool. 18 (1969) 1-32
    • (1969) Syst. Zool. , vol.18 , pp. 1-32
    • Kluge, A.G.1    Farris, F.S.2
  • 15
    • 0024448961 scopus 로고
    • Transfer of Faenia rectivirgula Kurup and Agre 1983 to the genus Saccharopolyspora Lacey and Goodfellow 1975, elevation of Saccharopolyspora hirsuta subsp. taberi Labeda 1987 to species level, and emended description of the genus Saccharopolyspora
    • Korn-Wendisch F., Kempf A., Grund E., Kroppenstedt T., and Kutzner H.J. Transfer of Faenia rectivirgula Kurup and Agre 1983 to the genus Saccharopolyspora Lacey and Goodfellow 1975, elevation of Saccharopolyspora hirsuta subsp. taberi Labeda 1987 to species level, and emended description of the genus Saccharopolyspora. Int. J. Syst. Bacteriol. 39 (1989) 430-441
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 430-441
    • Korn-Wendisch, F.1    Kempf, A.2    Grund, E.3    Kroppenstedt, T.4    Kutzner, H.J.5
  • 16
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar S., Tamura K., and Nei M. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinf. 5 (2004) 150-163
    • (2004) Brief Bioinf. , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 17
    • 0023132796 scopus 로고
    • Transfer of the type strain of Streptomyces erthyraeus (Waksman 1923) Waksman and Henrici 1948 to the genus Saccharopolyspora Lacey and Goodfellow 1975 as Saccharopolyspora erythraea sp. nov., and designation of a neotype strain for Streptomyces erythraeus
    • Labeda D.P. Transfer of the type strain of Streptomyces erthyraeus (Waksman 1923) Waksman and Henrici 1948 to the genus Saccharopolyspora Lacey and Goodfellow 1975 as Saccharopolyspora erythraea sp. nov., and designation of a neotype strain for Streptomyces erythraeus. Int. J. Syst. Bacteriol. 37 (1987) 19-22
    • (1987) Int. J. Syst. Bacteriol. , vol.37 , pp. 19-22
    • Labeda, D.P.1
  • 18
    • 0016741538 scopus 로고
    • A novel actinomycete from sugarcane bagasse: Saccharopolyspora hirsuta gen. et sp. nov
    • Lacey J., and Goodfellow M. A novel actinomycete from sugarcane bagasse: Saccharopolyspora hirsuta gen. et sp. nov. J. Gen. Microbiol. 88 (1975) 75-85
    • (1975) J. Gen. Microbiol. , vol.88 , pp. 75-85
    • Lacey, J.1    Goodfellow, M.2
  • 19
    • 0002044672 scopus 로고
    • Chemical composition as a criterion in the classification of aerobic actinomycetes
    • Lechevalier H.A., and Lechevalier M.P. Chemical composition as a criterion in the classification of aerobic actinomycetes. Int. J. Syst. Bacteriol. 20 (1970) 435-443
    • (1970) Int. J. Syst. Bacteriol. , vol.20 , pp. 435-443
    • Lechevalier, H.A.1    Lechevalier, M.P.2
  • 21
    • 34547447107 scopus 로고    scopus 로고
    • Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China) and emended description of the genus Georgenia
    • Li W.J., Xu P., Schumann P., Zhang Y.Q., Pukall R., Xu L.H., Stackebrandt E., and Jiang C.L. Georgenia ruanii sp. nov., a novel actinobacterium isolated from forest soil in Yunnan (China) and emended description of the genus Georgenia. Int. J. Syst. Evol. Microbiol. 57 (2007) 1424-1428
    • (2007) Int. J. Syst. Evol. Microbiol. , vol.57 , pp. 1424-1428
    • Li, W.J.1    Xu, P.2    Schumann, P.3    Zhang, Y.Q.4    Pukall, R.5    Xu, L.H.6    Stackebrandt, E.7    Jiang, C.L.8
  • 22
    • 0035065812 scopus 로고    scopus 로고
    • Saccharopolyspora flava sp. nov. and Saccharopolyspora thermophila sp. nov., novel actinomycetes from soil
    • Lu Z., Liu Z., Wang L., Qi W., and Goodfellow M. Saccharopolyspora flava sp. nov. and Saccharopolyspora thermophila sp. nov., novel actinomycetes from soil. Int. J. Syst. Evol. Microbiol. 51 (2001) 319-325
    • (2001) Int. J. Syst. Evol. Microbiol. , vol.51 , pp. 319-325
    • Lu, Z.1    Liu, Z.2    Wang, L.3    Qi, W.4    Goodfellow, M.5
  • 23
    • 0025141498 scopus 로고
    • Saccharopolyspora spinosa sp. nov. isolated from soil collected in a sugar mill rum still
    • Mertz F.P., and Yao R.C. Saccharopolyspora spinosa sp. nov. isolated from soil collected in a sugar mill rum still,. Int. J. Syst. Bacteriol. 40 (1990) 34-39
    • (1990) Int. J. Syst. Bacteriol. , vol.40 , pp. 34-39
    • Mertz, F.P.1    Yao, R.C.2
  • 24
    • 0000198211 scopus 로고
    • Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah M., Premachandran U., and Whitman W.B. Precise measurement of the G+C content of deoxyribonucleic acid by high-performance liquid chromatography. Int. J. Syst. Bacteriol. 39 (1989) 159-167
    • (1989) Int. J. Syst. Bacteriol. , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 25
    • 0018393563 scopus 로고
    • Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa
    • Minnikin D.E., Collins M.D., and Goodfellow M. Fatty acid and polar lipid composition in the classification of Cellulomonas, Oerskovia and related taxa. J. Appl. Bacteriol. 47 (1979) 87-95
    • (1979) J. Appl. Bacteriol. , vol.47 , pp. 87-95
    • Minnikin, D.E.1    Collins, M.D.2    Goodfellow, M.3
  • 26
    • 44449144647 scopus 로고    scopus 로고
    • Saccharopolyspora cebuensis sp. nov., a novel actinomycete isolated from a Philippine sponge (Porifera)
    • Pimentel-Elardo S.M., Tiro L.P., Grozdanov L., and Hentschel U. Saccharopolyspora cebuensis sp. nov., a novel actinomycete isolated from a Philippine sponge (Porifera). Int. J. Syst. Evol. Microbiol. 58 (2008) 628-632
    • (2008) Int. J. Syst. Evol. Microbiol. , vol.58 , pp. 628-632
    • Pimentel-Elardo, S.M.1    Tiro, L.P.2    Grozdanov, L.3    Hentschel, U.4
  • 28
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N., and Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4 (1987) 406-425
    • (1987) Mol. Biol. Evol. , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 29
    • 0141810217 scopus 로고
    • Identification of bacteria by gas chromatography of cellular fatty acids
    • Sasser M. Identification of bacteria by gas chromatography of cellular fatty acids. USFCC Newsl. 20 (1990) 16
    • (1990) USFCC Newsl. , vol.20 , pp. 16
    • Sasser, M.1
  • 30
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling E.B., and Gottlieb D. Methods for characterization of Streptomyces species. Int. J. Syst. Bacteriol. 16 (1966) 313-340
    • (1966) Int. J. Syst. Bacteriol. , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 31
    • 0030893495 scopus 로고    scopus 로고
    • Proposal for a new hierarchic classification system, Actinobacteria classis nov
    • Stackebrandt E., Rainey F.A., and Ward-Rainey N.L. Proposal for a new hierarchic classification system, Actinobacteria classis nov. Int. J. Syst. Bacteriol. 47 (1997) 479-491
    • (1997) Int. J. Syst. Bacteriol. , vol.47 , pp. 479-491
    • Stackebrandt, E.1    Rainey, F.A.2    Ward-Rainey, N.L.3
  • 33
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25 (1997) 4876-4882
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 36


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.