메뉴 건너뛰기




Volumn 56, Issue 4, 2008, Pages 255-268

Morphology of four plagiogrammacean diatoms; Dimeregramma minor var. nana, Neofragilaria nicobarica, Plagiogramma atomus and Psammogramma vigoensis gen. et sp. nov., and their phylogenetic relationship inferred from partial large subunit rDNA

Author keywords

Araphid pennate diatom; Dimeregramma minor var. nana; Evolution; Morphology; Neofragilaria nicobarica; Partial large subunit rDNA phylogeny; Plagiogramma atomus; Plagiogrammaceae; Psammogramma vigoensis; Talaroneis posidoniae

Indexed keywords

DIATOM; DNA; EVOLUTIONARY BIOLOGY; MORPHOLOGY; PHYLOGENETICS; PHYLOGENY; TAXONOMY;

EID: 53049092838     PISSN: 13220829     EISSN: 14401835     Source Type: Journal    
DOI: 10.1111/j.1440-1835.2008.00507.x     Document Type: Article
Times cited : (17)

References (40)
  • 2
    • 3142546696 scopus 로고
    • Taxonomy and stratigraphic occurrence of the marine diatom genus Rhaphoneis
    • Andrews, G. W. 1975. Taxonomy and stratigraphic occurrence of the marine diatom genus Rhaphoneis. Nova Hedwigia Beih. 53 : 193 227.
    • (1975) Nova Hedwigia Beih. , vol.53 , pp. 193-227
    • Andrews, G.W.1
  • 3
    • 0001363230 scopus 로고
    • Proposals for a standardization of diatom terminology and diagnoses
    • Anonymous.
    • Anonymous. 1975. Proposals for a standardization of diatom terminology and diagnoses. Nova Hedwigia Beih. 53 : 323 54.
    • (1975) Nova Hedwigia Beih. , vol.53 , pp. 323-354
  • 4
    • 27544490635 scopus 로고    scopus 로고
    • Ribosomal DNA sequence variation among sympatric strains of the Cyclotella meneghiniana complex (Bacillariophyceae) reveals cryptic diversity
    • Beszteri, B., Ács, É. Medlin, L. K. 2005. Ribosomal DNA sequence variation among sympatric strains of the Cyclotella meneghiniana complex (Bacillariophyceae) reveals cryptic diversity. Protist 156 : 317 33.
    • (2005) Protist , vol.156 , pp. 317-333
    • Beszteri, B.1    Ács, É.2    Medlin, L.K.3
  • 7
    • 0010288867 scopus 로고
    • Filament formation in the diatom genera Melosira C.A. Agardh and Paralia Heiberg
    • Crawford, R. M. 1979. Filament formation in the diatom genera Melosira C.A. Agardh and Paralia Heiberg. Nova Hedwigia 64 : 121 33.
    • (1979) Nova Hedwigia , vol.64 , pp. 121-133
    • Crawford, R.M.1
  • 8
    • 0345017392 scopus 로고
    • The diatoms Hustedtiella baltica and H. sinuata sp. nov. and the systematic position of the genus
    • Crawford, R. M., Simonsen, R., Hinz, F. Gardner, C. 1993. The diatoms Hustedtiella baltica and H. sinuata sp. nov. and the systematic position of the genus. Nova Hedwigia Beih. 106 : 151 60.
    • (1993) Nova Hedwigia Beih. , vol.106 , pp. 151-160
    • Crawford, R.M.1    Simonsen, R.2    Hinz, F.3    Gardner, C.4
  • 9
    • 0442324706 scopus 로고
    • Sulla Navicula aponina Kuetz. e sui due generi Brachysira Kuetz. e Libellus Cleve
    • De Toni, G. B. 1890. Sulla Navicula aponina Kuetz. e sui due generi Brachysira Kuetz. e Libellus Cleve. Atti Reale Ist. Veneto. Sci. Lett. Arti. 1890 : 967 71.
    • (1890) Atti Reale Ist. Veneto. Sci. Lett. Arti. , vol.1890 , pp. 967-971
    • De Toni, G.B.1
  • 10
    • 0012030498 scopus 로고
    • Diatoms from the Bay of Bengal
    • In. Desikachary, T. V. (Ed.). Madras Science Foundation, Madras, 222. 400A.
    • Desikachary, T. V. Prema, P. 1987. Diatoms from the Bay of Bengal. In Desikachary, T. V. (Ed.). Atlas of Diatoms, Vol. 3. Madras Science Foundation, Madras, pl. 222 400A.
    • (1987) Atlas of Diatoms , vol.3
    • Desikachary, T.V.1    Prema, P.2
  • 11
    • 0011334188 scopus 로고
    • Sinking rates of the marine phytoplankton measured with a fluorochrometer
    • Eppley, R. W., Holmes, R. W. Strickland, J. D. H. 1967. Sinking rates of the marine phytoplankton measured with a fluorochrometer. J. Exp. Mar. Biol. Ecol. 1 : 191 208.
    • (1967) J. Exp. Mar. Biol. Ecol. , vol.1 , pp. 191-208
    • Eppley, R.W.1    Holmes, R.W.2    Strickland, J.D.H.3
  • 12
    • 0002756591 scopus 로고
    • Some littoral diatoms from the coast of Tanzania
    • Foged, N. 1975. Some littoral diatoms from the coast of Tanzania. Biblioth. Phycol. 6 : 1 127.
    • (1975) Biblioth. Phycol. , vol.6 , pp. 1-127
    • Foged, N.1
  • 13
    • 0034200816 scopus 로고    scopus 로고
    • The spectrum of composites: New techniques and materials
    • Fortin, D. Vargas, M. A. 2000. The spectrum of composites: new techniques and materials. J. Am. Dental. Assoc. 131 : 26 30.
    • (2000) J. Am. Dental. Assoc. , vol.131 , pp. 26-30
    • Fortin, D.1    Vargas, M.A.2
  • 14
    • 0012043747 scopus 로고
    • Descriptions of new genera and species of diatoms from the South Pacific
    • Greville, R. 1863. Descriptions of new genera and species of diatoms from the South Pacific. Trans. Bot. Soc. Edinb. 7 : 534 43.
    • (1863) Trans. Bot. Soc. Edinb. , vol.7 , pp. 534-543
    • Greville, R.1
  • 15
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids. Symp. Ser. 41 : 95 8.
    • (1999) Nucl. Acids. Symp. Ser. , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 16
    • 0037456306 scopus 로고    scopus 로고
    • Architecture and material properties of diatom shells provide effective mechanical protection
    • Hamm, C. E., Merkel, R., Springer, O. et al. 2003. Architecture and material properties of diatom shells provide effective mechanical protection. Nature 421 : 841 3.
    • (2003) Nature , vol.421 , pp. 841-843
    • Hamm, C.E.1    Merkel, R.2    Springer, O.3
  • 18
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogeny
    • Huelsenbeck, J. P. Ronquist, F. 2001. MRBAYES: Bayesian inference of phylogeny. Bioinformatics 17 : 754 5.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 19
    • 0001847912 scopus 로고
    • Die Kieselalgenn Deutschlands, Österreichs und der Schweiz
    • In. Rabenhorst, L. (Ed.). Otto Koeltz Science Publishers, Koenigstein, Germany, pp.
    • Hustedt, F. 1959. Die Kieselalgenn Deutschlands, Österreichs und der Schweiz. In Rabenhorst, L. (Ed.). Kryptogamen-Flora Von Deutschland, Osterreich und der Schweiz, Band VII, Teil 2, Otto Koeltz Science Publishers, Koenigstein, Germany, pp. 845.
    • (1959) Kryptogamen-Flora Von Deutschland, Osterreich und der Schweiz, Band VII, Teil 2 , pp. 845
    • Hustedt, F.1
  • 20
    • 0442328801 scopus 로고    scopus 로고
    • Molecular phylogeny and morphology of the marine diatom Talaroneis posidoniae gen. et sp. nov. (Bacillariophyta) advocate the return of the Plagiogrammaceae to the pennate diatoms
    • Kooistra, W. H. C. F., Forlani, G., Sterrenburg, F. A. S. De Stefano, M. 2004. Molecular phylogeny and morphology of the marine diatom Talaroneis posidoniae gen. et sp. nov. (Bacillariophyta) advocate the return of the Plagiogrammaceae to the pennate diatoms. Phycologia 43 : 58 67.
    • (2004) Phycologia , vol.43 , pp. 58-67
    • Kooistra, W.H.C.F.1    Forlani, G.2    Sterrenburg, F.A.S.3    De Stefano, M.4
  • 21
    • 84882505207 scopus 로고    scopus 로고
    • The origin and evolution of the diatoms: Their adaptation to a planktonic existence
    • In: Falkowski, P. G. Knoll, A. H. (Eds). Elsevier, Amsterdam, pp.
    • Kooistra, W. H. C. F., Gersonde, R., Medlin, L. K. Mann, D. G. 2007. The origin and evolution of the diatoms: their adaptation to a planktonic existence. In : Falkowski, P. G. Knoll, A. H. (Eds). Evolution of Primary Producers in the Sea. Elsevier, Amsterdam, pp. 207 49.
    • (2007) Evolution of Primary Producers in the Sea. , pp. 207-249
    • Kooistra, W.H.C.F.1    Gersonde, R.2    Medlin, L.K.3    Mann, D.G.4
  • 22
    • 0037814710 scopus 로고    scopus 로고
    • Polycationic peptides from diatom biosilica that direct silica nanosphere formation
    • Kröger, N., Deutzmann, R. Sumper, M. 1999. Polycationic peptides from diatom biosilica that direct silica nanosphere formation. Science 286 : 1129 32.
    • (1999) Science , vol.286 , pp. 1129-1132
    • Kröger, N.1    Deutzmann, R.2    Sumper, M.3
  • 23
    • 2542421957 scopus 로고    scopus 로고
    • Evolution of the diatoms: V. Morphological and cytological support for the major clades and a taxonomic revision
    • Medlin, L. K. Kaczmarska, I. 2004. Evolution of the diatoms: V. Morphological and cytological support for the major clades and a taxonomic revision. Phycologia 43 : 245 70.
    • (2004) Phycologia , vol.43 , pp. 245-270
    • Medlin, L.K.1    Kaczmarska, I.2
  • 25
    • 0002686495 scopus 로고
    • The bleaching method for gently loosening and cleaning a single diatom frustule
    • Nagumo, T. Kobayasi, H. 1990. The bleaching method for gently loosening and cleaning a single diatom frustule. Diatom 5 : 45 50.
    • (1990) Diatom , vol.5 , pp. 45-50
    • Nagumo, T.1    Kobayasi, H.2
  • 26
    • 0000001890 scopus 로고
    • A survey of the marine diatoms of Puerto Rico. IV. Suborder Araphidineaea: Families Diatomaceae and Protoraphidaceae
    • Navarro, J. N. 1982. A survey of the marine diatoms of Puerto Rico. IV. Suborder Araphidineaea: families Diatomaceae and Protoraphidaceae. Bot. Mar. 25 : 247 63.
    • (1982) Bot. Mar. , vol.25 , pp. 247-263
    • Navarro, J.N.1
  • 27
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada, D. Crandall, K. A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics 14 : 817 18.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 28
    • 0003358509 scopus 로고
    • Diatomophycées
    • In. Sournia, A. (Ed.). Editions de CNRS, Paris, France, pp.
    • Ricard, M. 1987. Diatomophycées. In Sournia, A. (Ed.). Atlas du Phytoplankton Marin, Vol. 2. Editions de CNRS, Paris, France, pp. 1 297.
    • (1987) Atlas du Phytoplankton Marin , vol.2 , pp. 1-297
    • Ricard, M.1
  • 29
    • 0041386108 scopus 로고    scopus 로고
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models
    • Ronquist, F. Huelsenbeck, J. P. 2003. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinforamtics 19 : 1572 4.
    • (2003) Bioinforamtics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 30
    • 0001507011 scopus 로고    scopus 로고
    • Four new genera based on Achnanthes (Achnanthidium) together with a re-definition of Achnanthidium
    • Round, F. E. Bukhtiyarova, L. 1996. Four new genera based on Achnanthes (Achnanthidium) together with a re-definition of Achnanthidium. Diatom Res. 11 : 345 61.
    • (1996) Diatom Res. , vol.11 , pp. 345-361
    • Round, F.E.1    Bukhtiyarova, L.2
  • 31
    • 0003130656 scopus 로고
    • Phylum bacillariophyta
    • In. Margulis, L., Corliss, J. O., Melkonian, M. Chapman, D. J. (Eds). Jones and Bartlett, Boston, MD, pp.
    • Round, F. E. Crawford, R. M. 1990. Phylum bacillariophyta. In Margulis, L., Corliss, J. O., Melkonian, M. Chapman, D. J. (Eds). Handbook of Protoctista. Jones and Bartlett, Boston, MD, pp. 574 96.
    • (1990) Handbook of Protoctista. , pp. 574-596
    • Round, F.E.1    Crawford, R.M.2
  • 33
    • 53049100147 scopus 로고    scopus 로고
    • Phylogenetics and morphometrics reveal pseudocryptic diversity in a new araphid diatom genus Psammoneis (Plagiogrammaceae, Bacillariophyta) gen. nov
    • Sato S., Kooistra W.H.C.F., Watanabe T., Matsumoto S. Medlin L.K. 2008a. Phylogenetics and morphometrics reveal pseudocryptic diversity in a new araphid diatom genus Psammoneis (Plagiogrammaceae, Bacillariophyta) gen. nov. Phycologia 47 : 510 28.
    • (2008) Phycologia , vol.47 , pp. 510-528
    • Sato, S.1    Kooistra, W.H.C.F.2    Watanabe, T.3    Matsumoto, S.4    Medlin, L.K.5
  • 34
    • 47249155310 scopus 로고    scopus 로고
    • Pseudostriatella pacifica gen. et sp. nov. (Bacillariophyta); A new araphid diatom genus and its fine-structure, auxospore and phylogeny
    • Sato, S., Mann, D. G., Matsumoto, S. Medlin, L. K. 2008b. Pseudostriatella pacifica gen. et sp. nov. (Bacillariophyta); a new araphid diatom genus and its fine-structure, auxospore and phylogeny. Phycologia 47 : 371 91.
    • (2008) Phycologia , vol.47 , pp. 371-391
    • Sato, S.1    Mann, D.G.2    Matsumoto, S.3    Medlin, L.K.4
  • 35
    • 0002821474 scopus 로고
    • The diatom system: Ideas on phylogeny
    • Simonsen, R. 1979. The diatom system: ideas on phylogeny. Bacillaria 2 : 9 71.
    • (1979) Bacillaria , vol.2 , pp. 9-71
    • Simonsen, R.1
  • 36
    • 34548847764 scopus 로고    scopus 로고
    • A nuclear-encoded small-subunit ribosomal RNA timescale for diatom evolution
    • Sorhannus, U. 2007. A nuclear-encoded small-subunit ribosomal RNA timescale for diatom evolution. Mar. Micropaleontol. 65 : 1 12.
    • (2007) Mar. Micropaleontol. , vol.65 , pp. 1-12
    • Sorhannus, U.1
  • 38
    • 55849152055 scopus 로고
    • Notes on marine littoral diatoms from Japan-II
    • Takano, H. 1964. Notes on marine littoral diatoms from Japan-II. Bull. Tokai Reg. Fish. Res. Lab. 39 : 13 23.
    • (1964) Bull. Tokai Reg. Fish. Res. Lab. , vol.39 , pp. 13-23
    • Takano, H.1
  • 39
    • 0002255936 scopus 로고
    • An illustrated catalogue of the type specimens in the Greville diatom herbarium
    • Williams, M. D. 1988. An illustrated catalogue of the type specimens in the Greville diatom herbarium. Bull. Br. Mus. (Nat. Hist.) Bot. 18 : 1 148.
    • (1988) Bull. Br. Mus. (Nat. Hist.) Bot. , vol.18 , pp. 1-148
    • Williams, M.D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.