-
2
-
-
0024596295
-
Methyl-directed DNA mismatch correction
-
Modrich P. Methyl-directed DNA mismatch correction. J. Biol. Chem. 264 (1989) 6597-6600
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 6597-6600
-
-
Modrich, P.1
-
3
-
-
0029943449
-
Mismatch repair in replication fidelity, genetic recombination, and cancer biology
-
Modrich P., and Lahue R. Mismatch repair in replication fidelity, genetic recombination, and cancer biology. Annu. Rev. Biochem. 65 (1996) 101-133
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 101-133
-
-
Modrich, P.1
Lahue, R.2
-
4
-
-
0025071856
-
E. coli oriC and the dnaA gene promoter are sequestered from dam methyltransferase following the passage of the chromosomal replication fork
-
Campbell J.L., and Kleckner N. E. coli oriC and the dnaA gene promoter are sequestered from dam methyltransferase following the passage of the chromosomal replication fork. Cell 62 (1990) 967-979
-
(1990)
Cell
, vol.62
, pp. 967-979
-
-
Campbell, J.L.1
Kleckner, N.2
-
5
-
-
0034574441
-
Limiting DNA replication to once and only once
-
Boye E., Lobner-Olesen A., and Skarstad K. Limiting DNA replication to once and only once. EMBO Rep. 1 (2000) 479-483
-
(2000)
EMBO Rep.
, vol.1
, pp. 479-483
-
-
Boye, E.1
Lobner-Olesen, A.2
Skarstad, K.3
-
6
-
-
26444530070
-
Analysis of global gene expression and double-strand-break formation in DNA adenine methyltransferase- and mismatch repair- deficient Escherichia coli
-
Robbins-Manke J.L., Zdraveski Z.Z., Marinus M., and Essigmann J.M. Analysis of global gene expression and double-strand-break formation in DNA adenine methyltransferase- and mismatch repair- deficient Escherichia coli. J. Bacteriol. 187 (2005) 7027-7037
-
(2005)
J. Bacteriol.
, vol.187
, pp. 7027-7037
-
-
Robbins-Manke, J.L.1
Zdraveski, Z.Z.2
Marinus, M.3
Essigmann, J.M.4
-
7
-
-
0024993922
-
Regulation of pap pilin phase variation by a mechanism involving differential dam methylation states
-
Blyn L.B., Braaten B.A., and Low D.A. Regulation of pap pilin phase variation by a mechanism involving differential dam methylation states. EMBO J. 9 (1990) 4045-4054
-
(1990)
EMBO J.
, vol.9
, pp. 4045-4054
-
-
Blyn, L.B.1
Braaten, B.A.2
Low, D.A.3
-
8
-
-
0031837058
-
Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli
-
Tavazoie S., and Church G.M. Quantitative whole-genome analysis of DNA-protein interactions by in vivo methylase protection in E. coli. Nature Biotechnol. 16 (1998) 566-571
-
(1998)
Nature Biotechnol.
, vol.16
, pp. 566-571
-
-
Tavazoie, S.1
Church, G.M.2
-
9
-
-
0036231043
-
Competitive interaction of the OxyR DNA-binding protein and the Dam methylase at the antigen 43 gene regulatory region in Escherichia coli
-
Waldron D.E., Owen P., and Dorman C.J. Competitive interaction of the OxyR DNA-binding protein and the Dam methylase at the antigen 43 gene regulatory region in Escherichia coli. Mol. Microbiol. 44 (2002) 509-520
-
(2002)
Mol. Microbiol.
, vol.44
, pp. 509-520
-
-
Waldron, D.E.1
Owen, P.2
Dorman, C.J.3
-
11
-
-
0242266619
-
The mechanism by which DNA adenine methylase and PapI activate the pap epigenetic switch
-
Hernday A.D., Braaten B.A., and Low D.A. The mechanism by which DNA adenine methylase and PapI activate the pap epigenetic switch. Mol. Cell 12 (2003) 947-957
-
(2003)
Mol. Cell
, vol.12
, pp. 947-957
-
-
Hernday, A.D.1
Braaten, B.A.2
Low, D.A.3
-
12
-
-
0028845957
-
Differential binding of Lrp to two sets of pap DNA binding sites mediated by Pap I regulates Pap phase variation in Escherichia coli
-
Nou X., Braaten B., Kaltenbach L., and Low D.A. Differential binding of Lrp to two sets of pap DNA binding sites mediated by Pap I regulates Pap phase variation in Escherichia coli. EMBO J. 14 (1995) 5785-5797
-
(1995)
EMBO J.
, vol.14
, pp. 5785-5797
-
-
Nou, X.1
Braaten, B.2
Kaltenbach, L.3
Low, D.A.4
-
13
-
-
0031595203
-
Thermoregulation of Escherichia coli pap transcription: H-NS is a temperature-dependent DNA methylation blocking factor
-
White-Ziegler C.A., Angus Hill M.L., Braaten B.A., van der Woude M.W., and Low D.A. Thermoregulation of Escherichia coli pap transcription: H-NS is a temperature-dependent DNA methylation blocking factor. Mol. Microbiol. 28 (1998) 1121-1137
-
(1998)
Mol. Microbiol.
, vol.28
, pp. 1121-1137
-
-
White-Ziegler, C.A.1
Angus Hill, M.L.2
Braaten, B.A.3
van der Woude, M.W.4
Low, D.A.5
-
14
-
-
0035061330
-
The essential role of the promoter-proximal subunit of CAP in pap phase variation: Lrp- and helical phase-dependent activation of papBA transcription by CAP from -215
-
Weyand N.J., Braaten B.A., van der W.M., Tucker J., and Low D.A. The essential role of the promoter-proximal subunit of CAP in pap phase variation: Lrp- and helical phase-dependent activation of papBA transcription by CAP from -215. Mol. Microbiol. 39 (2001) 1504-1522
-
(2001)
Mol. Microbiol.
, vol.39
, pp. 1504-1522
-
-
Weyand, N.J.1
Braaten, B.A.2
van der, W.M.3
Tucker, J.4
Low, D.A.5
-
15
-
-
8844275981
-
Regulation of the pap epigenetic switch by CpxAR: phosphorylated CpxR inhibits transition to the phase ON state by competition with Lrp
-
Hernday A.D., Braaten B.A., Broitman-Maduro G., Engelberts P., and Low D.A. Regulation of the pap epigenetic switch by CpxAR: phosphorylated CpxR inhibits transition to the phase ON state by competition with Lrp. Mol. Cell 16 (2004) 537-547
-
(2004)
Mol. Cell
, vol.16
, pp. 537-547
-
-
Hernday, A.D.1
Braaten, B.A.2
Broitman-Maduro, G.3
Engelberts, P.4
Low, D.A.5
-
16
-
-
0026562126
-
Leucine responsive regulatory protein (Lrp) controls the expression of both the pap and fan pili operons in Escherichia coli
-
Braaten B.A., Platko J.V., van Woude M., de Graaf F.K., Calvo J.M., and Low D.A. Leucine responsive regulatory protein (Lrp) controls the expression of both the pap and fan pili operons in Escherichia coli. Proc. Natl Acad. Sci. USA 89 (1992) 4250-4254
-
(1992)
Proc. Natl Acad. Sci. USA
, vol.89
, pp. 4250-4254
-
-
Braaten, B.A.1
Platko, J.V.2
van Woude, M.3
de Graaf, F.K.4
Calvo, J.M.5
Low, D.A.6
-
17
-
-
33750527566
-
The architectural role of nucleoid-associated proteins in the organization of bacterial chromatin: A molecular perspective
-
Luijsterburg M.S., Noom M.C., Wuite G.J., and Dame R.T. The architectural role of nucleoid-associated proteins in the organization of bacterial chromatin: A molecular perspective. J. Struct. Biol. 156 (2006) 262-272
-
(2006)
J. Struct. Biol.
, vol.156
, pp. 262-272
-
-
Luijsterburg, M.S.1
Noom, M.C.2
Wuite, G.J.3
Dame, R.T.4
-
18
-
-
34248634008
-
The role of high affinity non-specific DNA binding by Lrp in transcriptional regulation and DNA organization
-
Peterson S.N., Dahlquist F.W., and Reich N.O. The role of high affinity non-specific DNA binding by Lrp in transcriptional regulation and DNA organization. J. Mol. Biol. 369 (2007) 1307-1317
-
(2007)
J. Mol. Biol.
, vol.369
, pp. 1307-1317
-
-
Peterson, S.N.1
Dahlquist, F.W.2
Reich, N.O.3
-
19
-
-
28944438533
-
GATC flanking sequences regulate Dam activity: evidence for how Dam specificity may influence pap expression
-
Peterson S.N., and Reich N.O. GATC flanking sequences regulate Dam activity: evidence for how Dam specificity may influence pap expression. J. Mol. Biol. 355 (2006) 459-472
-
(2006)
J. Mol. Biol.
, vol.355
, pp. 459-472
-
-
Peterson, S.N.1
Reich, N.O.2
-
20
-
-
0020531064
-
Sequence and substrate specificity of isolated DNA methylases from Escherichia coli C
-
Urieli-Shoval S., Gruenbaum Y., and Razin A. Sequence and substrate specificity of isolated DNA methylases from Escherichia coli C. J. Bacteriol. 153 (1983) 274-280
-
(1983)
J. Bacteriol.
, vol.153
, pp. 274-280
-
-
Urieli-Shoval, S.1
Gruenbaum, Y.2
Razin, A.3
-
21
-
-
0031766709
-
Formation of DNA methylation patterns: nonmethylated GATC sequences in gut and pap operons
-
van der W.M., Hale W.B., and Low D.A. Formation of DNA methylation patterns: nonmethylated GATC sequences in gut and pap operons. J. Bacteriol. 180 (1998) 5913-5920
-
(1998)
J. Bacteriol.
, vol.180
, pp. 5913-5920
-
-
van der, W.M.1
Hale, W.B.2
Low, D.A.3
-
22
-
-
0039004232
-
Regulation of Pap phase variation. Lrp is sufficient for the establishment of the phase off pap DNA methylation pattern and repression of pap transcription in vitro
-
Weyand N.J., and Low D.A. Regulation of Pap phase variation. Lrp is sufficient for the establishment of the phase off pap DNA methylation pattern and repression of pap transcription in vitro. J. Biol. Chem. 275 (2000) 3192-3200
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 3192-3200
-
-
Weyand, N.J.1
Low, D.A.2
-
23
-
-
0026830902
-
Quantitation of Dam methyltransferase in Escherichia coli
-
Boye E., Marinus M.G., and Lobner-Olesen A. Quantitation of Dam methyltransferase in Escherichia coli. J. Bacteriol. 174 (1992) 1682-1685
-
(1992)
J. Bacteriol.
, vol.174
, pp. 1682-1685
-
-
Boye, E.1
Marinus, M.G.2
Lobner-Olesen, A.3
-
24
-
-
0024363761
-
Phase-variation of pyelonephritis-associated pili in Escherichia coli: evidence for transcriptional regulation
-
Blyn L.B., Braaten B.A., White-Ziegler C.A., Rolfson D.H., and Low D.A. Phase-variation of pyelonephritis-associated pili in Escherichia coli: evidence for transcriptional regulation. EMBO J. 8 (1989) 613-620
-
(1989)
EMBO J.
, vol.8
, pp. 613-620
-
-
Blyn, L.B.1
Braaten, B.A.2
White-Ziegler, C.A.3
Rolfson, D.H.4
Low, D.A.5
-
25
-
-
0017108205
-
Adenine methylation of Okazaki fragments in Escherichia coli
-
Marinus M.G. Adenine methylation of Okazaki fragments in Escherichia coli. J. Bacteriol. 128 (1976) 853-854
-
(1976)
J. Bacteriol.
, vol.128
, pp. 853-854
-
-
Marinus, M.G.1
-
26
-
-
0024594761
-
Preferential site-specific hemimethylation of GATC sites in pBR322 DNA by Dam methyltransferase from Escherichia coli
-
Bergerat A., Kriebardis A., and Guschlbauer W. Preferential site-specific hemimethylation of GATC sites in pBR322 DNA by Dam methyltransferase from Escherichia coli. J. Biol. Chem. 264 (1989) 4064-4070
-
(1989)
J. Biol. Chem.
, vol.264
, pp. 4064-4070
-
-
Bergerat, A.1
Kriebardis, A.2
Guschlbauer, W.3
-
27
-
-
0025031980
-
The double role of methyl donor and allosteric effector of S-adenosyl-methionine for Dam methylase of E. coli
-
Bergerat A., and Guschlbauer W. The double role of methyl donor and allosteric effector of S-adenosyl-methionine for Dam methylase of E. coli. Nucleic Acids Res. 18 (1990) 4369-4375
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 4369-4375
-
-
Bergerat, A.1
Guschlbauer, W.2
-
28
-
-
0035965134
-
Leucine-regulated self-association of leucine-responsive regulatory protein (Lrp) from Escherichia coli J
-
Chen S., Rosner M.H., and Calvo J.M. Leucine-regulated self-association of leucine-responsive regulatory protein (Lrp) from Escherichia coli J. Mol. Biol. 312 (2001) 625-635
-
(2001)
Mol. Biol.
, vol.312
, pp. 625-635
-
-
Chen, S.1
Rosner, M.H.2
Calvo, J.M.3
-
29
-
-
0025730904
-
Characterization of Lrp, and Escherichia coli regulatory protein that mediates a global response to leucine
-
Willins D.A., Ryan C.W., Platko J.V., and Calvo J.M. Characterization of Lrp, and Escherichia coli regulatory protein that mediates a global response to leucine. J. Biol. Chem. 266 (1991) 10768-10774
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 10768-10774
-
-
Willins, D.A.1
Ryan, C.W.2
Platko, J.V.3
Calvo, J.M.4
-
30
-
-
10544251055
-
Effects of nutrition and growth rate on Lrp levels in Escherichia coli
-
Landgraf J.R., Wu J., and Calvo J.M. Effects of nutrition and growth rate on Lrp levels in Escherichia coli. J. Bacteriol. 178 (1996) 6930-6936
-
(1996)
J. Bacteriol.
, vol.178
, pp. 6930-6936
-
-
Landgraf, J.R.1
Wu, J.2
Calvo, J.M.3
-
31
-
-
0029913838
-
The leucine-responsive regulatory protein (Lrp) from Escherichia coli. Stoichiometry and minimal requirements for binding to DNA
-
Cui Y., Midkiff M.A., Wang Q., and Calvo J.M. The leucine-responsive regulatory protein (Lrp) from Escherichia coli. Stoichiometry and minimal requirements for binding to DNA. J. Biol. Chem. 271 (1996) 6611-6617
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 6611-6617
-
-
Cui, Y.1
Midkiff, M.A.2
Wang, Q.3
Calvo, J.M.4
-
32
-
-
0035282970
-
Crystal structure of the Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus
-
Leonard P.M., Smits S.H., Sedelnikova S.E., Brinkman A.B., de Vos W.M., van der O.J., et al. Crystal structure of the Lrp-like transcriptional regulator from the archaeon Pyrococcus furiosus. EMBO J. 20 (2001) 990-997
-
(2001)
EMBO J.
, vol.20
, pp. 990-997
-
-
Leonard, P.M.1
Smits, S.H.2
Sedelnikova, S.E.3
Brinkman, A.B.4
de Vos, W.M.5
van der, O.J.6
-
33
-
-
33846839291
-
Structure of the Escherichia coli leucine-responsive regulatory protein Lrp reveals a novel octameric assembly
-
de los Rios S., and Perona J.J. Structure of the Escherichia coli leucine-responsive regulatory protein Lrp reveals a novel octameric assembly. J. Mol. Biol. 366 (2007) 1589-1602
-
(2007)
J. Mol. Biol.
, vol.366
, pp. 1589-1602
-
-
de los Rios, S.1
Perona, J.J.2
-
34
-
-
0035861995
-
Modulation of Lrp action in Escherichia coli by leucine: effects on non-specific binding of Lrp to DNA
-
Chen S., Hao Z., Bieniek E., and Calvo J.M. Modulation of Lrp action in Escherichia coli by leucine: effects on non-specific binding of Lrp to DNA. J. Mol. Biol. 314 (2001) 1067-1075
-
(2001)
J. Mol. Biol.
, vol.314
, pp. 1067-1075
-
-
Chen, S.1
Hao, Z.2
Bieniek, E.3
Calvo, J.M.4
-
35
-
-
34447283338
-
Regulation of P-fimbrial phase variation frequencies in Escherichia coli CFT073
-
Holden N., Totsika M., Dixon L., Catherwood K., and Gally D.L. Regulation of P-fimbrial phase variation frequencies in Escherichia coli CFT073. Infect. Immun. 75 (2007) 3325-3334
-
(2007)
Infect. Immun.
, vol.75
, pp. 3325-3334
-
-
Holden, N.1
Totsika, M.2
Dixon, L.3
Catherwood, K.4
Gally, D.L.5
-
36
-
-
0028246736
-
Novel growth rate control of dam gene expression in Escherichia coli
-
Rasmussen L.J., Marinus M.G., and Lobner-Olesen A. Novel growth rate control of dam gene expression in Escherichia coli. Mol. Microbiol. 12 (1994) 631-638
-
(1994)
Mol. Microbiol.
, vol.12
, pp. 631-638
-
-
Rasmussen, L.J.1
Marinus, M.G.2
Lobner-Olesen, A.3
-
37
-
-
0027369102
-
Regulation of the gltBDF operon of Escherichia coli: how is a leucine-insensitive operon regulated by the leucine-responsive regulatory protein? J
-
Ernsting B.R., Denninger J.W., Blumenthal R.M., and Matthews R.G. Regulation of the gltBDF operon of Escherichia coli: how is a leucine-insensitive operon regulated by the leucine-responsive regulatory protein? J. Bacteriol. 175 (1993) 7160-7169
-
(1993)
Bacteriol.
, vol.175
, pp. 7160-7169
-
-
Ernsting, B.R.1
Denninger, J.W.2
Blumenthal, R.M.3
Matthews, R.G.4
-
38
-
-
10644244206
-
Functional characterization of Escherichia coli DNA adenine methyltransferase, a novel target for antibiotics
-
Mashhoon N., Carroll M., Pruss C., Eberhard J., Ishikawa S., Estabrook R.A., and Reich N. Functional characterization of Escherichia coli DNA adenine methyltransferase, a novel target for antibiotics. J. Biol. Chem. 279 (2004) 52075-52081
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 52075-52081
-
-
Mashhoon, N.1
Carroll, M.2
Pruss, C.3
Eberhard, J.4
Ishikawa, S.5
Estabrook, R.A.6
Reich, N.7
-
39
-
-
0028089165
-
Methylation patterns in pap regulatory DNA control pyelonephritis-associated pili phase variation in E. coli
-
Braaten B.A., Nou X., Kaltenbach L.S., and Low D.A. Methylation patterns in pap regulatory DNA control pyelonephritis-associated pili phase variation in E. coli. Cell 76 (1994) 577-588
-
(1994)
Cell
, vol.76
, pp. 577-588
-
-
Braaten, B.A.1
Nou, X.2
Kaltenbach, L.S.3
Low, D.A.4
|