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Volumn , Issue , 2008, Pages 191-196

Accelerating Nussinov RNA secondary structure prediction with systolic arrays on FPGAs

Author keywords

[No Author keywords available]

Indexed keywords

APPLICATIONS; BIOINFORMATICS; BOOLEAN FUNCTIONS; FORECASTING; NUCLEIC ACIDS; PARALLEL ALGORITHMS; RNA;

EID: 51649129789     PISSN: 10636862     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/ASAP.2008.4580177     Document Type: Conference Paper
Times cited : (35)

References (16)
  • 1
    • 33744800528 scopus 로고    scopus 로고
    • Structures of regulatory elements in mRNAs
    • R. T. Batey. Structures of regulatory elements in mRNAs. Current Opinion in Structural Biology, 16:299-306, 2006.
    • (2006) Current Opinion in Structural Biology , vol.16 , pp. 299-306
    • Batey, R.T.1
  • 5
    • 0037062951 scopus 로고    scopus 로고
    • RNA interference
    • G. J. Hannon. RNA interference. Nature, 418:244-51, 2002.
    • (2002) Nature , vol.418 , pp. 244-251
    • Hannon, G.J.1
  • 8
    • 0022482205 scopus 로고
    • Partitioning and mapping algorithms into fixed size systolic arrays
    • D. I. Moldovan and J. A. B. Fortes. Partitioning and mapping algorithms into fixed size systolic arrays. IEEE Trans. Comput., 35(1):1-12, 1986.
    • (1986) IEEE Trans. Comput , vol.35 , Issue.1 , pp. 1-12
    • Moldovan, D.I.1    Fortes, J.A.B.2
  • 10
    • 39049155568 scopus 로고    scopus 로고
    • Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum
    • T. Mourier et al. Genome-wide discovery and verification of novel structured RNAs in Plasmodium falciparum. Genome Research, 18:281-92, 2008.
    • (2008) Genome Research , vol.18 , pp. 281-292
    • Mourier, T.1
  • 12
    • 1242265374 scopus 로고    scopus 로고
    • An algorithm for finding conserved secondary structure motifs in unaligned RNA sequences
    • G. Pavesi, G. Mauri, and G. Pesole. An algorithm for finding conserved secondary structure motifs in unaligned RNA sequences. Journal of Computer Science and Technology, 19:2-12, 2004.
    • (2004) Journal of Computer Science and Technology , vol.19 , pp. 2-12
    • Pavesi, G.1    Mauri, G.2    Pesole, G.3
  • 13
    • 0024663338 scopus 로고
    • Synthesizing systolic arrays with control signals from recurrence equations
    • S. V. Rajopadhye. Synthesizing systolic arrays with control signals from recurrence equations. Distributed Computing, 3(2):88-105, 1989.
    • (1989) Distributed Computing , vol.3 , Issue.2 , pp. 88-105
    • Rajopadhye, S.V.1
  • 16
    • 0024806949 scopus 로고
    • Computer prediction of RNA structure
    • M. Zuker. Computer prediction of RNA structure. Methods in Enzymology, 180:262-88, 1989.
    • (1989) Methods in Enzymology , vol.180 , pp. 262-288
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.