-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul S.F., Gish W., Miller W., Myers E.W., and Lipman D.J. Basic local alignment search tool. J. Mol. Biol. 3 (1990) 403-410
-
(1990)
J. Mol. Biol.
, vol.3
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0033954256
-
The protein data bank
-
Berman H.B., et al. The protein data bank. Nucleic Acids Res. 28 (2000) 235-242
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.B.1
-
3
-
-
0034693042
-
Structural and genomic correlates of hyperthermostability
-
Cambillau C., and Claverie J.M. Structural and genomic correlates of hyperthermostability. J. Biol. Chem. 275 (2000) 32383-32386
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 32383-32386
-
-
Cambillau, C.1
Claverie, J.M.2
-
4
-
-
0042121237
-
Multiple sequence alignment with the Clustal series programs
-
Chenna R., et al. Multiple sequence alignment with the Clustal series programs. Nucleic Acids Res. 31 (2003) 3497-3500
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3497-3500
-
-
Chenna, R.1
-
5
-
-
0023277545
-
Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction
-
Chomczynski P., and Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162 (1987) 156-159
-
(1987)
Anal. Biochem.
, vol.162
, pp. 156-159
-
-
Chomczynski, P.1
Sacchi, N.2
-
7
-
-
51249111392
-
-
DeLano, W.L., 2002. The PyMOL Molecular Graphics System. DeLano Scientific. Palo Alto, CA, USA. http://www.pymol.org.
-
DeLano, W.L., 2002. The PyMOL Molecular Graphics System. DeLano Scientific. Palo Alto, CA, USA. http://www.pymol.org.
-
-
-
-
8
-
-
0031280519
-
Microtubule assembly in cold-adapted organisms: functional properties and structural adaptations of tubulins from Antarctic fishes
-
Detrich III H.W. Microtubule assembly in cold-adapted organisms: functional properties and structural adaptations of tubulins from Antarctic fishes. Comp. Biochem. Physiol. 118 (1997) 501-513
-
(1997)
Comp. Biochem. Physiol.
, vol.118
, pp. 501-513
-
-
Detrich III, H.W.1
-
9
-
-
0024805431
-
Polymerization of Antarctic fish tubulins at low temperatures: energetic aspects
-
Detrich III H.W., Johnson K.A., and Marchese-Ragona S.P. Polymerization of Antarctic fish tubulins at low temperatures: energetic aspects. Biochemistry 28 (1989) 10085-10093
-
(1989)
Biochemistry
, vol.28
, pp. 10085-10093
-
-
Detrich III, H.W.1
Johnson, K.A.2
Marchese-Ragona, S.P.3
-
10
-
-
0034711208
-
Cold adaptation of microtubule assembly and dynamics. Structural interpretation of primary sequence changes present in the alpha- and beta- tubulins of Antarctic fishes
-
Detrich III H.W., Parker S.K., Williams Jr. R.C., Nogales E., and Downing K.H. Cold adaptation of microtubule assembly and dynamics. Structural interpretation of primary sequence changes present in the alpha- and beta- tubulins of Antarctic fishes. J. Biol. Chem. 275 (2000) 37038-37047
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 37038-37047
-
-
Detrich III, H.W.1
Parker, S.K.2
Williams Jr., R.C.3
Nogales, E.4
Downing, K.H.5
-
12
-
-
12144285051
-
Molecular adaptation in the ice worm, Mesenchytraeus solifugus: divergence of energetic-associated genes
-
Farrell A.H., Hohenstein K.A., and Shain D.H. Molecular adaptation in the ice worm, Mesenchytraeus solifugus: divergence of energetic-associated genes. J. Mol. Evol. 59 (2004) 666-673
-
(2004)
J. Mol. Evol.
, vol.59
, pp. 666-673
-
-
Farrell, A.H.1
Hohenstein, K.A.2
Shain, D.H.3
-
13
-
-
1842509102
-
Psychrophilic enzymes: hot topics in cold adaptation
-
Feller G., and Gerday C. Psychrophilic enzymes: hot topics in cold adaptation. Nat. Rev. Microbiol. 1 (2003) 200-208
-
(2003)
Nat. Rev. Microbiol.
, vol.1
, pp. 200-208
-
-
Feller, G.1
Gerday, C.2
-
15
-
-
27144505097
-
Protein identification and analysis tools on the ExPASy Server
-
Walker J.M. (Ed), Humana Press
-
Gasteiger E., et al. Protein identification and analysis tools on the ExPASy Server. In: Walker J.M. (Ed). The Proteomics Protocols Handbook (2005), Humana Press 571-607
-
(2005)
The Proteomics Protocols Handbook
, pp. 571-607
-
-
Gasteiger, E.1
-
17
-
-
0015118513
-
Ultrastructure of the epidermis in the ice worm, Mesenchytraeus solifugus
-
Goodman D., and Parrish W.B. Ultrastructure of the epidermis in the ice worm, Mesenchytraeus solifugus. J. Morphol. 135 (1971) 71-86
-
(1971)
J. Morphol.
, vol.135
, pp. 71-86
-
-
Goodman, D.1
Parrish, W.B.2
-
18
-
-
0034956675
-
Mutagenesis of beta-tubulin cysteine residues in Saccharomyces cerevisiae: mutation of cysteine 354 results in cold-stable microtubules
-
Gupta Jr. M.L., Bode C.J., Dougherty C.A., Marquez R.T., and Himes R.H. Mutagenesis of beta-tubulin cysteine residues in Saccharomyces cerevisiae: mutation of cysteine 354 results in cold-stable microtubules. Cell Motil. Cytoskeleton. 49 (2001) 67-77
-
(2001)
Cell Motil. Cytoskeleton.
, vol.49
, pp. 67-77
-
-
Gupta Jr., M.L.1
Bode, C.J.2
Dougherty, C.A.3
Marquez, R.T.4
Himes, R.H.5
-
19
-
-
0033616712
-
Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species
-
Haney P.L., Badger J.H., Buldak G.L., Reich C.I., Woese C.R., and Olsen G.J. Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species. Proc. Natl. Acad. Sci. U.S.A. 96 (1999) 3578-3583
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 3578-3583
-
-
Haney, P.L.1
Badger, J.H.2
Buldak, G.L.3
Reich, C.I.4
Woese, C.R.5
Olsen, G.J.6
-
20
-
-
28244480349
-
Distribution and phylogeny of glacier ice worms (Mesenchytraeus solifugus and Mesenchytraeus solifugus rainierensis)
-
Hartzell P.L., Nghiem J.V., Richio K.J., and Shain D.H. Distribution and phylogeny of glacier ice worms (Mesenchytraeus solifugus and Mesenchytraeus solifugus rainierensis). Can. J. Zool. - Revue Canadienne de Zoologie 83 (2005) 1206-1213
-
(2005)
Can. J. Zool. - Revue Canadienne de Zoologie
, vol.83
, pp. 1206-1213
-
-
Hartzell, P.L.1
Nghiem, J.V.2
Richio, K.J.3
Shain, D.H.4
-
21
-
-
51249097597
-
1-ATP synthase complex in the ice worm, Mesenchytraeus solifugus (Annelida, Clitellata, Enchytraeidae)
-
1-ATP synthase complex in the ice worm, Mesenchytraeus solifugus (Annelida, Clitellata, Enchytraeidae). Hydrobiologia 564 (2006) 51-58
-
(2006)
Hydrobiologia
, vol.564
, pp. 51-58
-
-
Hohenstein, K.A.1
H Shain, D.2
-
22
-
-
0035125071
-
Structural models for the self-assembly and microtubule interactions of gamma-, delta- and epsilon-tubulin
-
Inclán Y.F., and Nogales E. Structural models for the self-assembly and microtubule interactions of gamma-, delta- and epsilon-tubulin. J. Cell. Sci. 114 (2001) 413-422
-
(2001)
J. Cell. Sci.
, vol.114
, pp. 413-422
-
-
Inclán, Y.F.1
Nogales, E.2
-
23
-
-
0035346185
-
Swiss-PDB viewer (Deep View): biomolecular graphics
-
Kaplan W., and Littlejohn T.G. Swiss-PDB viewer (Deep View): biomolecular graphics. Brief. Bioinformatics. 2 (2001) 195-197
-
(2001)
Brief. Bioinformatics.
, vol.2
, pp. 195-197
-
-
Kaplan, W.1
Littlejohn, T.G.2
-
24
-
-
0020475449
-
A simple method for displaying the hydropathic character of a protein
-
Kyte J., and Doolittle R.F. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157 (1982) 105-132
-
(1982)
J. Mol. Biol.
, vol.157
, pp. 105-132
-
-
Kyte, J.1
Doolittle, R.F.2
-
25
-
-
0036774026
-
Microtubule structure at 8 Å resolution
-
Li H., DeRosier D.J., Nicholson W.V., Nogales E., and Downing K.H. Microtubule structure at 8 Å resolution. Structure 10 (2002) 1317-1328
-
(2002)
Structure
, vol.10
, pp. 1317-1328
-
-
Li, H.1
DeRosier, D.J.2
Nicholson, W.V.3
Nogales, E.4
Downing, K.H.5
-
27
-
-
0035834521
-
Refined structure of a/b-tubulin at 3.5 Å resolution
-
Löwe J., Li H., Downing K.H., and Nogales E. Refined structure of a/b-tubulin at 3.5 Å resolution. J. Mol. Biol. 313 (2001) 1045-1057
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 1045-1057
-
-
Löwe, J.1
Li, H.2
Downing, K.H.3
Nogales, E.4
-
28
-
-
0032586910
-
Identification of betaIII- and betaIV-tubulin isotypes in cold-adapted microtubules from Atlantic cod (Gadus morhua): antibody mapping and cDNA sequencing
-
Modig C., et al. Identification of betaIII- and betaIV-tubulin isotypes in cold-adapted microtubules from Atlantic cod (Gadus morhua): antibody mapping and cDNA sequencing. Cell Motil. Cytoskeleton 42 (1999) 315-330
-
(1999)
Cell Motil. Cytoskeleton
, vol.42
, pp. 315-330
-
-
Modig, C.1
-
29
-
-
0034708365
-
Expression of cold-adapted beta-tubulins confer cold-tolerance to human cellular microtubules
-
Modig C., Wallin M., and Olsson P.E. Expression of cold-adapted beta-tubulins confer cold-tolerance to human cellular microtubules. Biochem. Biophys. Res. 269 (2000) 787-791
-
(2000)
Biochem. Biophys. Res.
, vol.269
, pp. 787-791
-
-
Modig, C.1
Wallin, M.2
Olsson, P.E.3
-
30
-
-
3242875611
-
Four kingdoms on glacier ice: convergent energetic processes boost energy levels as temperatures fall
-
Napolitano M.J., and Shain D.H. Four kingdoms on glacier ice: convergent energetic processes boost energy levels as temperatures fall. Proc. Biol. 5 (2004) 273-276
-
(2004)
Proc. Biol.
, vol.5
, pp. 273-276
-
-
Napolitano, M.J.1
Shain, D.H.2
-
31
-
-
18644375051
-
Distinctions in adenylate metabolism among organisms inhabiting temperature extremes
-
Napolitano M.J., and Shain D.H. Distinctions in adenylate metabolism among organisms inhabiting temperature extremes. Extremophiles 9 (2005) 93-98
-
(2005)
Extremophiles
, vol.9
, pp. 93-98
-
-
Napolitano, M.J.1
Shain, D.H.2
-
32
-
-
0347285247
-
Ice worms elevate adenylate levels at low physiological temperature
-
Napolitano M.J., Nagele R.O., and Shain D.H. Ice worms elevate adenylate levels at low physiological temperature. Comp. Biochem. Physiol. A. 137 (2004) 227-235
-
(2004)
Comp. Biochem. Physiol. A.
, vol.137
, pp. 227-235
-
-
Napolitano, M.J.1
Nagele, R.O.2
Shain, D.H.3
-
33
-
-
0042378798
-
The polymerization of actin: thermodynamics near the polymerization line
-
Niranjan P.S., et al. The polymerization of actin: thermodynamics near the polymerization line. J. Chem. Phys. 119 (2003) 4070-4084
-
(2003)
J. Chem. Phys.
, vol.119
, pp. 4070-4084
-
-
Niranjan, P.S.1
-
36
-
-
1542313976
-
Meiosis-specific failure of cell cycle progression in fission yeast by mutation of a conserved beta-tubulin residue
-
Paluh J.L., Killilea A.N., Detrich III H.W., and Downing K.H. Meiosis-specific failure of cell cycle progression in fission yeast by mutation of a conserved beta-tubulin residue. Mol. Biol. Cell. 15 (2004) 1160-1171
-
(2004)
Mol. Biol. Cell.
, vol.15
, pp. 1160-1171
-
-
Paluh, J.L.1
Killilea, A.N.2
Detrich III, H.W.3
Downing, K.H.4
-
37
-
-
20644440618
-
Evolution, organization, and expression of alpha-tubulin genes in the antarctic fish Notothenia coriiceps. Adaptive expansion of a gene family by recent gene duplication, inversion, and divergence
-
Parker S.K., and Detrich III H.W. Evolution, organization, and expression of alpha-tubulin genes in the antarctic fish Notothenia coriiceps. Adaptive expansion of a gene family by recent gene duplication, inversion, and divergence. J. Biol. Chem. 273 (1998) 34358-34369
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 34358-34369
-
-
Parker, S.K.1
Detrich III, H.W.2
-
38
-
-
0036783049
-
Characterization of the cold-adapted alpha-tubulin from the psychrophilic ciliate Euplotes focardii
-
Pucciarelli S., and Miceli C. Characterization of the cold-adapted alpha-tubulin from the psychrophilic ciliate Euplotes focardii. Extremophiles 6 (2002) 385-389
-
(2002)
Extremophiles
, vol.6
, pp. 385-389
-
-
Pucciarelli, S.1
Miceli, C.2
-
39
-
-
4644267074
-
Posttranslational modification of brain tubulins from the Antarctic Fish Notothenia coriiceps: reduced C-terminal glutamylation correlates with efficient microtubule assembly at low temperature
-
Redeker V., Frankfurter A., Parker S.K., Rossier J., and Detrich III H.W. Posttranslational modification of brain tubulins from the Antarctic Fish Notothenia coriiceps: reduced C-terminal glutamylation correlates with efficient microtubule assembly at low temperature. Biochemistry 43 (2004) 12265-12274
-
(2004)
Biochemistry
, vol.43
, pp. 12265-12274
-
-
Redeker, V.1
Frankfurter, A.2
Parker, S.K.3
Rossier, J.4
Detrich III, H.W.5
-
40
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook J., Fritsch E.M., and Maniatis T. Molecular Cloning. A Laboratory Manual (1989), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
(1989)
Molecular Cloning. A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.M.2
Maniatis, T.3
-
41
-
-
0033667850
-
Morphologic characterization of the ice worm, Mesenchytraeus solifugus
-
Shain D.H., et al. Morphologic characterization of the ice worm, Mesenchytraeus solifugus. J. Morphol. 246 (2000) 192-197
-
(2000)
J. Morphol.
, vol.246
, pp. 192-197
-
-
Shain, D.H.1
-
42
-
-
0035657064
-
Distribution and behavior of ice worms (Mesenchytraeus solifugus) in south-central Alaska
-
Shain D.H., Mason T.A., Farrell A.H., and Michalewicz L.A. Distribution and behavior of ice worms (Mesenchytraeus solifugus) in south-central Alaska. Can. J. Zool. 79 (2001) 1813-1821
-
(2001)
Can. J. Zool.
, vol.79
, pp. 1813-1821
-
-
Shain, D.H.1
Mason, T.A.2
Farrell, A.H.3
Michalewicz, L.A.4
-
43
-
-
24344448645
-
Role of disulfide bridges in the activity and stability of a cold-active alpha-amylase
-
Siddiqui K.S., et al. Role of disulfide bridges in the activity and stability of a cold-active alpha-amylase. J. Bacteriol. 187 (2005) 6206-6212
-
(2005)
J. Bacteriol.
, vol.187
, pp. 6206-6212
-
-
Siddiqui, K.S.1
-
45
-
-
0030978807
-
How tubulin subunits dissociate from the shortening ends of microtubules
-
Tran P.T., Joshi P., and Salmon E.D. How tubulin subunits dissociate from the shortening ends of microtubules. J. Struct. Biol. 118 (1997) 107-118
-
(1997)
J. Struct. Biol.
, vol.118
, pp. 107-118
-
-
Tran, P.T.1
Joshi, P.2
Salmon, E.D.3
-
46
-
-
0001759004
-
Glacier oligochaeta from Mt. Rainier
-
Welch P.S. Glacier oligochaeta from Mt. Rainier. Science 43 (1916) 143
-
(1916)
Science
, vol.43
, pp. 143
-
-
Welch, P.S.1
-
47
-
-
0033180374
-
Protein adaptation to low temperatures: a comparative study of alpha-tubulin sequences in mesophilic and psychrophilic algae
-
Willem S., Srahna M., Devos N., Gerday C., Loppes R., and Matagne R.G. Protein adaptation to low temperatures: a comparative study of alpha-tubulin sequences in mesophilic and psychrophilic algae. Extremophiles 3 (1999) 221-226
-
(1999)
Extremophiles
, vol.3
, pp. 221-226
-
-
Willem, S.1
Srahna, M.2
Devos, N.3
Gerday, C.4
Loppes, R.5
Matagne, R.G.6
-
48
-
-
0001933731
-
The Muir glacier
-
Wright G.F. The Muir glacier. Am. J. Sci. 33 (1887) 5
-
(1887)
Am. J. Sci.
, vol.33
, pp. 5
-
-
Wright, G.F.1
-
49
-
-
0032511034
-
The major adult alpha-globin gene of Antarctic telosts and its remnants in the hemoglobinless icefishes: calibrations of the mutational clock for nuclear genes
-
Zhao Y., et al. The major adult alpha-globin gene of Antarctic telosts and its remnants in the hemoglobinless icefishes: calibrations of the mutational clock for nuclear genes. J. Biol. Chem. 273 (1998) 14745-14752
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 14745-14752
-
-
Zhao, Y.1
|