Control of peripheral light-harvesting complex synthesis by a bacteriophytochrome in the aerobic photosynthetic bacterium Bradyrhizobium strain BTAi1

Journal of Bacteriology

Volumn 190, Issue 17, 2008, Pages 5824-5831

  Jaubert, Marianne ^a   Vuillet, Laurie ^a   Hannibal, Laure ^a   Adriano, Jean Marc ^b,c,d   Fardoux, Joël ^a   Bouyer, Pierre ^b,c,d   Bonaldi, Katia ^a   Fleischman, Darrell ^e   Giraud, Eric ^a   Verméglio, André ^b,c,d  

^a LABORATOIRE DES SYMBIOSES TROPICALES ET MÉDITERRANÉENNES   (France)

^b IRFM   (France)

^c CNRS   (France)

^d AIX MARSEILLE UNIVERSITY   (France)

^e WRIGHT STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL PROTEIN; BPHP PROTEIN; PHYTOCHROME; UNCLASSIFIED DRUG;

ABSORPTION; ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BRADYRHIZOBIUM; CONTROLLED STUDY; ENERGY; FLUORESCENCE; GENE EXPRESSION; LIGHT HARVESTING SYSTEM; LOW TEMPERATURE; NONHUMAN; OPERON; PHOTOOXIDATION; PHOTOSYNTHESIS; PHOTOTROPHIC BACTERIUM; PRIORITY JOURNAL; PUCBA GENE; RHODOPSEUDOMONAS PALUSTRIS;

AEROBIOSIS; BACTERIAL PROTEINS; BRADYRHIZOBIUM; LIGHT-HARVESTING PROTEIN COMPLEXES; OPERON; PHENOTYPE; PHOTOSYNTHESIS; PHYLOGENY; PROTEIN KINASES; SIGNAL TRANSDUCTION;

BRADYRHIZOBIUM; BRADYRHIZOBIUM SP.; PHOTOBACTERIA; RHODOPSEUDOMONAS PALUSTRIS;

EID: 50249140104     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.00524-08     Document Type: Article

References (35)

1. Bateman, A., L. Coin, R. Durbin, R. D. Finn, V. Hollich, S. Griffiths-Jones, A. Khanna, M. Marshall, S. Moxon, E. L. Sonnhammer, D. J. Studholme, C. Yeats, and S. R. Eddy. 2004. The Pfam protein families database. Nucleic Acids Res. 32:138-141.
2. Berkelman, T. R., and J. C. Lagarias. 1986. Visualization of bilin-linkcd peptides and proteins in polyacrylamide gels. Anal. Biochem. 156:195-201.
3. Borucki, B., D. von Stetten, S. Seibeck, T. Lamparter, N. Michael, M. A. Mroginski, H. Otto, D. H. Murgida, M. P. Heyn, and P. Hildebrandt. 2005. Light-induced proton release of phytochrome is coupled to the transient deprotonation of the tetrapyrrole chromophore. J. Biol. Chem. 280:34358-34364.
4. Cogdell, R. J., I. Durant, J. Valentine, J. G. Lindsay, and K. Schmidt. 1983. The isolation and partial characterisation of the light-harvesting pigment-protein complexes of Rhodopseudomonas acidophila. Biochim. Biophys. Acta 722:427-435.
5. Drews, G., and J. R. Golecki. 1995. Structure, molecular organization, and biosynthesis of membranes of purple bacteria, p. 725-745. In R. E. Blankenship, M. T. Madigan, and C. E. Bauer (ed.), Anoxygcnic photosynthetic bacteria. Kluwer Academic, Dordrecht, The Netherlands.
6. Eilfeld, P., and W. Rüdiger. 1985. Absorption spectra of phytochrome intermediates. Z. Naturforsch. 40:109-114.
7. Elsen, S., M. Jaubert, D. Pignol, and E. Giraud. 2005. PpsR: a multifaccted regulator of photosynthesis gene expression in purple bacteria. Mol. Microbiol. 57:17-26.
8. Gardiner, A. T., R. J. Cogdell, and S. Takaichi. 1993. The effect of changes in light intensity and temperature on the peripheral antenna of Rhodopseudomonas acidophila. Photosynth. Res. 38:159-167.
9. Giraud, E., J. Fardoux, N. Fourrier, L. Hannibal, B. Genty, P. Bouyer, B. Dreyfus, and A. Verméglio. 2002. Bacteriophytochrome controls photosyslem synthesis in anoxygcnic bacteria. Nature 417:202-205.
10. Giraud, E., and D. Fleischman. 2004. Nitrogen-fixing symbiosis between photosynthetic bacteria and legumes. Photosynth. Res. 82:115-130.
11. Giraud, E., and A. Verméglio. Bacteriophytochromes in anoxygenic photosynthetic bacteria. Photosynth. Res., in press.
12. Giraud, E., L. Hannibal, J. Fardoux, M. Jaubert, P. Jourand, B. Dreyfus, J. N. Sturgis, and A. Verméglio. 2004. Two distinct crt gene clusters for two different functional classes of carotcnoid in Bradyrhizobium. J. Biol. Chem. 279:15076-15083.
13. Giraud, E., L. Hannibal, J. Fardoux, A. Verméglio, and B. Dreyfus. 2000. Effect of Bradyrhizobium photosynthesis on stem nodulation of Aeschynomene sensitiva. Proc. Natl. Acad. Sci. USA 97:14795- 14800.
14. Giraud, E., S. Zappa, M. Jaubert, L. Hannibal, J. Fardoux, J.-M. Adriano, P. Bouyer, G. Genty, D. Pignol, and A. Verméglio. 2004. Bacteriophytochrome and regulation of the synthesis of the photosynthetic apparatus in Rhodopseudomonas palustris: pitfalls of using laboratory strains. Photochem. Photobiol. Sci. 3:587-591.
15. Giraud, E., S. Zappa, L. Vuillet, J.-M. Adriano, L. Hannibal, J. Fardoux, C. Berthomieu, P. Bouyer, D. Pignol, and A. Verméglio. 2005. A new type of bacteriophytochrome acts in tandem with a classical bacteriophytochrome to control the antennae synthesis in Rhodopseudomonas palustris. J. Biol. Chem. 280:32389-32397.
16. Hartigan, N., H. A. Tharia, F. Sweeney, A. M. Lawless, and M. Z. Papiz. 2002. The 7.5-Å electron density and spectroscopic properties of a novel low-light B800 LH2 from Rhodopseudomonas palustris. Biophys. J. 82:963-977.
17. Jaschke, P. R., H. N. LeBlanc, A. S. Lang, and J. T. Beatty. 2008. The PucC protein of Rhodobacter capsulatus mitigates an inhibitory effect of light-harvesting 2 and 2 proteins on light-harvesting complex 1. Photosynth. Res. 95:279-284.
18. Jaubert, M., J. Lavergne, J. Fardoux, L. Hannibal, L. Vuillet, J.-M. Adriano, P. Bouyer, D. Pignol, E. Giraud, and A. Verméglio. 2007. A singular bacteriophytochrome acquired by lateral gene transfer. J. Biol. Chem. 282:7320-7328.
19. Jaubert, M., S. Zappa, J. Fardoux, J.-M. Adriano, L. Hannibal, S. Elsen, J. Lavergne, A. Verméglio, E. Giraud, and D. Pignol. 2004. Light and redox control of photosynthesis gene expression in Bradyrhizobium: dual roles of two PpsR. J. Biol. Chem. 279:44407-44416.
20. Kokotek, W., and W. Lotz. 1989. Construction of a larZ-kanamycin-resistance cassette, useful for site-directed mutagenesis and as a promoter probe. Gene 84:467-471.
21. Lorquin, J., F. Molouba, and B. L. Dreyfus. 1997. Identification of the carotenoid pigment canthaxanthin from photosynthetic Bradyrhizobium strains. Appl. Environ. Microbiol. 63:1151-1154.
22. Quandt, J., and M. F. Hynes. 1993. Versatile suicide vectors which allow direct selection for gene replacement in gram-negative bacteria. Gene 127: 15-21.
23. Shiba, T., U. Simidu, and N. Taga. 1979. Distribution of aerobic bacteria which contain bacteriochlorophyll a. Appl. Environ. Microbiol. 38:43-45.
24. Shimada, K., H. Hayashi, and M. Tasumi. 1985. Bactcriochlorophyll- protein complexes of aerobic bacteria, Erythrobacter longus and Erythrobacter species OCh114. Arch. Microbiol. 143:244-247.
25. Shimada, K., H. Hayashi, T. Noguchi, and M. Tasumi. 1990. Excitation and emission spectroscopy of membranes and pigment-protein complexes of an aerobic photosynthetic bacterium, Erythrobacter sp. Och114. Plant Cell Physiol. 31:395-398.
26. Steunou, A.-S., S. Ouchane, F. Reiss-Husson, and C. Astier. 2004. Involvement of the C-terminal extension of the alpha polypeptide and of the PucC protein in LH2 complex biosynthesis in Rubrivivax gelatinosus. J. Bacteriol. 186:3143-3152.
27. Swingley, W. D., S. Sadekar, S. D. Mastrian, H. J. Matthies, J. Hao, H. Ramos, C. R. Acharya, A. L. Conrad, H. L. Taylor, L. C. Dejesa, M. K. Shah, M. E. O'huallachain, M. T. Lince, R. E. Blankenship, J. T. Beatty, and J. W. Touchman. 2007. The complete genome sequence of Roseobacter denitrificans reveals a mixotrophic rather than photosynthetic metabolism. J. Bacteriol. 189:683-690.
28. Tharia, H. A., T. D. Nightingale, M. Z. Papiz, and A. M. Lawless. 1999. Characterisation of hydrophobic peptides by RP-HPLC from different spectral forms of LH2 isolated from Rhodopseudomonas palustris. Photosynth. Res. 61:157-167.
29. van Berkum, P., and B. D. Eardly. 2002. The aquatic budding bacterium Blastobacter denitrificans is a nitrogen-fixing symbiont of Aeschynomene indica. Appl. Environ. Microbiol. 68:1132-1136.
30. van Berkum, P., J. M. Leibold, and B. D. Eardly. 2006. Proposal for combining Bradyrhizobium spp. (Aeschynomene indica) with Blastobacter denitrificans and to transfer Blastobacter denitrificans (Hirsch and Muller, 1985) to the genus Bradyrhizobium as Bradyrhizobium denitrificans (comb. nov.). Syst. Appl. Microbiol. 29:207-215.
31. Vuillet, L., M. Kojadinovic, S. Zappa, M. Jaubert, J. M. Adriano, J. Fardoux, L. Hannibal, D. Pignol, A. Verméglio, and E. Giraud. 2007. Evolution from light to redox sensing for a bacteriophytochrome. EMBO J. 26:3322-3331.
32. Yurkov, V., and J. T. Beatty. 1998. Aerobic anoxygenic phototrophic bacteria. Microbiol. Mol. Biol. Rev. 62:695-724.
33. Yurkov, V., N. Gad'on, A. Angerhofer, and G. Drews. 1994. Light-harvesting complexes of aerobic bacteriochlorophyll-containing bacteria Roseococcus thiosulfatophilus, RB3 and Erythromicrobium ramosum, E5 and the transfer of excitation energy from carotenoids to bacteriochlorophyll. Z. Naturforsch. 49:579-586.
34. Yurkov, V., E. Stackebrandt, O. Buss, A. Verméglio, V. Gorlenko, and J. T. Beatty. 1997. Reorganization of the genus Erythromicrobium: description of "Erythromicrobium sibiricum" as Sandaracinobacter sibiricus gen. nov., sp. nov., and of "Erythromicrobium ursincola" as Erythromonas ursincola, gen. nov., sp. nov. Int. J. Syst. Bacteriol. 47:1172-1178.
35. Zeng, X., M. Choudhary, and S. Kaplan. 2003. A second and unusual pucBA operon of Rhodobacter sphaeroides 2.4.1: genetics and function of the encoded polypeptides. J. Bacteriol. 185:6171-6184.