메뉴 건너뛰기




Volumn 4983 LNBI, Issue , 2008, Pages 481-491

Stepped linear regression to accurately assess statistical significance in batch confounded differential expression analysis

Author keywords

Batch effect; Differential expression; Microarray; SAM

Indexed keywords

ACOUSTIC MICROSCOPES; AMPLITUDE MODULATION; BIOCOMMUNICATIONS; BIOINFORMATICS; ESTIMATION; FOOD PROCESSING; INFORMATION SCIENCE; MISSILE BASES; REGRESSION ANALYSIS;

EID: 49949112042     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-79450-9_45     Document Type: Conference Paper
Times cited : (3)

References (11)
  • 2
    • 0035942271 scopus 로고    scopus 로고
    • Significance analysis of microarrays applied to the ionizing radiation response
    • Tusher, V.G., Tibshirani, R., Chu, G.: Significance analysis of microarrays applied to the ionizing radiation response. Proc. Natl. Acad. Sci. USA. 98, 5116-5121 (2001)
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 5116-5121
    • Tusher, V.G.1    Tibshirani, R.2    Chu, G.3
  • 3
    • 49949086111 scopus 로고    scopus 로고
    • Chu G, Narasimhan B, Tibshirani R, Tusher V.G, SAM, significance Analysis of Microarrays, Users guide and technical document
    • Chu G., Narasimhan B., Tibshirani R., Tusher V.G.: SAM, significance Analysis of Microarrays, Users guide and technical document
  • 4
    • 35648948791 scopus 로고    scopus 로고
    • Adaptive Expression Responses in the Pol-gamma Null Strain Depleted of Mitochondrial Genome in 5. pombe
    • Chu, Z., Li., K.R.K.M., Lin, K., Liu, J.: Adaptive Expression Responses in the Pol-gamma Null Strain Depleted of Mitochondrial Genome in 5. pombe. BMC Genomics 8, 323 (2007)
    • (2007) BMC Genomics , vol.8 , pp. 323
    • Chu, Z.1    Li, K.R.K.M.2    Lin, K.3    Liu, J.4
  • 5
    • 33845432928 scopus 로고    scopus 로고
    • Adjusting batch effects in microarray expression data using empirical Bayes methods
    • Johnson, W.E., Li, C., Rabinovic, A.: Adjusting batch effects in microarray expression data using empirical Bayes methods. Biostatistics 8(1), 118-127 (2007)
    • (2007) Biostatistics , vol.8 , Issue.1 , pp. 118-127
    • Johnson, W.E.1    Li, C.2    Rabinovic, A.3
  • 6
    • 0242333835 scopus 로고    scopus 로고
    • Normalization of cDNA microarray data
    • Smyth, G.K., Speed, T.: Normalization of cDNA microarray data. Methods 31(4), 265-273 (2003)
    • (2003) Methods , vol.31 , Issue.4 , pp. 265-273
    • Smyth, G.K.1    Speed, T.2
  • 7
  • 9
    • 0038053153 scopus 로고    scopus 로고
    • Statistical adjustment of signal censoring in gene expression experiments
    • Wit, E., McClure, J.: Statistical adjustment of signal censoring in gene expression experiments. Bioinformatics 19(9), 1055-1060 (2003)
    • (2003) Bioinformatics , vol.19 , Issue.9 , pp. 1055-1060
    • Wit, E.1    McClure, J.2
  • 10
    • 28444438861 scopus 로고    scopus 로고
    • A note on using permutation-based false discovery rate estimates to compare different analysis methods for microarray data
    • Xie, Y., Pan, W., Khodursky, A.B.: A note on using permutation-based false discovery rate estimates to compare different analysis methods for microarray data. Bioinformatics 21(23), 4280-4288 (2005)
    • (2005) Bioinformatics , vol.21 , Issue.23 , pp. 4280-4288
    • Xie, Y.1    Pan, W.2    Khodursky, A.B.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.