-
1
-
-
0033569406
-
Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring
-
Golub, T.R., Slonim, D.K., Tamayo, P., Huard, C., Gaasenbeek, M., et al.: Molecular classification of cancer: Class discovery and class prediction by gene expression monitoring. Science 286, 531-537 (1999)
-
(1999)
Science
, vol.286
, pp. 531-537
-
-
Golub, T.R.1
Slonim, D.K.2
Tamayo, P.3
Huard, C.4
Gaasenbeek, M.5
-
2
-
-
0036534202
-
DNA microarrays in clinical oncology
-
Ramaswamy, S., Golub, T.R.: DNA microarrays in clinical oncology. J. Clin. Oncol. 20, 1932-1941 (2002)
-
(2002)
J. Clin. Oncol
, vol.20
, pp. 1932-1941
-
-
Ramaswamy, S.1
Golub, T.R.2
-
3
-
-
9244229940
-
-
Fridlyand, J., Pinkel, S.A., Albertson, D., Jain, D.G.: AN: Hidden Markov Models Approach to the Analysis of Array CGH Data. J. Multivariate Anal. 90, 132-153 (2004)
-
Fridlyand, J., Pinkel, S.A., Albertson, D., Jain, D.G.: AN: Hidden Markov Models Approach to the Analysis of Array CGH Data. J. Multivariate Anal. 90, 132-153 (2004)
-
-
-
-
4
-
-
12344297384
-
Change-point analysis of array-based comparative genomic hybridization data
-
Olshen, A., Venkatraman, E.: Change-point analysis of array-based comparative genomic hybridization data. In: Proceedings of Joint Statistical Meetings, pp. 2530-2535 (2002)
-
(2002)
Proceedings of Joint Statistical Meetings
, pp. 2530-2535
-
-
Olshen, A.1
Venkatraman, E.2
-
5
-
-
0035179871
-
Assembly of microarrays for genome-wide measurement of DNA copy number
-
Snijders, A.M., Nowak, N., Segraves, R., Blackwood, S., Brown, N., et al.: Assembly of microarrays for genome-wide measurement of DNA copy number. Nat. Genet. 29, 263-264 (2001)
-
(2001)
Nat. Genet
, vol.29
, pp. 263-264
-
-
Snijders, A.M.1
Nowak, N.2
Segraves, R.3
Blackwood, S.4
Brown, N.5
-
6
-
-
12444256820
-
A method for calling gains and losses in array CGH data
-
Wang, P., Kim, Y., Pollack, J., Narasimhan, B., Tibshirani, R.: A method for calling gains and losses in array CGH data. Biostatistics 6, 45-58 (2005)
-
(2005)
Biostatistics
, vol.6
, pp. 45-58
-
-
Wang, P.1
Kim, Y.2
Pollack, J.3
Narasimhan, B.4
Tibshirani, R.5
-
7
-
-
4644286709
-
Genomic and expression profiling of chromosome 17 in breast cancer reveals complex patterns of alterations and novel candidate genes
-
Orsetti, B., Nugoli, M., Cervera, N., Lasorsa, L., Chuchana, P., et al.: Genomic and expression profiling of chromosome 17 in breast cancer reveals complex patterns of alterations and novel candidate genes. Cancer Res. 64, 6453-6460 (2004)
-
(2004)
Cancer Res
, vol.64
, pp. 6453-6460
-
-
Orsetti, B.1
Nugoli, M.2
Cervera, N.3
Lasorsa, L.4
Chuchana, P.5
-
8
-
-
18344392446
-
Identification of amplified and expressed genes in breast cancer by comparative hybridization onto microarrays of randomly selected cDNA clones
-
Clark, J., Edwards, S., John, M., Flohr, P., Gordon, T., et al.: Identification of amplified and expressed genes in breast cancer by comparative hybridization onto microarrays of randomly selected cDNA clones. Genes Chromosomes Cancer 34, 104-114 (2002)
-
(2002)
Genes Chromosomes Cancer
, vol.34
, pp. 104-114
-
-
Clark, J.1
Edwards, S.2
John, M.3
Flohr, P.4
Gordon, T.5
-
9
-
-
0035890381
-
New amplified and highly expressed genes discovered in the ERBB2 amplicon in breast cancer by cDNA microarrays
-
Kauraniemi, P., Barlund, M., Monni, O., Kallioniemi, A.: New amplified and highly expressed genes discovered in the ERBB2 amplicon in breast cancer by cDNA microarrays. Cancer Res. 61, 8235-8240 (2001)
-
(2001)
Cancer Res
, vol.61
, pp. 8235-8240
-
-
Kauraniemi, P.1
Barlund, M.2
Monni, O.3
Kallioniemi, A.4
-
10
-
-
14344280240
-
Comprehensive copy number and gene expression profiling of the 17q23 amplicon in human breast cancer
-
Monni, O., Barlund, M., Mousses, S., Kononen, J., Sauter, G., et al.: Comprehensive copy number and gene expression profiling of the 17q23 amplicon in human breast cancer. PNAS 98, 5711-5716 (2001)
-
(2001)
PNAS
, vol.98
, pp. 5711-5716
-
-
Monni, O.1
Barlund, M.2
Mousses, S.3
Kononen, J.4
Sauter, G.5
-
11
-
-
13844250828
-
Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors
-
Pollack, J.R., Sorlie, T., Perou, C.M., Rees, C.A., Jeffrey, S.S., Lonning, P.E., Tibshirani, R., Botstein, D., Borresen-Dale, A.L., Brown, P.O.: Microarray analysis reveals a major direct role of DNA copy number alteration in the transcriptional program of human breast tumors. PNAS 99, 12963-12968 (2002)
-
(2002)
PNAS
, vol.99
, pp. 12963-12968
-
-
Pollack, J.R.1
Sorlie, T.2
Perou, C.M.3
Rees, C.A.4
Jeffrey, S.S.5
Lonning, P.E.6
Tibshirani, R.7
Botstein, D.8
Borresen-Dale, A.L.9
Brown, P.O.10
-
12
-
-
0036829790
-
Impact of DNA amplification on gene expression patterns in breast cancer
-
Hyman, E., Kauraniemi, P., Hautaniemi, S., Wolf, M., Mousses, S., et al.: Impact of DNA amplification on gene expression patterns in breast cancer. Cancer Res. 62, 6240-6245 (2002)
-
(2002)
Cancer Res
, vol.62
, pp. 6240-6245
-
-
Hyman, E.1
Kauraniemi, P.2
Hautaniemi, S.3
Wolf, M.4
Mousses, S.5
-
13
-
-
0035890378
-
The consequences of chromosomal aneuploidy on gene expression profiles in a cell line model for prostate carcinogenesis
-
Phillips, J.L., Hayward, S.W., Wang, Y., Vasselli, J., Pavlovich, C., et al.: The consequences of chromosomal aneuploidy on gene expression profiles in a cell line model for prostate carcinogenesis. Cancer Res. 61, 8143-8149 (2001)
-
(2001)
Cancer Res
, vol.61
, pp. 8143-8149
-
-
Phillips, J.L.1
Hayward, S.W.2
Wang, Y.3
Vasselli, J.4
Pavlovich, C.5
-
14
-
-
0035970039
-
Expression profiling reveals fundamental biological differences in acute myeloid leukemia with isolated trisomy 8 and normal cytogenetics
-
Virtaneva, K., Wright, F.A., Tanner, S.M., Yuan, B., Lemon, W.J., et al.: Expression profiling reveals fundamental biological differences in acute myeloid leukemia with isolated trisomy 8 and normal cytogenetics. PNAS 98, 1124-1129 (2001)
-
(2001)
PNAS
, vol.98
, pp. 1124-1129
-
-
Virtaneva, K.1
Wright, F.A.2
Tanner, S.M.3
Yuan, B.4
Lemon, W.J.5
-
15
-
-
0036570356
-
Targets of gene amplification and overexpression at 17q in gastric cancer
-
Varis, A., Wolf, M., Monni, O., Vakkari, M.L., Kokkola, A., et al.: Targets of gene amplification and overexpression at 17q in gastric cancer. Cancer Res. 62, 2625-2629 (2002)
-
(2002)
Cancer Res
, vol.62
, pp. 2625-2629
-
-
Varis, A.1
Wolf, M.2
Monni, O.3
Vakkari, M.L.4
Kokkola, A.5
-
16
-
-
10744220575
-
Gene expression patterns and gene copy number changes in dermatofibrosarcoma protuberans
-
Linn, S.C., West, R.B., Pollack, J.R., Zhu, S., Hernandez-Boussard, T., et al.: Gene expression patterns and gene copy number changes in dermatofibrosarcoma protuberans. Am J. Pathol. 163, 2383-2395 (2003)
-
(2003)
Am J. Pathol
, vol.163
, pp. 2383-2395
-
-
Linn, S.C.1
West, R.B.2
Pollack, J.R.3
Zhu, S.4
Hernandez-Boussard, T.5
-
17
-
-
17444446946
-
Widespread aneuploidy revealed by DNA microarray expression profiling
-
Hughes, T.R., Roberts, C.J., Dai, H., Jones, A.R., Meyer, M.R., et al.: Widespread aneuploidy revealed by DNA microarray expression profiling. Nat. Genet. 25, 333-337 (2000)
-
(2000)
Nat. Genet
, vol.25
, pp. 333-337
-
-
Hughes, T.R.1
Roberts, C.J.2
Dai, H.3
Jones, A.R.4
Meyer, M.R.5
-
18
-
-
27644488026
-
Diffuse large B-cell lymphoma subgroups have distinct genetic profiles that influence tumor biology and improve gene-expression-based survival prediction
-
Bea, S., Zettl, A., Wright, G., Salaverria, I., Jehn, P., et al.: Diffuse large B-cell lymphoma subgroups have distinct genetic profiles that influence tumor biology and improve gene-expression-based survival prediction. Blood 106, 3183-3190 (2005)
-
(2005)
Blood
, vol.106
, pp. 3183-3190
-
-
Bea, S.1
Zettl, A.2
Wright, G.3
Salaverria, I.4
Jehn, P.5
-
19
-
-
34247116019
-
Specific Secondary Genetic Alterations in Mantle Cell Lymphoma Provide Prognostic Information Independent of the Gene Expression-Based Proliferation Signature
-
Salaverria, I., Zettl, A., Bea, S., Moreno, V., Valls, J., et al.: Specific Secondary Genetic Alterations in Mantle Cell Lymphoma Provide Prognostic Information Independent of the Gene Expression-Based Proliferation Signature. J. Clin. Oncol. 25, 1216-1222 (2007)
-
(2007)
J. Clin. Oncol
, vol.25
, pp. 1216-1222
-
-
Salaverria, I.1
Zettl, A.2
Bea, S.3
Moreno, V.4
Valls, J.5
-
20
-
-
49949118128
-
-
submitted
-
Iqbal, J., DeLeeuw, R.J., Srivastava, G., Geng, H., Patel, K., et al.: High resolution genomic mapping and gene expression analysis of chromosomal aberrations in natural killer malignancies (submitted)
-
High resolution genomic mapping and gene expression analysis of chromosomal aberrations in natural killer malignancies
-
-
Iqbal, J.1
DeLeeuw, R.J.2
Srivastava, G.3
Geng, H.4
Patel, K.5
-
21
-
-
7244245762
-
Finishing the euchromatic sequence of the human genome
-
Finishing the euchromatic sequence of the human genome. Nature 431, 931-945 (2004)
-
(2004)
Nature
, vol.431
, pp. 931-945
-
-
-
22
-
-
33748491517
-
The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements
-
Shi, L., Reid, L.H., Jones, W.D., Shippy, R., Warrington, J.A., et al.: The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements. Nature biotechnology 24, 1151-1161 (2006)
-
(2006)
Nature biotechnology
, vol.24
, pp. 1151-1161
-
-
Shi, L.1
Reid, L.H.2
Jones, W.D.3
Shippy, R.4
Warrington, J.A.5
-
23
-
-
0003516147
-
-
Cambridge Unisersity Press, New York
-
Durbin, R., Eddy, S., Krogh, A., Mitchison, G.: Biological sequence analysis: Probabilistic models of proteins and necleic acids. Cambridge Unisersity Press, New York (1998)
-
(1998)
Biological sequence analysis: Probabilistic models of proteins and necleic acids
-
-
Durbin, R.1
Eddy, S.2
Krogh, A.3
Mitchison, G.4
-
24
-
-
49949115601
-
-
Lymphoma/Leukemia Molecular Profiling Project LLMPP
-
Lymphoma/Leukemia Molecular Profiling Project (LLMPP), http://www.cancerdiagnosis.nei.nih.gov/specs/index.htm
-
-
-
-
26
-
-
49949112250
-
-
NCBI: Homo sapiens (human.) genome view (2006), http: //www.ncbi.nlm.nih.gov/projects/mapview/map_search.cgi?taxid=9606
-
NCBI: Homo sapiens (human.) genome view (2006), http: //www.ncbi.nlm.nih.gov/projects/mapview/map_search.cgi?taxid=9606
-
-
-
|