-
1
-
-
0037187833
-
A mixture model approach for the analysis of microarray gene expression data
-
Allison D.B., Gadbury G.L., Heo M., Fernanfez J.R., Lee C., Prolla T.A., Weindruch R. A mixture model approach for the analysis of microarray gene expression data. Comput. Statist. Data Anal. 39:2002;1-20.
-
(2002)
Comput. Statist. Data Anal.
, vol.39
, pp. 1-20
-
-
Allison, D.B.1
Gadbury, G.L.2
Heo, M.3
Fernanfez, J.R.4
Lee, C.5
Prolla, T.A.6
Weindruch, R.7
-
2
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Benjamini Y., Hochberg Y. Controlling the false discovery rate. a practical and powerful approach to multiple testing J. Roy. Statist. Soc. B. 57:1995;289-300.
-
(1995)
J. Roy. Statist. Soc. B
, vol.57
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
3
-
-
0344837173
-
Two staged linear step up FDR controlling procedure
-
Department of Statistics and Operation Research, Tel-Aviv University, and Department of Statistics, Wharton School, University of Pennsylvania
-
Benjamini, Y., Krieger, A., Yekutieli, D., 2001. Two staged linear step up FDR controlling procedure. Technical Report, Department of Statistics and Operation Research, Tel-Aviv University, and Department of Statistics, Wharton School, University of Pennsylvania.
-
(2001)
Technical Report
-
-
Benjamini, Y.1
Krieger, A.2
Yekutieli, D.3
-
4
-
-
0035733108
-
The control of the false discovery rate in multiple testing under dependency
-
Benjamini Y., Yekutieli D. The control of the false discovery rate in multiple testing under dependency. Ann. Statist. 29:2001;1165-1188.
-
(2001)
Ann. Statist.
, vol.29
, pp. 1165-1188
-
-
Benjamini, Y.1
Yekutieli, D.2
-
5
-
-
14844364789
-
Post-analysis follow-up and validation of microarray experiments
-
Chuaqui R.F., Bonner R.F., Best C.J., Gillespie J.W., Flaig M.J., Hewitt S.M., Phillips J.L., Krizman D.B., Tangrea M.A., Ahram M., Linehan W.M., Knezevic V., Emmert-Buck M.R. Post-analysis follow-up and validation of microarray experiments. Nat. Genet. 32(Suppl.):2002;509-514.
-
(2002)
Nat. Genet.
, vol.32
, Issue.SUPPL.
, pp. 509-514
-
-
Chuaqui, R.F.1
Bonner, R.F.2
Best, C.J.3
Gillespie, J.W.4
Flaig, M.J.5
Hewitt, S.M.6
Phillips, J.L.7
Krizman, D.B.8
Tangrea, M.A.9
Ahram, M.10
Linehan, W.M.11
Knezevic, V.12
Emmert-Buck, M.R.13
-
6
-
-
0038645938
-
Identification of novel cellular targets in biliary tract cancers using global gene expression technology
-
Hansel D.E., Rahman A., Hidalgo M., Thuluvath P.J., Lillemoe K.D., Shulick R., Ku J.L., Park J.G., Miyazaki K., Ashfaq R., Wistuba I.I., Varma R., Hawthorne L., Geradts J., Argani P., Maitra A. Identification of novel cellular targets in biliary tract cancers using global gene expression technology. Amer. J. Pathol. 163:2003;217-229.
-
(2003)
Amer. J. Pathol.
, vol.163
, pp. 217-229
-
-
Hansel, D.E.1
Rahman, A.2
Hidalgo, M.3
Thuluvath, P.J.4
Lillemoe, K.D.5
Shulick, R.6
Ku, J.L.7
Park, J.G.8
Miyazaki, K.9
Ashfaq, R.10
Wistuba, I.I.11
Varma, R.12
Hawthorne, L.13
Geradts, J.14
Argani, P.15
Maitra, A.16
-
7
-
-
0035931947
-
Gene-expression profiles in hereditary breast cancer
-
Hedenfalk I., Duggan D., Chen Y., Radmacher M., Bittner M., Simon R., Meltzer P., Gusterson B., Esteller M., Raffeld M., Yakhini Z., Ben-Dor A., Dougherty E.R., Kononen J., Bubendorf L., Fehrle W., Pittaluga S., Gruvberger S., Loman N., Johannsson O., Olsson H., Wilfond B., Sauter G., Kallioniemi O.-P., Borg A., Trent J. Gene-expression profiles in hereditary breast cancer. New Engl. J. Med. 344:2001;539-548.
-
(2001)
New Engl. J. Med.
, vol.344
, pp. 539-548
-
-
Hedenfalk, I.1
Duggan, D.2
Chen, Y.3
Radmacher, M.4
Bittner, M.5
Simon, R.6
Meltzer, P.7
Gusterson, B.8
Esteller, M.9
Raffeld, M.10
Yakhini, Z.11
Ben-Dor, A.12
Dougherty, E.R.13
Kononen, J.14
Bubendorf, L.15
Fehrle, W.16
Pittaluga, S.17
Gruvberger, S.18
Loman, N.19
Johannsson, O.20
Olsson, H.21
Wilfond, B.22
Sauter, G.23
Kallioniemi, O.-P.24
Borg, A.25
Trent, J.26
more..
-
8
-
-
0037369731
-
Interferon alfa regulated gene expression in patients initiating interferon treatment for chronic hepatitis C
-
Ji X., Cheung R., Cooper S., Li Q., Greenberg H.B., He X.S. Interferon alfa regulated gene expression in patients initiating interferon treatment for chronic hepatitis C. Hepatology. 37:2003;610-621.
-
(2003)
Hepatology
, vol.37
, pp. 610-621
-
-
Ji, X.1
Cheung, R.2
Cooper, S.3
Li, Q.4
Greenberg, H.B.5
He, X.S.6
-
9
-
-
0037114470
-
Power and sample size for DNA microarray studies
-
Lee M.-L., Whitmore G.A. Power and sample size for DNA microarray studies. Statist. Med. 21:2002;3543-3570.
-
(2002)
Statist. Med.
, vol.21
, pp. 3543-3570
-
-
Lee, M.-L.1
Whitmore, G.A.2
-
10
-
-
0034923013
-
On differential variability of expression ratios: Improving statistical inference about gene expression changes from microarray data
-
Newton M.A., Kendziorski C.M., Richmond C.S., Blattner F.R., Tsui K.W. On differential variability of expression ratios. improving statistical inference about gene expression changes from microarray data J. Comput. Biol. 8:2001;37-52.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 37-52
-
-
Newton, M.A.1
Kendziorski, C.M.2
Richmond, C.S.3
Blattner, F.R.4
Tsui, K.W.5
-
11
-
-
2642537531
-
On partial least squares dimension reduction for microarray-based classification: A simulation study
-
in press
-
Nguyen, D.V., Rocke, D.M., 2004. On partial least squares dimension reduction for microarray-based classification: a simulation study. Comput. Statist. Data Anal., in press.
-
(2004)
Comput. Statist. Data Anal.
-
-
Nguyen, D.V.1
Rocke, D.M.2
-
12
-
-
12244284624
-
DNA Microarray experiments: Biological and technological aspects
-
Nguyen D.V., Arpat A.B., Wang N., Carroll R.J. DNA Microarray experiments. biological and technological aspects Biometrics. 58:2002;701-717.
-
(2002)
Biometrics
, vol.58
, pp. 701-717
-
-
Nguyen, D.V.1
Arpat, A.B.2
Wang, N.3
Carroll, R.J.4
-
13
-
-
0036051492
-
How many replicates of arrays are required to detect gene expression changes in microarray experiments? A mixture model approach
-
Pan W., Lin J., Le C.T. How many replicates of arrays are required to detect gene expression changes in microarray experiments? A mixture model approach. Genome Biol. 3:2002;1-10.
-
(2002)
Genome Biol.
, vol.3
, pp. 1-10
-
-
Pan, W.1
Lin, J.2
Le, C.T.3
-
14
-
-
0000992959
-
Plot of p -values to evaluate many tests simultaneously
-
Schweder T., Spj ø vtoll E. Plot of. p -values to evaluate many tests simultaneously Biometrika. 69:1982;493-502.
-
(1982)
Biometrika
, vol.69
, pp. 493-502
-
-
Schweder, T.1
Spjøvtoll, E.2
-
15
-
-
0036020892
-
A direct approach to false discovery rates
-
Storey J.D. A direct approach to false discovery rates. J. Roy. Statist. Soc. B. 64:2002;479-498.
-
(2002)
J. Roy. Statist. Soc. B
, vol.64
, pp. 479-498
-
-
Storey, J.D.1
-
16
-
-
0345822598
-
The positive false discovery rate: A Bayesian interpretation and the q -value
-
Storey J.D. The positive false discovery rate. a Bayesian interpretation and the q -value Ann. Statist. 31:2003;2013-2035.
-
(2003)
Ann. Statist.
, vol.31
, pp. 2013-2035
-
-
Storey, J.D.1
-
17
-
-
0003670427
-
Estimating false discovery rates under dependence, with applications to DNA microarrays
-
Department of Statistics, Stanford University
-
Storey, J.D., Tibshirani, R., 2001. Estimating false discovery rates under dependence, with applications to DNA microarrays. Technical Report 2001-28, Department of Statistics, Stanford University.
-
(2001)
Technical Report
, vol.2001
, Issue.28
-
-
Storey, J.D.1
Tibshirani, R.2
-
18
-
-
0042424602
-
Statistical significance for genomewide studies
-
Storey J.D., Tibshirani R. Statistical significance for genomewide studies. Proc. Nat. Acad. Sci. USA. 100:2003;9440-9445.
-
(2003)
Proc. Nat. Acad. Sci. USA
, vol.100
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
19
-
-
0035942271
-
Significance analysis of microarrays applied to the ionizing radiation response
-
Tusher V.G., Tibshirani R., Chu G. Significance analysis of microarrays applied to the ionizing radiation response. Proc. Nat. Acad. Sci. USA. 98:2001;5116-5121.
-
(2001)
Proc. Nat. Acad. Sci. USA
, vol.98
, pp. 5116-5121
-
-
Tusher, V.G.1
Tibshirani, R.2
Chu, G.3
-
20
-
-
0038697346
-
Statistical methods for analyzing microarray feature data with replications
-
Yang Y., Hoh J., Broger C., Neeb M., Edington J., Lindpaintner K., Ott J. Statistical methods for analyzing microarray feature data with replications. J. Comput. Biol. 10:2003;157-169.
-
(2003)
J. Comput. Biol.
, vol.10
, pp. 157-169
-
-
Yang, Y.1
Hoh, J.2
Broger, C.3
Neeb, M.4
Edington, J.5
Lindpaintner, K.6
Ott, J.7
-
21
-
-
1842535253
-
Microarray experimental design: Power and sample size considerations
-
Yang M.C.K., Yang J.J., McIndoe R.A., She J.X. Microarray experimental design. power and sample size considerations Physiol Genomics. 16:2003;24-28.
-
(2003)
Physiol Genomics
, vol.16
, pp. 24-28
-
-
Yang, M.C.K.1
Yang, J.J.2
McIndoe, R.A.3
She, J.X.4
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