메뉴 건너뛰기




Volumn , Issue , 2007, Pages 153-158

Classification of cell membrane proteins

Author keywords

[No Author keywords available]

Indexed keywords

AMINES; AMINO ACIDS; CYTOLOGY; FORECASTING; INFORMATION TECHNOLOGY; MEMBRANES; ORGANIC ACIDS; PROTEINS; STATISTICAL TESTS; TECHNOLOGY; TESTING;

EID: 49349090113     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/FBIT.2007.21     Document Type: Conference Paper
Times cited : (21)

References (29)
  • 1
    • 33748449804 scopus 로고    scopus 로고
    • Using stacked generalization to predict membrane protein types based on pseudo amino acid composition
    • S. Q. Wang, J. Yang, K.-C. Chou, "Using stacked generalization to predict membrane protein types based on pseudo amino acid composition", Journal of Theoretical Biology, (2006), Vol. 242, pp. 941-46.
    • (2006) Journal of Theoretical Biology , vol.242 , pp. 941-946
    • Wang, S.Q.1    Yang, J.2    Chou, K.-C.3
  • 2
    • 0032910566 scopus 로고    scopus 로고
    • Prediction of membrane protein types and subcellular locations, Proteins
    • K.-C. Chou and D. W. Elrod, "Prediction of membrane protein types and subcellular locations", Proteins: Proteins: Structure, Function, and Genetics, (1999), Vol. 34, 137-53
    • (1999) Proteins: Structure, Function, and Genetics , vol.34 , pp. 137-153
    • Chou, K.-C.1    Elrod, D.W.2
  • 3
    • 0035874091 scopus 로고    scopus 로고
    • K.-C. Chou. Prediction of protein cellular attributes using pseudo amino acid composition, Proteins: Structure, Function, and Genetics, (Erratum: Proteins: Structure, Function, and Genetics, 44, 60) (2001), 43, 246-55.
    • K.-C. Chou. "Prediction of protein cellular attributes using pseudo amino acid composition", Proteins: Structure, Function, and Genetics, (Erratum: Proteins: Structure, Function, and Genetics, Vol. 44, 60) (2001), Vol. 43, 246-55.
  • 4
    • 0003128793 scopus 로고
    • Prediction of protein structural classes from amino acid composition
    • GD. Fasman, editor, New York: Plenum Press
    • PY. Chou, "Prediction of protein structural classes from amino acid composition". In: GD. Fasman, editor. "Prediction of protein structure and the principles of protein conformation". New York: Plenum Press, (1989), pp. 549-586.
    • (1989) Prediction of protein structure and the principles of protein conformation , pp. 549-586
    • Chou, P.Y.1
  • 5
    • 0022631926 scopus 로고
    • The folding type of a protein is relevant to the amino acid composition
    • H. Nakashima, K. Nishikawa and T. Ooi. "The folding type of a protein is relevant to the amino acid composition", Journal of Biochemistry, (1986), Vol. 99, pp. 152-162.
    • (1986) Journal of Biochemistry , vol.99 , pp. 152-162
    • Nakashima, H.1    Nishikawa, K.2    Ooi, T.3
  • 6
    • 0031588694 scopus 로고    scopus 로고
    • Relation between amino acid composition and cellular location of proteins
    • J. Cedano, P. Aloy, J.A. Perezpons and E. Querol. "Relation between amino acid composition and cellular location of proteins", Journal of Molecular Biology, (1997), Vol. 266, pp. 594-600.
    • (1997) Journal of Molecular Biology , vol.266 , pp. 594-600
    • Cedano, J.1    Aloy, P.2    Perezpons, J.A.3    Querol, E.4
  • 8
    • 8444248846 scopus 로고    scopus 로고
    • Weighted-support vector machines for predicting membrane protein types based on pseudo-amino acid composition
    • Wang M., Yang J., Liu G. P., K.-C. Chou, "Weighted-support vector machines for predicting membrane protein types based on pseudo-amino acid composition", Journal of Protein Engineering Design and Selection, (2004), Vol. 17, pp. 509-16
    • (2004) Journal of Protein Engineering Design and Selection , vol.17 , pp. 509-516
    • Wang, M.1    Yang, J.2    Liu, G.P.3    Chou, K.-C.4
  • 9
    • 33748150984 scopus 로고    scopus 로고
    • Fuzzy KNN for predicting membrane protein types from pseoudo-amino acid composition
    • H.-B. Shen, J. Yang and K.-C. Chou, "Fuzzy KNN for predicting membrane protein types from pseoudo-amino acid composition", Journal of Theoretical Biology, (2006), Vol. 240, pp. 9-13
    • (2006) Journal of Theoretical Biology , vol.240 , pp. 9-13
    • Shen, H.-B.1    Yang, J.2    Chou, K.-C.3
  • 10
    • 22144487766 scopus 로고    scopus 로고
    • Using optimized evidence-theoretic K-nearest neighbor classifier and pseudo-amino acid composition to predict membrane protein types
    • H.-B. Shen, K.-C. Chou, "Using optimized evidence-theoretic K-nearest neighbor classifier and pseudo-amino acid composition to predict membrane protein types." Biochemical and Biophysical Research Communications, (2005), Vol. 334, pp. 288-92.
    • (2005) Biochemical and Biophysical Research Communications , vol.334 , pp. 288-292
    • Shen, H.-B.1    Chou, K.-C.2
  • 12
    • 34249074523 scopus 로고    scopus 로고
    • Using ensemble classifier to identify membrane protein types
    • H.-B. Shen and K.-C. Chou, "Using ensemble classifier to identify membrane protein types", Amino Acids, (2007), Vol. 32, pp. 483-8.
    • (2007) Amino Acids , vol.32 , pp. 483-488
    • Shen, H.-B.1    Chou, K.-C.2
  • 13
    • 0037423777 scopus 로고    scopus 로고
    • Support vector machines for prediction of protein domain structural class
    • Y. Cai, X. J. Liu, X. B. Xu, and K.-C. Chou, "Support vector machines for prediction of protein domain structural class", Journal of Theoretical Biology, (2003), Vol. 221, pp. 115-20.
    • (2003) Journal of Theoretical Biology , vol.221 , pp. 115-120
    • Cai, Y.1    Liu, X.J.2    Xu, X.B.3    Chou, K.-C.4
  • 15
    • 0029387830 scopus 로고
    • Neural Networks for Full-Scale Protein Sequence Classification: Sequence Encoding with Singular Value Decomposition
    • C. H. Wu, M. Berry, Y. S. Fung, and J. McLarty, "Neural Networks for Full-Scale Protein Sequence Classification: Sequence Encoding with Singular Value Decomposition", Machine Learning (1995), Vol. 21, pp 177-93.
    • (1995) Machine Learning , vol.21 , pp. 177-193
    • Wu, C.H.1    Berry, M.2    Fung, Y.S.3    McLarty, J.4
  • 17
    • 0004142031 scopus 로고    scopus 로고
    • Fifth edition, Houghton Mifflin Company
    • S. Zumdahl and S. Zumdahl, "Chemistry", Fifth edition, Houghton Mifflin Company, (2000).
    • (2000) Chemistry
    • Zumdahl, S.1    Zumdahl, S.2
  • 18
    • 0000330322 scopus 로고
    • Protein-protein interactions
    • D. F.Waugh, "Protein-protein interactions", Advances in Protein Chemistry, (1954), Vol. 9, 325-437.
    • (1954) Advances in Protein Chemistry , vol.9 , pp. 325-437
    • Waugh, D.F.1
  • 20
    • 0021691817 scopus 로고
    • Analysis of membrane and surface protein sequences with the hydrophobic moment plot
    • D. Eisenberg, E. Schwarz, M. Komaromy, and R. Wall, "Analysis of membrane and surface protein sequences with the hydrophobic moment plot", Journal of Molecular Biology, (1984), Vol. 179, 125-42.
    • (1984) Journal of Molecular Biology , vol.179 , pp. 125-142
    • Eisenberg, D.1    Schwarz, E.2    Komaromy, M.3    Wall, R.4
  • 21
    • 33747182577 scopus 로고    scopus 로고
    • Classifier ensembles for protein structural class prediction with varying homology
    • K. Kedarisetti, L. Kurgan, and S. Dick, "Classifier ensembles for protein structural class prediction with varying homology", Biochemical and Biophysical Research Communication, (2006), Vol. 348, pp. 981-8.
    • (2006) Biochemical and Biophysical Research Communication , vol.348 , pp. 981-988
    • Kedarisetti, K.1    Kurgan, L.2    Dick, S.3
  • 25
    • 28444439947 scopus 로고    scopus 로고
    • Using LogitBoost classifier to predict protein structural classes
    • Y.-D. Cai, K.-Y. Feng, W.-C. Lu, K.-C. Chou, "Using LogitBoost classifier to predict protein structural classes", Journal of Theoretical Biology, (2006), Vol. 238, pp. 172-6.
    • (2006) Journal of Theoretical Biology , vol.238 , pp. 172-176
    • Cai, Y.-D.1    Feng, K.-Y.2    Lu, W.-C.3    Chou, K.-C.4
  • 28
    • 54749084166 scopus 로고    scopus 로고
    • An intriguing controversy over protein structural class prediction
    • G.-P. Zhou, "An intriguing controversy over protein structural class prediction", Journal of Protein Chemistry, (1998), Vol. 17 pp. 729-38.
    • (1998) Journal of Protein Chemistry , vol.17 , pp. 729-738
    • Zhou, G.-P.1
  • 29
    • 0040348117 scopus 로고    scopus 로고
    • Classifying protein segments as transmembrane domains using architecture-altering operations in genetic programming
    • J.A. Peter and K.E. Kinnear, editors, MIT Press, Cambridge, MA, USA
    • J.R. Koza and D. Andre. "Classifying protein segments as transmembrane domains using architecture-altering operations in genetic programming". In J.A. Peter and K.E. Kinnear, editors, Advances in Genetic Programming II, MIT Press, Cambridge, MA, USA, (1996), pp. 155-76.
    • (1996) Advances in Genetic Programming II , pp. 155-176
    • Koza, J.R.1    Andre, D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.