메뉴 건너뛰기




Volumn 32, Issue 3, 2008, Pages 229-237

Mitochondrial DNA sequence and body size variations in Turkish sardine (Sardina pilchardus) stocks

Author keywords

Cytb; Genetic divergence; Mitochondrial DNA; Sardina pilchardus; Sardine

Indexed keywords

BODY SIZE; COASTAL WATER; CYTOCHROME; FISH; HOMOLOGY; MITOCHONDRIAL DNA; PHYLOGENETICS; POLYMERASE CHAIN REACTION; POPULATION GENETICS; STOCK ASSESSMENT;

EID: 48649095385     PISSN: 13000179     EISSN: 13036114     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (5)

References (38)
  • 2
    • 48649104144 scopus 로고    scopus 로고
    • Atarhouch, T., Rüber, L., Gonzalez, E. G., Albert, E. M. Rami, M., Dakkak, A. and Zardoya, R. 2005. Signature of an early genetic bottleneck in a population of Moroccan sardines (Sardina pilchardus). Molecular Phylogenetics and Evolution, In Press, Corrected Proof, Available online 7 October.
    • Atarhouch, T., Rüber, L., Gonzalez, E. G., Albert, E. M. Rami, M., Dakkak, A. and Zardoya, R. 2005. Signature of an early genetic bottleneck in a population of Moroccan sardines (Sardina pilchardus). Molecular Phylogenetics and Evolution, In Press, Corrected Proof, Available online 7 October.
  • 3
    • 0004187047 scopus 로고    scopus 로고
    • Harvard Univ. Press, Cambridge, MA, USA
    • Avise, J.C. 2000. Phylogeography. Harvard Univ. Press, Cambridge, MA, USA.
    • (2000) Phylogeography
    • Avise, J.C.1
  • 4
    • 8544270991 scopus 로고
    • The influence of hydroclimatic factors on the availability of the sardine (Sardina pilchardus, Walbaum) in the Moroccan Atlantic Fishery
    • Belveze, H. and Erzini, K. 1983. The influence of hydroclimatic factors on the availability of the sardine (Sardina pilchardus, Walbaum) in the Moroccan Atlantic Fishery. FAO Fish Rep. 291: pp. 285-328.
    • (1983) FAO Fish Rep , vol.291 , pp. 285-328
    • Belveze, H.1    Erzini, K.2
  • 5
    • 0025624023 scopus 로고
    • Small marine pelagic fish and the threat of fishing: Are they endangered
    • Beverton, R.J.H. 1990. Small marine pelagic fish and the threat of fishing: are they endangered. J. Fish Biol. 37: 5-16.
    • (1990) J. Fish Biol , vol.37 , pp. 5-16
    • Beverton, R.J.H.1
  • 6
    • 0036485812 scopus 로고    scopus 로고
    • Allozyme, mitochondrial-DNA, and morphometric variability indicate cryptic species of anchovy (Engraulis encrasicolus)
    • Borsa. P. 2002. Allozyme, mitochondrial-DNA, and morphometric variability indicate cryptic species of anchovy (Engraulis encrasicolus). Biol. J. the Linnean Soc. 75: 261-269.
    • (2002) Biol. J. the Linnean Soc , vol.75 , pp. 261-269
    • Borsa, P.1
  • 7
    • 11144353389 scopus 로고    scopus 로고
    • Nuclear-DNA markers confirm the presence of two anchovy species in the Mediterranean
    • Borsa, P., Collet, A. and Durand, J.D. 2004. Nuclear-DNA markers confirm the presence of two anchovy species in the Mediterranean. Comptes Rendus Biologies. 327: 1113-1123.
    • (2004) Comptes Rendus Biologies , vol.327 , pp. 1113-1123
    • Borsa, P.1    Collet, A.2    Durand, J.D.3
  • 8
    • 0001947514 scopus 로고
    • Evolution of animal mitochondrial DNA
    • eds. M. Nei and R.K. Koehn, Sinauer, Sunderland, Mass. pp
    • Brown, W.M. 1983. Evolution of animal mitochondrial DNA. In: Evolution of genes and proteins. (eds. M. Nei and R.K. Koehn), Sinauer, Sunderland, Mass. pp. 62-88.
    • (1983) Evolution of genes and proteins , pp. 62-88
    • Brown, W.M.1
  • 9
    • 0031112487 scopus 로고    scopus 로고
    • Chikhi, L., Agnese, J.F. and Bonhomme, F. 1997. Fortes differences des ADN mitochondriaux de populations de Sardinella aurita de la mer Mediterranee et de l'Atlantique Est. Comptes Rendus de l'Academie des Sciences-Series III-Sciences de la Vie 320: 289-297.
    • Chikhi, L., Agnese, J.F. and Bonhomme, F. 1997. Fortes differences des ADN mitochondriaux de populations de Sardinella aurita de la mer Mediterranee et de l'Atlantique Est. Comptes Rendus de l'Academie des Sciences-Series III-Sciences de la Vie 320: 289-297.
  • 10
    • 0029775341 scopus 로고    scopus 로고
    • Reproduction of European Pilchard, Sardina pilchardus (Walbaum, 1792) in the Aegean Sea
    • Cihangir, B. 1996. Reproduction of European Pilchard, Sardina pilchardus (Walbaum, 1792) in the Aegean Sea. Turk. J. Zool. 20: 33-50.
    • (1996) Turk. J. Zool , vol.20 , pp. 33-50
    • Cihangir, B.1
  • 11
    • 48649083613 scopus 로고    scopus 로고
    • DIE. 2004. 2004. Yili Su Ürünleri Istatistikleri. T.C. Başbakanlik Devlet Istatistik Enstitüsü, Ankara.
    • DIE. 2004. 2004. Yili Su Ürünleri Istatistikleri. T.C. Başbakanlik Devlet Istatistik Enstitüsü, Ankara.
  • 12
    • 48649102517 scopus 로고    scopus 로고
    • 1988-1997. Aquaculture Production Statistics
    • FAO, Rev, Rome
    • FAO, 1999. 1988-1997. Aquaculture Production Statistics. FAO Fisheries Circular, No: 815, Rev. 11, Rome.
    • (1999) FAO Fisheries Circular , Issue.815 , pp. 11
  • 13
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368-376.
    • (1981) J. Mol. Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 15
    • 0037129222 scopus 로고    scopus 로고
    • Fisheries productivity in the northeastern Pacific Ocean over the last 2200 years
    • Finney, B.P., Gregory-Eaves, I., Douglas, M.S.V. and Smol, J.P. 2002. Fisheries productivity in the northeastern Pacific Ocean over the last 2200 years. Nature 416: 729-33
    • (2002) Nature , vol.416 , pp. 729-733
    • Finney, B.P.1    Gregory-Eaves, I.2    Douglas, M.S.V.3    Smol, J.P.4
  • 16
    • 0031690476 scopus 로고    scopus 로고
    • Shallow population histories in deep evolutionary lineages of marine fishes: Insights from sardines and anchovies and lessons for conservation
    • Grant, W.A.S. and Bowen, B.W. 1998. Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation. J. Hered. 89: 415-426.
    • (1998) J. Hered , vol.89 , pp. 415-426
    • Grant, W.A.S.1    Bowen, B.W.2
  • 17
    • 0024486266 scopus 로고
    • Animal mitochondrial DNA as a tool in systematic and evolutionary biology
    • Harrison, R.G. 1989. Animal mitochondrial DNA as a tool in systematic and evolutionary biology. Trends in Ecology and Evolution. 5: 6-11.
    • (1989) Trends in Ecology and Evolution , vol.5 , pp. 6-11
    • Harrison, R.G.1
  • 18
    • 0037015074 scopus 로고    scopus 로고
    • Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus)
    • Hauser, L., Adcock, G.J., Smith, P.J., Ramirez, J.H.B. and Carvalho, G.R. 2002. Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus). Proc. Natl. Acad. Sci. USA 99: 11742-11747.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 11742-11747
    • Hauser, L.1    Adcock, G.J.2    Smith, P.J.3    Ramirez, J.H.B.4    Carvalho, G.R.5
  • 19
    • 0029860602 scopus 로고    scopus 로고
    • Some genetic consequences of ice ages, and their role in divergence and separation
    • Hewitt, G.M. 1996. Some genetic consequences of ice ages, and their role in divergence and separation. Biol. J. the Linean Soc. 58: 247-276.
    • (1996) Biol. J. the Linean Soc , vol.58 , pp. 247-276
    • Hewitt, G.M.1
  • 20
    • 0034710674 scopus 로고    scopus 로고
    • Collapse and recovery of marine fishes
    • Hutchings, J.A. 2000. Collapse and recovery of marine fishes. Nature 406. pp. 882-885.
    • (2000) Nature , vol.406 , pp. 882-885
    • Hutchings, J.A.1
  • 23
    • 48649091683 scopus 로고    scopus 로고
    • Kara, A. and Ozekinci, U. 2002. Izmir Körfezi'nde sardalya ( Sardina pilchardus Walbaum, 1792) baliǧi avciliǧinda kullanilan galsama aǧlarinin seçiciliǧi. E.U. J. Fish. & Aqua. Sci.: 465-472.
    • Kara, A. and Ozekinci, U. 2002. Izmir Körfezi'nde sardalya ( Sardina pilchardus Walbaum, 1792) baliǧi avciliǧinda kullanilan galsama aǧlarinin seçiciliǧi. E.U. J. Fish. & Aqua. Sci.: 465-472.
  • 24
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. 1980. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 16: 111-120.
    • (1980) J. Mol. Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 25
    • 0037304930 scopus 로고    scopus 로고
    • Fine-scaled geographical population structuring in a highly mobile marine species: The Atlantic cod
    • Knutsen, H., Jorde, P.E., André, C. and Stenseth, N.C. 2003. Fine-scaled geographical population structuring in a highly mobile marine species: the Atlantic cod. Mol. Ecol. 12: 385-394.
    • (2003) Mol. Ecol , vol.12 , pp. 385-394
    • Knutsen, H.1    Jorde, P.E.2    André, C.3    Stenseth, N.C.4
  • 26
    • 3242665463 scopus 로고    scopus 로고
    • Living with uncertainty: Genetic imprints of climate shifts in East Pacific anchovy (Engraulis mordax) and sardine ( Sardinops sagax)
    • Lecomte, F., Grant, W.S., Dodson, J.J., Rodriguez-Sanchez, R. and Bowen, B.W. 2004. Living with uncertainty: genetic imprints of climate shifts in East Pacific anchovy (Engraulis mordax) and sardine ( Sardinops sagax). Mol Ecol. 8: 2169-82.
    • (2004) Mol Ecol , vol.8 , pp. 2169-2182
    • Lecomte, F.1    Grant, W.S.2    Dodson, J.J.3    Rodriguez-Sanchez, R.4    Bowen, B.W.5
  • 27
    • 0030619684 scopus 로고    scopus 로고
    • Ramon, M.M. and Castro, J.A., 1997. Genetic variation in natural stocks of Sardina pilchardus (sardines) from the western Mediterranean Sea. Heredity 78: 520-528.
    • Ramon, M.M. and Castro, J.A., 1997. Genetic variation in natural stocks of Sardina pilchardus (sardines) from the western Mediterranean Sea. Heredity 78: 520-528.
  • 28
    • 0033213190 scopus 로고    scopus 로고
    • Microsatellite loci to determine population structure of the Patagonian toothfish Dissostichus eleginoides
    • Reilly, A. and Ward, D. 1999. Microsatellite loci to determine population structure of the Patagonian toothfish Dissostichus eleginoides. Mol. Ecol. 8: 1753-1768.
    • (1999) Mol. Ecol , vol.8 , pp. 1753-1768
    • Reilly, A.1    Ward, D.2
  • 29
    • 0034736514 scopus 로고    scopus 로고
    • Evolution of the mitochondrial genetic systems: An overview
    • Saccone, C., Gissi, C., Lanave, C., Larizza, A., Pesole, G. and Reyes, A. 2000. Evolution of the mitochondrial genetic systems: an overview. Gene 261: 153-159.
    • (2000) Gene , vol.261 , pp. 153-159
    • Saccone, C.1    Gissi, C.2    Lanave, C.3    Larizza, A.4    Pesole, G.5    Reyes, A.6
  • 30
    • 0023375195 scopus 로고
    • The Neighbor-joining Method: A new method for reconstructing phylogenetic trees
    • Saitou, N. and Nei, M. 1987. The Neighbor-joining Method: A new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4: 406-425.
    • (1987) Mol. Biol. Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 32
    • 0034070439 scopus 로고    scopus 로고
    • Molecular phylogeny of Philippine freshwater sardines based on mitochondrial DNA analysis
    • Samonte, I.E., Pagulayan, R.C. and Mayer, W.E. 2000. Molecular phylogeny of Philippine freshwater sardines based on mitochondrial DNA analysis. J. Hered. 91: 247-53.
    • (2000) J. Hered , vol.91 , pp. 247-253
    • Samonte, I.E.1    Pagulayan, R.C.2    Mayer, W.E.3
  • 33
    • 0034823681 scopus 로고    scopus 로고
    • Identification of anchovy (Engraulis encrasicholus L.) and gilt sardine ( Sardinella aurita) by polymerase chain reaction, sequence of their mitochondrial cytochrome b gene, and restriction analysis of polymerase chain reaction products in semipreserves
    • Sebastio, P., Zanelli, P. and Neri. T. M. 2001. Identification of anchovy (Engraulis encrasicholus L.) and gilt sardine ( Sardinella aurita) by polymerase chain reaction, sequence of their mitochondrial cytochrome b gene, and restriction analysis of polymerase chain reaction products in semipreserves. J. Agric. Food Chem. 49: 1194-9.
    • (2001) J. Agric. Food Chem , vol.49 , pp. 1194-1199
    • Sebastio, P.1    Zanelli, P.2    Neri, T.M.3
  • 34
    • 38249025111 scopus 로고
    • Genetic differences between populations of sardine, Sardina pilchardus, and anchovy, Engraulis encrasicolus, in Aegean and Ionian Seas
    • Spanakis, E., Tsimendies, N. and Zouros, E. 1989. Genetic differences between populations of sardine, Sardina pilchardus, and anchovy, Engraulis encrasicolus, in Aegean and Ionian Seas. J. Fish. Biol. 35: 417-437.
    • (1989) J. Fish. Biol , vol.35 , pp. 417-437
    • Spanakis, E.1    Tsimendies, N.2    Zouros, E.3
  • 35
    • 0029832514 scopus 로고    scopus 로고
    • Stock structure and homing fidelity in Gulf of Mexico sturgeon (Acipenser oxyrinchus desotoi) based on restriction fragment length polymorphism and sequence analyses of mitochondrial DNA
    • Stabile, J., Waldman, J.R., Parauka, F. and Wirgin, I. 1996. Stock structure and homing fidelity in Gulf of Mexico sturgeon (Acipenser oxyrinchus desotoi) based on restriction fragment length polymorphism and sequence analyses of mitochondrial DNA. Genetics 144: 767-75.
    • (1996) Genetics , vol.144 , pp. 767-775
    • Stabile, J.1    Waldman, J.R.2    Parauka, F.3    Wirgin, I.4
  • 36
    • 0036284493 scopus 로고    scopus 로고
    • Mitochondrial DNA sequence variation suggests the lack of genetic heterogeneity in the Adriatic and Ionian stocks of Sardina pilchardus
    • Tinti, F., Di Nunno, C., Guarniero, I., Talenti, M., Tommasini, S., Fabbri, E. and Piccinetti, C. 2002. Mitochondrial DNA sequence variation suggests the lack of genetic heterogeneity in the Adriatic and Ionian stocks of Sardina pilchardus. Mar. Biotechnol. 4: 163-72.
    • (2002) Mar. Biotechnol , vol.4 , pp. 163-172
    • Tinti, F.1    Di Nunno, C.2    Guarniero, I.3    Talenti, M.4    Tommasini, S.5    Fabbri, E.6    Piccinetti, C.7
  • 37
    • 48649087150 scopus 로고    scopus 로고
    • Türker, D. 1998. Ege Denizi Edremit körfezi'nde sardalya baliǧi Sardina pilchardus (Walbaum, 1792) un yumurta ve larvalarinin biyolojik ve ekolojik özellikleri üzerine bir araştirma. M. Sc.Thesis. University of Balikesir, Dept. Biol. Balikesir, 105 pp.
    • Türker, D. 1998. Ege Denizi Edremit körfezi'nde sardalya baliǧi Sardina pilchardus (Walbaum, 1792) un yumurta ve larvalarinin biyolojik ve ekolojik özellikleri üzerine bir araştirma. M. Sc.Thesis. University of Balikesir, Dept. Biol. Balikesir, 105 pp.
  • 38
    • 0037595585 scopus 로고    scopus 로고
    • Sardine fishing in the early 20th century
    • Williams, J.G. 2003. Sardine fishing in the early 20th century. Science 300: 2032.
    • (2003) Science , vol.300 , pp. 2032
    • Williams, J.G.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.