메뉴 건너뛰기




Volumn 20, Issue 4, 2008, Pages 1101-1117

Analysis of the Arabidopsis histidine kinase ATHK1 reveals a connection between vegetative osmotic stress sensing and seed maturation

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 48549105886     PISSN: 10404651     EISSN: 1532298X     Source Type: Journal    
DOI: 10.1105/tpc.107.055871     Document Type: Article
Times cited : (204)

References (55)
  • 1
    • 0031252084 scopus 로고    scopus 로고
    • Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression
    • Abe, H., Yamaguchi-Shinozaki, K., Urao, T., Iwasaki, T., Hosokawa, D., and Shinozaki, K. (1997). Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Plant Cell 9: 1859-1868.
    • (1997) Plant Cell , vol.9 , pp. 1859-1868
    • Abe, H.1    Yamaguchi-Shinozaki, K.2    Urao, T.3    Iwasaki, T.4    Hosokawa, D.5    Shinozaki, K.6
  • 2
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y., and Hochberg, Y. (1995). Controlling the false discovery rate: A practical and powerful approach to multiple testing. J. Roy. Stat. Soc. B 57: 289-300.
    • (1995) J. Roy. Stat. Soc. B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 3
    • 0037316303 scopus 로고    scopus 로고
    • A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    • Bolstad, B.M., Irizarry, R.A., Astrand, M., and Speed, T.P. (2003). A comparison of normalization methods for high density oligonucleotide array data based on variance and bias. Bioinformatics 19: 185-193.
    • (2003) Bioinformatics , vol.19 , pp. 185-193
    • Bolstad, B.M.1    Irizarry, R.A.2    Astrand, M.3    Speed, T.P.4
  • 5
    • 0031081346 scopus 로고    scopus 로고
    • Plant responses to water deficit
    • Bray, E.A. (1997). Plant responses to water deficit. Trends Plant Sci. 2: 48-54.
    • (1997) Trends Plant Sci , vol.2 , pp. 48-54
    • Bray, E.A.1
  • 6
    • 0042066361 scopus 로고    scopus 로고
    • A method for profiling classes of plant hormones and their metabolites using liquid chromatography-electrospray ionization tandem mass spectrometry: An analysis of hormone regulation of thermodormancy of lettuce (Lactuca sativa L.) seeds
    • Chiwocha, S.D., Abrams, S.R., Ambrose, S.J., Cutler, A.J., Loewen, M., Ross, A.R., and Kermode, A.R. (2003). A method for profiling classes of plant hormones and their metabolites using liquid chromatography-electrospray ionization tandem mass spectrometry: An analysis of hormone regulation of thermodormancy of lettuce (Lactuca sativa L.) seeds. Plant J. 35: 405-417.
    • (2003) Plant J , vol.35 , pp. 405-417
    • Chiwocha, S.D.1    Abrams, S.R.2    Ambrose, S.J.3    Cutler, A.J.4    Loewen, M.5    Ross, A.R.6    Kermode, A.R.7
  • 7
    • 0032447801 scopus 로고    scopus 로고
    • Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
    • Clough, S.J., and Bent, A.F. (1998). Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 16: 735-743.
    • (1998) Plant J , vol.16 , pp. 735-743
    • Clough, S.J.1    Bent, A.F.2
  • 9
    • 1842422544 scopus 로고    scopus 로고
    • Comparison of mRNA gene expression by RT-PCR and DNA microarray
    • Etienne, W., Meyer, M.H., Peppers, J., and Meyer, R.A., Jr. (2004). Comparison of mRNA gene expression by RT-PCR and DNA microarray. Biotechniques 36: 618-620.
    • (2004) Biotechniques , vol.36 , pp. 618-620
    • Etienne, W.1    Meyer, M.H.2    Peppers, J.3    Meyer Jr., R.A.4
  • 10
    • 0036270393 scopus 로고    scopus 로고
    • Abscisic acid signaling in seeds and seedlings
    • Finkelstein, R.R., Gampala, S.S., and Rock, C.D. (2002). Abscisic acid signaling in seeds and seedlings. Plant Cell 14(Suppl): S15-S45.
    • (2002) Plant Cell , vol.14 , Issue.SUPPL.
    • Finkelstein, R.R.1    Gampala, S.S.2    Rock, C.D.3
  • 11
    • 0347861780 scopus 로고    scopus 로고
    • C.R. Somerville and E.M. Meyerowitz, eds Rockville, MD:, doi/10.1199/tab.0058
    • Finkelstein, R.R., and Rock, C.D. (2002). Abscisic acid biosynthesis and response. In The Arabidopsis Book, C.R. Somerville and E.M. Meyerowitz, eds (Rockville, MD: American Society of Plant Biologists), doi/10.1199/tab.0058, http://www.aspb.org/publications/arabidopsis/.
    • (2002) In The Arabidopsis Book, Abscisic acid biosynthesis and response
    • Finkelstein, R.R.1    Rock, C.D.2
  • 12
    • 33947412321 scopus 로고    scopus 로고
    • GeneBins: A database for classifying gene expression data, with application to plant genome arrays
    • Goffard, N., and Weiller, G. (2007). GeneBins: A database for classifying gene expression data, with application to plant genome arrays. BMC Bioinformatics 8: 87.
    • (2007) BMC Bioinformatics , vol.8 , pp. 87
    • Goffard, N.1    Weiller, G.2
  • 13
    • 0025706143 scopus 로고
    • A plant leucine zipper protein that recognizes an abscisic acid response element
    • Guiltinan, M.J., Marcotte, W.R., Jr., and Quatrano, R.S. (1990). A plant leucine zipper protein that recognizes an abscisic acid response element. Science 250: 267-271.
    • (1990) Science , vol.250 , pp. 267-271
    • Guiltinan, M.J.1    Marcotte Jr., W.R.2    Quatrano, R.S.3
  • 14
    • 0032935808 scopus 로고    scopus 로고
    • Comparison of yeast cell protein solubilization procedures for two-dimensional electrophoresis
    • Harder, A., Wildgruber, R., Nawrocki, A., Fey, S.J., Larsen, P.M., and Gorg, A. (1999). Comparison of yeast cell protein solubilization procedures for two-dimensional electrophoresis. Electrophoresis 20: 826-829.
    • (1999) Electrophoresis , vol.20 , pp. 826-829
    • Harder, A.1    Wildgruber, R.2    Nawrocki, A.3    Fey, S.J.4    Larsen, P.M.5    Gorg, A.6
  • 16
    • 0035983611 scopus 로고    scopus 로고
    • Two-component signal transduction pathways in Arabidopsis
    • Hwang, I., Chen, H.C., and Sheen, J. (2002). Two-component signal transduction pathways in Arabidopsis. Plant Physiol. 129: 500-515.
    • (2002) Plant Physiol , vol.129 , pp. 500-515
    • Hwang, I.1    Chen, H.C.2    Sheen, J.3
  • 20
    • 0035206163 scopus 로고    scopus 로고
    • Abiotic stress signalling pathways: Specificity and cross-talk
    • Knight, H., and Knight, M.R. (2001). Abiotic stress signalling pathways: Specificity and cross-talk. Trends Plant Sci. 6: 262-267.
    • (2001) Trends Plant Sci , vol.6 , pp. 262-267
    • Knight, H.1    Knight, M.R.2
  • 21
    • 0001432263 scopus 로고
    • In vivo inhibition of seed development and reserve protein accumulation in recombinants of abscisic acid biosynthesis and responsiveness mutants in Arabidopsis thaliana
    • Koornneef, M., Hanhart, C.J., Hilhorst, H.W., and Karssen, C.M. (1989). In vivo inhibition of seed development and reserve protein accumulation in recombinants of abscisic acid biosynthesis and responsiveness mutants in Arabidopsis thaliana. Plant Physiol. 90: 463-469.
    • (1989) Plant Physiol , vol.90 , pp. 463-469
    • Koornneef, M.1    Hanhart, C.J.2    Hilhorst, H.W.3    Karssen, C.M.4
  • 22
    • 0033391482 scopus 로고    scopus 로고
    • T-DNA as an insertional mutagen in Arabidopsis
    • Krysan, P.J., Young, J.C., and Sussman, M.R. (1999). T-DNA as an insertional mutagen in Arabidopsis. Plant Cell 11: 2283-2290.
    • (1999) Plant Cell , vol.11 , pp. 2283-2290
    • Krysan, P.J.1    Young, J.C.2    Sussman, M.R.3
  • 23
    • 85047684232 scopus 로고    scopus 로고
    • Plant two-component signaling systems and the role of response regulators
    • Lohrmann, J., and Harter, K. (2002). Plant two-component signaling systems and the role of response regulators. Plant Physiol. 128: 363-369.
    • (2002) Plant Physiol , vol.128 , pp. 363-369
    • Lohrmann, J.1    Harter, K.2
  • 24
    • 0029873984 scopus 로고    scopus 로고
    • Molecular identification of zeaxanthin epoxidase of Nicotiana plumbaginifolia, a gene involved in abscisic acid biosynthesis and corresponding to the ABA locus of Arabidopsis thaliana
    • Marin, E., Nussaume, L., Quesada, A., Gonneau, M., Sotta, B., Hugueney, P., Frey, A., and Marion-Poll, A. (1996). Molecular identification of zeaxanthin epoxidase of Nicotiana plumbaginifolia, a gene involved in abscisic acid biosynthesis and corresponding to the ABA locus of Arabidopsis thaliana. EMBO J. 15: 2331-2342.
    • (1996) EMBO J , vol.15 , pp. 2331-2342
    • Marin, E.1    Nussaume, L.2    Quesada, A.3    Gonneau, M.4    Sotta, B.5    Hugueney, P.6    Frey, A.7    Marion-Poll, A.8
  • 25
    • 0028859591 scopus 로고
    • The G-box: A ubiquitous regulatory DNA element in plants bound by the GBF family of bZIP proteins
    • Menkes, A.E., Schindler, U., and Cashmore, A.R. (1995). The G-box: A ubiquitous regulatory DNA element in plants bound by the GBF family of bZIP proteins. Trends Biochem. Sci. 20: 506-510.
    • (1995) Trends Biochem. Sci , vol.20 , pp. 506-510
    • Menkes, A.E.1    Schindler, U.2    Cashmore, A.R.3
  • 26
    • 0025098288 scopus 로고
    • Nuclear proteins bind conserved elements in the abscisic acid-responsive promoter of a rice rab gene
    • Mundy, J., Yamaguchi-Shinozaki, K., and Chua, N.H. (1990). Nuclear proteins bind conserved elements in the abscisic acid-responsive promoter of a rice rab gene. Proc. Natl. Acad. Sci. USA 87: 1406-1410.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 1406-1410
    • Mundy, J.1    Yamaguchi-Shinozaki, K.2    Chua, N.H.3
  • 27
    • 84982358134 scopus 로고
    • A revised medium for rapid growth bioassays with tobacco tissue cultures
    • Murashige, T., and Skoog, F. (1962). A revised medium for rapid growth bioassays with tobacco tissue cultures. Physiol. Plant. 15: 473-497.
    • (1962) Physiol. Plant , vol.15 , pp. 473-497
    • Murashige, T.1    Skoog, F.2
  • 28
    • 0038338451 scopus 로고    scopus 로고
    • ABA action and interactions in seeds
    • Nambara, E., and Marion-Poll, A. (2003). ABA action and interactions in seeds. Trends Plant Sci. 8: 213-217.
    • (2003) Trends Plant Sci , vol.8 , pp. 213-217
    • Nambara, E.1    Marion-Poll, A.2
  • 29
    • 34248161925 scopus 로고    scopus 로고
    • Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana
    • Nelson, C.J., Huttlin, E.L., Hegeman, A.D., Harms, A.C., and Sussman, M.R. (2007). Implications of 15N-metabolic labeling for automated peptide identification in Arabidopsis thaliana. Proteomics 7: 1279-1292.
    • (2007) Proteomics , vol.7 , pp. 1279-1292
    • Nelson, C.J.1    Huttlin, E.L.2    Hegeman, A.D.3    Harms, A.C.4    Sussman, M.R.5
  • 31
    • 0000853884 scopus 로고
    • Molecular cloning, genomic organization, expression and evolution of 12S seed storage protein genes of Arabidopsis thaliana
    • Pang, P.P., Pruitt, R.E., and Meyerowitz, E.M. (1988). Molecular cloning, genomic organization, expression and evolution of 12S seed storage protein genes of Arabidopsis thaliana. Plant Mol. Biol. 11: 805-820.
    • (1988) Plant Mol. Biol , vol.11 , pp. 805-820
    • Pang, P.P.1    Pruitt, R.E.2    Meyerowitz, E.M.3
  • 32
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein identification by searching sequence databases using mass spectrometry data
    • Perkins, D.N., Pappin, D.J., Creasy, D.M., and Cottrell, J.S. (1999). Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20: 3551-3567.
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.2    Creasy, D.M.3    Cottrell, J.S.4
  • 33
    • 0038153182 scopus 로고    scopus 로고
    • Yeast osmosensor Sln1 and plant cytokinin receptor Cre1 respond to changes in turgor pressure
    • Reiser, V., Raitt, D.C., and Saito, H. (2003). Yeast osmosensor Sln1 and plant cytokinin receptor Cre1 respond to changes in turgor pressure. J. Cell Biol. 161: 1035-1040.
    • (2003) J. Cell Biol , vol.161 , pp. 1035-1040
    • Reiser, V.1    Raitt, D.C.2    Saito, H.3
  • 34
    • 0037311919 scopus 로고    scopus 로고
    • TM4: A free, open-source system for microarray data management and analysis
    • Saeed, A.I., et al. (2003). TM4: A free, open-source system for microarray data management and analysis. Biotechniques 34: 374-378.
    • (2003) Biotechniques , vol.34 , pp. 374-378
    • Saeed, A.I.1
  • 35
    • 9444225935 scopus 로고    scopus 로고
    • Java Treeview - Extensible visualization of microarray data
    • Saldanha, A.J. (2004). Java Treeview - Extensible visualization of microarray data. Bioinformatics 20: 3246-3248.
    • (2004) Bioinformatics , vol.20 , pp. 3246-3248
    • Saldanha, A.J.1
  • 36
    • 33645745237 scopus 로고    scopus 로고
    • Arabidopsis response regulators ARR3 and ARR4 play cytokinin-independent roles in the control of circadian period
    • Salomé, P.A., To, J.P., Kieber, J.J., and McClung, C.R. (2006). Arabidopsis response regulators ARR3 and ARR4 play cytokinin-independent roles in the control of circadian period. Plant Cell 18: 55-69.
    • (2006) Plant Cell , vol.18 , pp. 55-69
    • Salomé, P.A.1    To, J.P.2    Kieber, J.J.3    McClung, C.R.4
  • 38
    • 2642613677 scopus 로고    scopus 로고
    • Biochemical characterization of the aba2 and aba3 mutants in Arabidopsis thaliana
    • Schwartz, S.H., Leon-Kloosterziel, K.M., Koornneef, M., and Zeevaart, J.A. (1997). Biochemical characterization of the aba2 and aba3 mutants in Arabidopsis thaliana. Plant Physiol. 114: 161-166.
    • (1997) Plant Physiol , vol.114 , pp. 161-166
    • Schwartz, S.H.1    Leon-Kloosterziel, K.M.2    Koornneef, M.3    Zeevaart, J.A.4
  • 39
    • 0344511680 scopus 로고    scopus 로고
    • Elucidation of the indirect pathway of abscisic acid biosynthesis by mutants, genes, and enzymes
    • Schwartz, S.H., Qin, X., and Zeevaart, J.A. (2003). Elucidation of the indirect pathway of abscisic acid biosynthesis by mutants, genes, and enzymes. Plant Physiol. 131: 1591-1601.
    • (2003) Plant Physiol , vol.131 , pp. 1591-1601
    • Schwartz, S.H.1    Qin, X.2    Zeevaart, J.A.3
  • 40
    • 0036007393 scopus 로고    scopus 로고
    • Complex regulation of ABA biosynthesis in plants
    • Seo, M., and Koshiba, T. (2002). Complex regulation of ABA biosynthesis in plants. Trends Plant Sci. 7: 41-48.
    • (2002) Trends Plant Sci , vol.7 , pp. 41-48
    • Seo, M.1    Koshiba, T.2
  • 42
    • 0034874729 scopus 로고    scopus 로고
    • Plant mitogen-activated protein kinase signaling cascades
    • Tena, G., Asai, T., Chiu, W.L., and Sheen, J. (2001). Plant mitogen-activated protein kinase signaling cascades. Curr. Opin. Plant Biol. 4: 392-400.
    • (2001) Curr. Opin. Plant Biol , vol.4 , pp. 392-400
    • Tena, G.1    Asai, T.2    Chiu, W.L.3    Sheen, J.4
  • 45
    • 38049138593 scopus 로고    scopus 로고
    • Functional analysis of AHK1/ATHK1 and cytokinin receptor histidine kinases in response to abscisic acid, drought, and salt stress in Arabidopsis
    • Tran, L.S., Urao, T., Qin, F., Maruyama, K., Kakimoto, T., Shinozaki, K., and Yamaguchi-Shinozaki, K. (2007). Functional analysis of AHK1/ATHK1 and cytokinin receptor histidine kinases in response to abscisic acid, drought, and salt stress in Arabidopsis. Proc. Natl. Acad. Sci. USA 104: 20623-20628.
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 20623-20628
    • Tran, L.S.1    Urao, T.2    Qin, F.3    Maruyama, K.4    Kakimoto, T.5    Shinozaki, K.6    Yamaguchi-Shinozaki, K.7
  • 47
    • 0032496395 scopus 로고    scopus 로고
    • Stress-responsive expression of genes for two-component response regulator-like proteins in Arabidopsis thaliana
    • Urao, T., Yakubov, B., Yamaguchi-Shinozaki, K., and Shinozaki, K. (1998). Stress-responsive expression of genes for two-component response regulator-like proteins in Arabidopsis thaliana. FEBS Lett. 427: 175-178.
    • (1998) FEBS Lett , vol.427 , pp. 175-178
    • Urao, T.1    Yakubov, B.2    Yamaguchi-Shinozaki, K.3    Shinozaki, K.4
  • 48
    • 0041620271 scopus 로고    scopus 로고
    • Regulatory sequence analysis tools
    • van Helden, J. (2003). Regulatory sequence analysis tools. Nucleic Acids Res. 31: 3593-3596.
    • (2003) Nucleic Acids Res , vol.31 , pp. 3593-3596
    • van Helden, J.1
  • 49
    • 0033559169 scopus 로고    scopus 로고
    • Isolation of total RNA from Arabidopsis thaliana seeds
    • Vicient, C.M., and Delseny, M. (1999). Isolation of total RNA from Arabidopsis thaliana seeds. Anal. Biochem. 268: 412-413.
    • (1999) Anal. Biochem , vol.268 , pp. 412-413
    • Vicient, C.M.1    Delseny, M.2
  • 50
    • 0027145206 scopus 로고
    • Embryogenesis in higher plants: An overview
    • West, M., and Harada, J.J. (1993). Embryogenesis in higher plants: An overview. Plant Cell 5: 1361-1369.
    • (1993) Plant Cell , vol.5 , pp. 1361-1369
    • West, M.1    Harada, J.J.2
  • 51
    • 0028370581 scopus 로고
    • A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress
    • Yamaguchi-Shinozaki, K., and Shinozaki, K. (1994). A novel cis-acting element in an Arabidopsis gene is involved in responsiveness to drought, low-temperature, or high-salt stress. Plant Cell 6: 251-264.
    • (1994) Plant Cell , vol.6 , pp. 251-264
    • Yamaguchi-Shinozaki, K.1    Shinozaki, K.2
  • 52
    • 13744261322 scopus 로고    scopus 로고
    • Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters
    • Yamaguchi-Shinozaki, K., and Shinozaki, K. (2005). Organization of cis-acting regulatory elements in osmotic- and cold-stress-responsive promoters. Trends Plant Sci. 10: 88-94.
    • (2005) Trends Plant Sci , vol.10 , pp. 88-94
    • Yamaguchi-Shinozaki, K.1    Shinozaki, K.2
  • 53
    • 33745944196 scopus 로고    scopus 로고
    • Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses
    • Yamaguchi-Shinozaki, K., and Shinozaki, K. (2006). Transcriptional regulatory networks in cellular responses and tolerance to dehydration and cold stresses. Annu. Rev. Plant Biol. 57: 781-803.
    • (2006) Annu. Rev. Plant Biol , vol.57 , pp. 781-803
    • Yamaguchi-Shinozaki, K.1    Shinozaki, K.2
  • 54
    • 27644482283 scopus 로고    scopus 로고
    • Comprehensive algorithm for quantitative real-time polymerase chain reaction
    • Zhao, S., and Fernald, R.D. (2005). Comprehensive algorithm for quantitative real-time polymerase chain reaction. J. Comput. Biol. 12: 1047-1064.
    • (2005) J. Comput. Biol , vol.12 , pp. 1047-1064
    • Zhao, S.1    Fernald, R.D.2
  • 55
    • 0036999615 scopus 로고    scopus 로고
    • Salt and drought stress signal transduction in plants
    • Zhu, J.K. (2002). Salt and drought stress signal transduction in plants. Annu. Rev. Plant Biol. 53: 247-273.
    • (2002) Annu. Rev. Plant Biol , vol.53 , pp. 247-273
    • Zhu, J.K.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.