메뉴 건너뛰기




Volumn 73, Issue 2, 2008, Pages 382-394

Speciation and demographic history of the Cortez bonefish, Albula sp. a (Albuliformes: Albulidae), in the Gulf of California inferred from mitochondrial DNA

Author keywords

Cryptic species; Cytochrome b; Marine fish; Palaeoclimate

Indexed keywords

ALBULA; ALBULA ESUNCULA; ALBULA VULPES; ALBULIDAE; ALBULIFORMES;

EID: 48349115524     PISSN: 00221112     EISSN: 10958649     Source Type: Journal    
DOI: 10.1111/j.1095-8649.2008.01892.x     Document Type: Article
Times cited : (11)

References (35)
  • 1
    • 2442436836 scopus 로고    scopus 로고
    • Molecular phylogenetics and biogeography of transisthmian and amphi-Atlantic needlefishes (Belonidae: Strongylura and Tylosurus): Perspectives on New World marine speciation
    • Banford, H. M., Bermingham, E. Collette, B. B. (2004). Molecular phylogenetics and biogeography of transisthmian and amphi-Atlantic needlefishes (Belonidae: Strongylura and Tylosurus): perspectives on New World marine speciation. Molecular Phylogenetics and Evolution 31, 833 851.
    • (2004) Molecular Phylogenetics and Evolution , vol.31 , pp. 833-851
    • Banford, H.M.1    Bermingham, E.2    Collette, B.B.3
  • 2
    • 0002365848 scopus 로고    scopus 로고
    • Fish biogeography and molecular clocks: Perspectives from the Panamanian Isthmus
    • In. Kocher, T. D. Stepien, C. A., eds. pp. San Diego, CA: Academic Press.
    • Bermingham, E., McCafferty, S. S. Martin, A. P. (1997). Fish biogeography and molecular clocks: perspectives from the Panamanian Isthmus. In Molecular Systematics of Fishes (Kocher, T. D. Stepien, C. A., eds pp. 113 128. San Diego, CA : Academic Press.
    • (1997) Molecular Systematics of Fishes , pp. 113-128
    • Bermingham, E.1    McCafferty, S.S.2    Martin, A.P.3
  • 3
    • 0043198548 scopus 로고    scopus 로고
    • Vicariance and dispersal across Baja California in disjunct marine fish populations
    • Bernardi, G., Findley, L. Rocha-Olivares, A. (2003). Vicariance and dispersal across Baja California in disjunct marine fish populations. Evolution 57, 1599 1609.
    • (2003) Evolution , vol.57 , pp. 1599-1609
    • Bernardi, G.1    Findley, L.2    Rocha-Olivares, A.3
  • 6
    • 0035005781 scopus 로고    scopus 로고
    • The evolutionary enigma of bonefishes (Albula spp.): Cryptic species and ancient separations in a globally distributed shorefish
    • Colborn, J., Crabtree, R. E., Shaklee, J. B., Pfeiler, E. Bowen, B. W. (2001). The evolutionary enigma of bonefishes (Albula spp.): cryptic species and ancient separations in a globally distributed shorefish. Evolution 55, 807 820.
    • (2001) Evolution , vol.55 , pp. 807-820
    • Colborn, J.1    Crabtree, R.E.2    Shaklee, J.B.3    Pfeiler, E.4    Bowen, B.W.5
  • 7
    • 17744381574 scopus 로고    scopus 로고
    • Bayesian coalescent inference of past population dynamics from molecular sequences
    • Drummond, A. J., Rambaut, A., Shapiro, B. Pybus, O. G. (2005). Bayesian coalescent inference of past population dynamics from molecular sequences. Molecular Biology and Evolution 22, 1185 1192.
    • (2005) Molecular Biology and Evolution , vol.22 , pp. 1185-1192
    • Drummond, A.J.1    Rambaut, A.2    Shapiro, B.3    Pybus, O.G.4
  • 8
    • 0026681074 scopus 로고
    • Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial DNA restriction data
    • Excoffier, L., Smouse, P. E. Quattro, J. M. (1992). Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131, 479 491.
    • (1992) Genetics , vol.131 , pp. 479-491
    • Excoffier, L.1    Smouse, P.E.2    Quattro, J.M.3
  • 9
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin ver. 3.0: An integrated software package for population genetics data analysis
    • Excoffier, L., Laval, G. Schneider, S. (2005). Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1, 47 50.
    • (2005) Evolutionary Bioinformatics Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 10
    • 0030821992 scopus 로고    scopus 로고
    • Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
    • Fu, Y.-X. (1997). Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147, 915 925.
    • (1997) Genetics , vol.147 , pp. 915-925
    • Fu, Y.-X.1
  • 11
    • 0023124641 scopus 로고
    • Chronology of fluctuating sea levels since the Triassic
    • Haq, B. U., Hardenbol, J. Vail, P. R. (1987). Chronology of fluctuating sea levels since the Triassic. Science 235, 1156 1167.
    • (1987) Science , vol.235 , pp. 1156-1167
    • Haq, B.U.1    Hardenbol, J.2    Vail, P.R.3
  • 12
    • 0028484009 scopus 로고
    • Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution
    • Harpending, H. (1994). Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution. Human Biology 66, 591 600.
    • (1994) Human Biology , vol.66 , pp. 591-600
    • Harpending, H.1
  • 13
    • 34249003089 scopus 로고    scopus 로고
    • Geographical subdivision, demographic history and gene flow in two sympatric species of intertidal snails, Nerita scabricosta and Nerita funiculata, from the tropical eastern Pacific
    • Hurtado, L. A., Frey, M., Gaube, P., Pfeiler, E. Markow, T. A. (2007). Geographical subdivision, demographic history and gene flow in two sympatric species of intertidal snails, Nerita scabricosta and Nerita funiculata, from the tropical eastern Pacific. Marine Biology 151, 1863 1873.
    • (2007) Marine Biology , vol.151 , pp. 1863-1873
    • Hurtado, L.A.1    Frey, M.2    Gaube, P.3    Pfeiler, E.4    Markow, T.A.5
  • 14
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16, 111 120.
    • (1980) Journal of Molecular Evolution , vol.16 , pp. 111-120
    • Kimura, M.1
  • 15
    • 0031835126 scopus 로고    scopus 로고
    • Maximum likelihood estimation of population growth rates based on the coalescent
    • Kuhner, M. K., Yamato, J. Felsenstein, J. (1998). Maximum likelihood estimation of population growth rates based on the coalescent. Genetics 149, 429 434.
    • (1998) Genetics , vol.149 , pp. 429-434
    • Kuhner, M.K.1    Yamato, J.2    Felsenstein, J.3
  • 16
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K. Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5, 150 163.
    • (2004) Briefings in Bioinformatics , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 17
    • 0036854283 scopus 로고    scopus 로고
    • Fossil calibration of molecular clocks and the divergence times of geminate species pairs separated by the Isthmus of Panama
    • Marko, P. B. (2002). Fossil calibration of molecular clocks and the divergence times of geminate species pairs separated by the Isthmus of Panama. Molecular Biology and Evolution 19, 2005 2021.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 2005-2021
    • Marko, P.B.1
  • 18
    • 0030735168 scopus 로고    scopus 로고
    • Speciation in the open ocean
    • Miya, M. Nishida, M. (1997). Speciation in the open ocean. Nature 389, 803 804.
    • (1997) Nature , vol.389 , pp. 803-804
    • Miya, M.1    Nishida, M.2
  • 19
    • 0037281324 scopus 로고    scopus 로고
    • Marine incursion synchronous with plate-boundary localization in the Gulf of California
    • Oskin, M. Stock, J. (2003). Marine incursion synchronous with plate-boundary localization in the Gulf of California. Geology 31, 23 26.
    • (2003) Geology , vol.31 , pp. 23-26
    • Oskin, M.1    Stock, J.2
  • 20
    • 0024191868 scopus 로고
    • Premetamorphic bonefish (Albula sp.) leptocephali from the Gulf of California with comments on life history
    • Pfeiler, E., Mendoza, M. A. Manrique, F. A. (1988). Premetamorphic bonefish (Albula sp.) leptocephali from the Gulf of California with comments on life history. Environmental Biology of Fishes 21, 241 249.
    • (1988) Environmental Biology of Fishes , vol.21 , pp. 241-249
    • Pfeiler, E.1    Mendoza, M.A.2    Manrique, F.A.3
  • 21
    • 0033845111 scopus 로고    scopus 로고
    • Growth rate, age and size of bonefish from the Gulf of California
    • doi: 10.1006/jfbi.1999.1160
    • Pfeiler, E., Padrón, D. Crabtree, R. E. (2000). Growth rate, age and size of bonefish from the Gulf of California. Journal of Fish Biology 56, 448 453. doi: 10.1006/jfbi.1999.1160
    • (2000) Journal of Fish Biology , vol.56 , pp. 448-453
    • Pfeiler, E.1    Padrón, D.2    Crabtree, R.E.3
  • 23
    • 33845943150 scopus 로고    scopus 로고
    • Phylogenetic relationships of the Shafted Bonefish Albula nemoptera (Albuliformes: Albulidae) from the eastern Pacific based on cytochrome b sequence analyses
    • Pfeiler, E., Bitler, B. G. Ulloa, R. (2006). Phylogenetic relationships of the Shafted Bonefish Albula nemoptera (Albuliformes: Albulidae) from the eastern Pacific based on cytochrome b sequence analyses. Copeia 2006, 778 784.
    • (2006) Copeia , vol.2006 , pp. 778-784
    • Pfeiler, E.1    Bitler, B.G.2    Ulloa, R.3
  • 24
    • 58149382303 scopus 로고    scopus 로고
    • Molecular identification of the bonefish Albula esuncula (Albuliformes: Albulidae) from the tropical eastern Pacific, with comments on distribution and morphology
    • in press).
    • Pfeiler, E., Bitler, B. G., Ulloa, R., van der Heiden, A. M. Hastings, P. A. (in press). Molecular identification of the bonefish Albula esuncula (Albuliformes: Albulidae) from the tropical eastern Pacific, with comments on distribution and morphology. Copeia.
    • Copeia.
    • Pfeiler, E.1    Bitler, B.G.2    Ulloa, R.3    Van Der Heiden, A.M.4    Hastings, P.A.5
  • 25
    • 0031773680 scopus 로고    scopus 로고
    • Modeltest: Testing the model of DNA substitution
    • Posada, D. Crandall, K. A. (1998). Modeltest: testing the model of DNA substitution. Bioinformatics 14, 817 818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 26
    • 0036897674 scopus 로고    scopus 로고
    • Statistical properties of new neutrality tests against population growth
    • Ramos-Onsins, S. E. Rozas, J. (2002). Statistical properties of new neutrality tests against population growth. Molecular Biology and Evolution 19, 2092 2100.
    • (2002) Molecular Biology and Evolution , vol.19 , pp. 2092-2100
    • Ramos-Onsins, S.E.1    Rozas, J.2
  • 28
    • 0026548159 scopus 로고
    • Population growth makes waves in the distribution of pairwise genetic differences
    • Rogers, A. R. Harpending, H. (1992). Population growth makes waves in the distribution of pairwise genetic differences. Molecular Biology and Evolution 9, 552 569.
    • (1992) Molecular Biology and Evolution , vol.9 , pp. 552-569
    • Rogers, A.R.1    Harpending, H.2
  • 29
    • 0347513220 scopus 로고    scopus 로고
    • DnaSP, DNA polymorphism analyses by the coalescent and other methods
    • Rozas, J., Sánchez-DelBarrio, J. C., Messeguer, X. Rozas, R. (2003). DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19, 2496 2497.
    • (2003) Bioinformatics , vol.19 , pp. 2496-2497
    • Rozas, J.1    Sánchez-Delbarrio, J.C.2    Messeguer, X.3    Rozas, R.4
  • 30
    • 0001054762 scopus 로고
    • Biochemical and morphological evolution of Hawaiian bonefishes (Albula)
    • Shaklee, J. B. Tamaru, C. S. (1981). Biochemical and morphological evolution of Hawaiian bonefishes (Albula). Systematic Zoology 30, 125 146.
    • (1981) Systematic Zoology , vol.30 , pp. 125-146
    • Shaklee, J.B.1    Tamaru, C.S.2
  • 31
    • 0024313579 scopus 로고
    • Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
    • Tajima, F. (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123, 585 595.
    • (1989) Genetics , vol.123 , pp. 585-595
    • Tajima, F.1
  • 32
    • 0027453388 scopus 로고
    • Simple methods for testing molecular clock hypothesis
    • Tajima, F. (1993). Simple methods for testing molecular clock hypothesis. Genetics 135, 599 607.
    • (1993) Genetics , vol.135 , pp. 599-607
    • Tajima, F.1
  • 33
    • 0027157960 scopus 로고
    • Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
    • Tamura, K. Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Molecular Biology and Evolution 10, 512 526.
    • (1993) Molecular Biology and Evolution , vol.10 , pp. 512-526
    • Tamura, K.1    Nei, M.2
  • 34
    • 0031574072 scopus 로고    scopus 로고
    • The ClustalX windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. Higgins, D. G. (1997). The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24, 4876 4882.
    • (1997) Nucleic Acids Research , vol.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 35
    • 0036005519 scopus 로고    scopus 로고
    • Delimiting species using DNA and morphological variation and discordant species limits in spiny lizards (Sceloporus)
    • Wiens, J. J. Penkrot, T. A. (2002). Delimiting species using DNA and morphological variation and discordant species limits in spiny lizards (Sceloporus). Systematic Biology 51, 69 91.
    • (2002) Systematic Biology , vol.51 , pp. 69-91
    • Wiens, J.J.1    Penkrot, T.A.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.