Quantum dot-fluorescent protein pairs as novel fluorescence resonance energy transfer probes

Nano Letters

Volumn 8, Issue 5, 2008, Pages 1439-1445

  Dennis, Allison M ^a   Bao, Gang ^a  

^a Emory University   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING STRENGTHS; BIO-MEDICAL APPLICATIONS; CORE SHELLS; DONOR ACCEPTORS; FLUORESCENCE RESONANCE ENERGY TRANSFER PROBES; FLUORESCENCE RESONANCE ENERGY TRANSFERS; FLUORESCENT PROTEINS; POLYHISTIDINE; QUANTUM DOTS;

ENERGY TRANSFER; FLUORESCENCE; PROBES; QUENCHING; RESONANCE;

SEMICONDUCTOR QUANTUM DOTS;

HISTIDINE; POLYHISTIDINE; QUANTUM DOT;

ARTICLE; CHEMISTRY; CONFORMATION; CRYSTALLIZATION; FLUORESCENCE RESONANCE ENERGY TRANSFER; GENETIC PROCEDURES; MATERIALS TESTING; METHODOLOGY; NANOTECHNOLOGY; PARTICLE SIZE;

CRYSTALLIZATION; FLUORESCENCE RESONANCE ENERGY TRANSFER; HISTIDINE; MATERIALS TESTING; MOLECULAR CONFORMATION; MOLECULAR PROBE TECHNIQUES; NANOTECHNOLOGY; PARTICLE SIZE; QUANTUM DOTS;

EID: 46749153485     PISSN: 15306984     EISSN: None     Source Type: Journal    
DOI: 10.1021/nl080358+     Document Type: Article

References (32)

1. Chan, W. C.; Nie, S. Quantum dot bioconjugates for ultrasensitive nonisotopic detection. Science 1998, 281 (5385), 2016-2018.
2. Bruchez, M.; Moronne, M.; Gin, P.; Weiss, S.; Alivisatos, A. P. Semiconductor nanocrystals as fluorescent biological labels. Science 1998, 281 (5385), 2013-2016.
3. Voura, E. B.; Jaiswal, J. K.; Mattoussi, H.; Simon, S. M. Tracking metastatic tumor cell extravasation with quantum dot nanocrystals and fluorescence emission-scanning microscopy. Nat. Med. 2004, 10 (9), 993-998.
4. Garon, E. B.; Marcu, L.; Luong, Q.; Tcherniantchouk, O.; Crooks, G. M.; Koeffler, H. P. Quantum dot labeling and tracking of human leukemic, bone marrow and cord blood cells. Leuk. Res. 2007, 31 (5), 643-651.
5. Hama, Y.; Koyama, Y.; Urano, Y.; Choyke, P. L.; Kobayashi, H. Simultaneous two-color spectral fluorescence lymphangiography with near infrared quantum dots to map two lymphatic flows from the breast and the upper extremity. Breast Cancer Res. Treat. 2007, 103 (1), 23-28.
6. Gao, X.; Cui, Y.; Levenson, R. M.; Chung, L. W.; Nie, S. In vivo cancer targeting and imaging with semiconductor quantum dots. Nat. Biotechnol. 2004, 22 (8), 969-976.
7. Chattopadhyay, P. K.; Price, D. A.; Harper, T. F.; Betts, M. R.; Yu, J.; Gostick, E.; Perfetto, S. P.; Goepfert, P.; Koup, R. A.; De Rosa, S. C.; Bruchez, M. P.; Roederer, M. Quantum dot semiconductor nanocrystals for immunophenotyping by polychromatic flow cytometry. Nat. Med. 2006, 12 (8), 972-977.
8. Howarth, M.; Takao, K.; Hayashi, Y.; Ting, A. Y. Targeting quantum dots to surface proteins in living cells with biotin ligase. Proc. Natl. Acad. Sci. U.S.A. 2005, 102 (21), 7583-7588.
9. Bonasio, R.; Carman, C. V.; Kim, E.; Sage, P. T.; Love, K. R.; Mempel, T. R.; Springer, T. A.; von Andrian, U. H. Specific and covalent labeling of a membrane protein with organic fluorochromes and quantum dots. Proc. Natl. Acad Sci. U.S.A. 2007, 104 (37), 14753-14758.
10. Chang, E.; Miller, J. S.; Sun, J.; Yu, W. W.; Colvin, V. L.; Drezek, R.; West, J. L. Protease-activated quantum dot probes. Biochem. Biophys. Res. Commun. 2005, 334 (4), 1317-1321.
11. Xu, C.; Xing, B.; Rao, J. A self-assembled quantum dot probe for detecting beta-lactamase activity. Biochem. Biophys. Res. Commun. 2006, 344 (3), 931-935.
12. Clapp, A. R.; Medintz, I. L.; Uyeda, H. T.; Fisher, B. R.; Goldman, E. R.; Bawendi, M. G.; Mattoussi, H. Quantum Dot-Based Multiplexed Fluorescence Resonance Energy Transfer. J. Am. Chem. Soc. 2005, 127(51), 18212-18221.
13. Yao, H.; Zhang, Y.; Xiao, F.; Xia, Z.; Rao, J. Quantum dot/ bioluminescence resonance energy transfer based highly sensitive detection of proteases. Angew. Chem., Int. Ed. 2007, 46 (23), 4346-4349.
14. Medintz, I. L.; Clapp, A. R.; Brunel, F. M.; Tiefenbrunn, T.; Uyeda, H. T.; Chang, E. L.; Deschamps, J. R.; Dawson, P. E.; Mattoussi, H. Proteolytic activity monitored by fluorescence resonance energy transfer through quantum-dot-peptide conjugates. Nat. Mater. 2006, 5 (7), 581-589.
15. Sapsford, K. E.; Pons, T.; Medintz, I. L.; Mattoussi, H. Biosensing with luminescent semiconductor quantum dots. Sensors 2006, 6 (8), 925-953.
16. Qu, L.; Peng, X. Control of photoluminescence properties of CdSe nanocrystals in growth. J. Am. Chem. Soc. 2002, 124 (9), 2049-2055.
17. Striolo, A.; Ward, J.; Prausnitz, J. M.; Parak, W. J.; Zanchet, D.; Gerion, D.; Milliron, D.; Alivisatos, A. P. Molecular weight, osmotic second virial coefficient, and extinction coefficient of colloidal CdSe nanocrystals. J. Phys. Chem. B 2002, 106 (21), 5500-5505.
18. Medintz, I. L.; Clapp, A. R.; Mattoussi, H.; Goldman, E. R.; Fisher, B.; Mauro, J. M. Self-assembled nanoscale biosensors based on quantum dot FRET donors. Nat. Mater. 2003, 2 (9), 630-638.
19. Chan, W. C. W.; Maxwell, D. J.; Gao, X. H.; Bailey, R. E.; Han, M. Y.; Nie, S. M. Luminescent quantum dots for multiplexed biological detection and imaging. Curr. Opin. Biotechnol. 2002, 13(1), 40-46.
20. Lakowicz, J. R., Principles of fluorescence spectroscopy, 3rd ed.; Springer: New York, 2006.
21. Clapp, A. R.; Medintz, I. L.; Mattoussi, H. Forster resonance energy transfer investigations using quantum-dot fluorophores. ChemPhysChem 2006, 7(1), 47-57.
22. Sapsford, K. E.; Pons, T.; Medintz, I. L.; Higashiya, S.; Brunel, F. M.; Dawson, P. E.; Mattoussi, H. Kinetics of Metal-Affinity Driven Self-Assembly between Proteins or Peptides and CdSe-ZnS Quantum Dots. J. Phys. Chem. C. 2007, 111 (31), 11528-11538.
23. Susumu, K.; Uyeda, H. T.; Medintz, I. L.; Pons, T.; Delehanty, J. B.; Mattoussi, H. Enhancing the stability and biological functionalities of quantum dots via compact multifunctional ligands.J. Am. Chem. Soc. 2007, 129 (45), 13987-13996.
24. Shaner, N. C.; Campbell, R. E.; Steinbach, P. A.; Giepmans, B. N.; Palmer, A. E.; Tsien, R. Y. Improved monomeric red, orange and yellow fluorescent proteins derived from Discosoma sp. red fluorescent protein. Nat. Biotechnol. 2004, 22 (12), 1567-1572.
25. Shaner, N. C.; Steinbach, P. A.; Tsien, R. Y. A guide to choosing fluorescent proteins. Nat. Methods 2005, 2 (12), 905-909.
26. Moreland, J. L.; Gramada, A.; Buzko, O. V.; Zhang, Q.; Bourne, P. E. The Molecular Biology Toolkit (MBT): a modular platform for developing molecular visualization applications. BMC Bioinf. 2005, 6, 21.
27. Hink, M. A.; Visser, N. V.; Borst, J. W.; van Hoek, A.; Visser, A. J. W. G. Practical use of corrected fluorescence excitation and emission spectra of fluorescent proteins in Forster resonance energy transfer (FRET) studies. J. Fluoresc. 2003, 13 (2), 185-188.
28. Guignet, E. G.; Hovius, R.; Vogel, H. Reversible site-selective labeling of membrane proteins in live cells. Nat. Biotechnol. 2004, 22 (4), 440-444.
29. Harlow, E.; Lane, D., Antibodies: a laboratory manual; Cold Spring Harbor Laboratory: Cold Spring Harbor, NY, 1988.
30. Hoffmann, A.; Roeder, R. G. Purification of his-tagged proteins in non-denaturing conditions suggests a convenient method for protein interaction studies. Nucleic Acids Res. 1991, 19 (22), 6337-6338.
31. Pons, T.; Medintz, I. L.; Wang, X.; English, D. S.; Mattoussi, H. Solution-phase single quantum dot fluorescence resonance energy transfer. J. Am. Chem. Soc. 2006, 128 (47), 15324-15331.
32. Medintz, I. L.; Berti, L.; Pons, T.; Grimes, A. F.; English, D. S.; Alessandrini, A.; Facci, P.; Mattoussi, H. A reactive peptidic linker for self-assembling hybrid quantum dot-DNA bioconjugates. Nano Lett. 2007, 7 (6), 1741-1748.