-
1
-
-
24344438293
-
Structural and dynamical features contributing to thermostability in alpha-amylases
-
Fitter J. Structural and dynamical features contributing to thermostability in alpha-amylases. Cell Mol Life Sci 2005;62:1925-1937.
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 1925-1937
-
-
Fitter, J.1
-
3
-
-
0034717156
-
Stability and stabilization of globular proteins in solution
-
Jaenicke R. Stability and stabilization of globular proteins in solution. J Biotechnol 2000;79:193-203.
-
(2000)
J Biotechnol
, vol.79
, pp. 193-203
-
-
Jaenicke, R.1
-
4
-
-
34547747311
-
Hyperthermophilic enzymes - stability, activity and implementation strategies for high temperature applications
-
Unsworth LD, van der Oost J, Koutsopoulos S. Hyperthermophilic enzymes - stability, activity and implementation strategies for high temperature applications. FEBS J 2007;274:4044-4056.
-
(2007)
FEBS J
, vol.274
, pp. 4044-4056
-
-
Unsworth, L.D.1
van der Oost, J.2
Koutsopoulos, S.3
-
5
-
-
46449103307
-
Differences in amino acids composition and coupling patterns between mesophilic and thermophilic proteins
-
Published online ahead of print: August 21
-
Zhou XX, Wang YB, Pan YJ, Li WF. Differences in amino acids composition and coupling patterns between mesophilic and thermophilic proteins. Amino Acids (Published online ahead of print: August 21, 2007).
-
(2007)
Amino Acids
-
-
Zhou, X.X.1
Wang, Y.B.2
Pan, Y.J.3
Li, W.F.4
-
6
-
-
21744452155
-
Kinetic stabilization of an oligomeric protein under physiological conditions demonstrated by a lack of subunit exchange: Implications for transthyretin amyloidosis
-
Wiseman RL, Green NS, Kelly JW. Kinetic stabilization of an oligomeric protein under physiological conditions demonstrated by a lack of subunit exchange: implications for transthyretin amyloidosis. Biochemistry 2005;44:9265-9274.
-
(2005)
Biochemistry
, vol.44
, pp. 9265-9274
-
-
Wiseman, R.L.1
Green, N.S.2
Kelly, J.W.3
-
7
-
-
0037162419
-
Conformational stability of legume lectins reflect their different modes of quaternary association: Solvent denaturation studies on concanavalin A and winged bean acidic agglutinin
-
Mitra N, Srinivas VR, Ramya TN, Ahmad N, Reddy GB, Surolia A. Conformational stability of legume lectins reflect their different modes of quaternary association: solvent denaturation studies on concanavalin A and winged bean acidic agglutinin. Biochemistry 2002;41:9256-9263.
-
(2002)
Biochemistry
, vol.41
, pp. 9256-9263
-
-
Mitra, N.1
Srinivas, V.R.2
Ramya, T.N.3
Ahmad, N.4
Reddy, G.B.5
Surolia, A.6
-
8
-
-
0242636350
-
Stabilization of a tetrameric malate dehydrogenase by introduction of a disulfide bridge at the dimer-dimer interface
-
Bjork A, Dalhus B, Mantzilas D, Eijsink VG, Sirevag R. Stabilization of a tetrameric malate dehydrogenase by introduction of a disulfide bridge at the dimer-dimer interface. J Mol Biol 2003;334:811-821.
-
(2003)
J Mol Biol
, vol.334
, pp. 811-821
-
-
Bjork, A.1
Dalhus, B.2
Mantzilas, D.3
Eijsink, V.G.4
Sirevag, R.5
-
9
-
-
33744500983
-
Intersubunit disulfide interactions play a critical role in maintaining the thermostability of glucose-6-phosphate dehydrogenase from the hyperthermophilic bacterium Aquifex aeolicus
-
Nakka M, Iyer RB, Bachas LG. Intersubunit disulfide interactions play a critical role in maintaining the thermostability of glucose-6-phosphate dehydrogenase from the hyperthermophilic bacterium Aquifex aeolicus. Protein J 2006;25:17-21.
-
(2006)
Protein J
, vol.25
, pp. 17-21
-
-
Nakka, M.1
Iyer, R.B.2
Bachas, L.G.3
-
10
-
-
0034657260
-
Role of the tertiary and quaternary structures in the stability of dimeric copper, zinc superoxide dismutases
-
Stroppolo ME, Malvezzi-Campeggi F, Mei G, Rosato N, Desideri A. Role of the tertiary and quaternary structures in the stability of dimeric copper, zinc superoxide dismutases. Arch Biochem Biophys 2000;377:215-218.
-
(2000)
Arch Biochem Biophys
, vol.377
, pp. 215-218
-
-
Stroppolo, M.E.1
Malvezzi-Campeggi, F.2
Mei, G.3
Rosato, N.4
Desideri, A.5
-
11
-
-
0036301867
-
Crystal structure of the alcohol dehydrogenase from the hyperthermophilic archaeon Sulfolobus solfataricus at 1.85 A resolution
-
Esposito L, Sica F, Raia CA, Giordano A, Rossi M, Mazzarella L, Zagari A. Crystal structure of the alcohol dehydrogenase from the hyperthermophilic archaeon Sulfolobus solfataricus at 1.85 A resolution. J Mol Biol 2002;318:463-477.
-
(2002)
J Mol Biol
, vol.318
, pp. 463-477
-
-
Esposito, L.1
Sica, F.2
Raia, C.A.3
Giordano, A.4
Rossi, M.5
Mazzarella, L.6
Zagari, A.7
-
12
-
-
0043123405
-
The structure of an alcohol dehydrogenase from the hyperthermophilic archaeon Aeropyrum pernix
-
Guy JE, Isupov MN, Littlechild JA. The structure of an alcohol dehydrogenase from the hyperthermophilic archaeon Aeropyrum pernix. J Mol Biol 2003;331:1041-1051.
-
(2003)
J Mol Biol
, vol.331
, pp. 1041-1051
-
-
Guy, J.E.1
Isupov, M.N.2
Littlechild, J.A.3
-
13
-
-
2442712592
-
The ternary complex of Pseudomonas aeruginosa alcohol dehydrogenase with NADH and ethylene glycol
-
Levin I, Meiri G, Peretz M, Burstein Y, Frolow F. The ternary complex of Pseudomonas aeruginosa alcohol dehydrogenase with NADH and ethylene glycol. Protein Sci 2004;13:1547-1556.
-
(2004)
Protein Sci
, vol.13
, pp. 1547-1556
-
-
Levin, I.1
Meiri, G.2
Peretz, M.3
Burstein, Y.4
Frolow, F.5
-
14
-
-
0036838706
-
Structural basis for the enhanced thermal stability of alcohol dehydrogenase mutants from the mesophilic bacterium Clostridium beijerinckii: Contribution of salt bridging
-
Bogin O, Levin I, Hacham Y, Tel-Or S, Peretz M, Frolow F, Burstein Y. Structural basis for the enhanced thermal stability of alcohol dehydrogenase mutants from the mesophilic bacterium Clostridium beijerinckii: contribution of salt bridging. Protein Sci 2002;11:2561-2574.
-
(2002)
Protein Sci
, vol.11
, pp. 2561-2574
-
-
Bogin, O.1
Levin, I.2
Hacham, Y.3
Tel-Or, S.4
Peretz, M.5
Frolow, F.6
Burstein, Y.7
-
15
-
-
0026447531
-
Cloning and expression of an NADP(+)-dependent alcohol dehydrogenase gene of Entamoeba histolytica
-
Kumar A, Shen PS, Descoteaux S, Pohl J, Bailey G, Samuelson J. Cloning and expression of an NADP(+)-dependent alcohol dehydrogenase gene of Entamoeba histolytica. Proc Natl Acad Sci USA 1992;89:10188-10192.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 10188-10192
-
-
Kumar, A.1
Shen, P.S.2
Descoteaux, S.3
Pohl, J.4
Bailey, G.5
Samuelson, J.6
-
16
-
-
0031208319
-
Molecular cloning, nucleotide sequencing, and expression of genes encoding alcohol dehydrogenases from the thermophile Thermoanaerobacter brockii and the mesopbile Clostridium beijerinckii
-
Peretz M, Bogin O, Tel-Or S, Cohen A, Li G, Chen J-S, Burstein Y. Molecular cloning, nucleotide sequencing, and expression of genes encoding alcohol dehydrogenases from the thermophile Thermoanaerobacter brockii and the mesopbile Clostridium beijerinckii. Anaerobe 1997;3:259-270.
-
(1997)
Anaerobe
, vol.3
, pp. 259-270
-
-
Peretz, M.1
Bogin, O.2
Tel-Or, S.3
Cohen, A.4
Li, G.5
Chen, J.-S.6
Burstein, Y.7
-
17
-
-
0036006280
-
Thermophilic alcohol dehydrogenase from the mesophile Entamoeba histolytica: Crystallization and preliminary X-ray characterization
-
Shimon LJ, Peretz M, Goihberg E, Burstein Y, Frolow F. Thermophilic alcohol dehydrogenase from the mesophile Entamoeba histolytica: crystallization and preliminary X-ray characterization. Acta Crystallogr D Biol Crystallogr 2002;58 (Part 3):546-548.
-
(2002)
Acta Crystallogr D Biol Crystallogr
, vol.58
, Issue.PART 3
, pp. 546-548
-
-
Shimon, L.J.1
Peretz, M.2
Goihberg, E.3
Burstein, Y.4
Frolow, F.5
-
18
-
-
0032989134
-
Oligomeric integrity - the structural key to thermal stability in bacterial alcohol dehydrogenases
-
Korkhin Y, Kalb AJ, Peretz M, Bogin O, Burstein Y, Frolow F. Oligomeric integrity - the structural key to thermal stability in bacterial alcohol dehydrogenases. Protein Sci 1999;8:1241-1249.
-
(1999)
Protein Sci
, vol.8
, pp. 1241-1249
-
-
Korkhin, Y.1
Kalb, A.J.2
Peretz, M.3
Bogin, O.4
Burstein, Y.5
Frolow, F.6
-
19
-
-
33646589624
-
Structure of alcohol dehydrogenase from Entamoeba histolytica
-
Shimon LJ, Goihberg E, Peretz M, Burstein Y, Frolow F. Structure of alcohol dehydrogenase from Entamoeba histolytica. Acta Crystallogr D Biol Crystallogr 2006;62 (Part 5):541-547.
-
(2006)
Acta Crystallogr D Biol Crystallogr
, vol.62
, Issue.PART 5
, pp. 541-547
-
-
Shimon, L.J.1
Goihberg, E.2
Peretz, M.3
Burstein, Y.4
Frolow, F.5
-
20
-
-
0031837178
-
Enhanced thermal stability of Clostridium beijerinckii alcohol dehydrogenase after strategic substitution of amino acid residues with prolines from the homologous thermophilic Thermoanaerobacter brockii alcohol dehydrogenase
-
Bogin O, Peretz M, Hacham Y, Korkhin Y, Frolow F, Kalb AJ, Burstein Y. Enhanced thermal stability of Clostridium beijerinckii alcohol dehydrogenase after strategic substitution of amino acid residues with prolines from the homologous thermophilic Thermoanaerobacter brockii alcohol dehydrogenase. Protein Sci 1998;7:1156-1163.
-
(1998)
Protein Sci
, vol.7
, pp. 1156-1163
-
-
Bogin, O.1
Peretz, M.2
Hacham, Y.3
Korkhin, Y.4
Frolow, F.5
Kalb, A.J.6
Burstein, Y.7
-
21
-
-
33845679397
-
A single proline substitution is critical for the thermostabilization of Clostridium beijerinckii alcohol dehydrogenase
-
Goihberg E, Dym O, Tel-Or S, Levin I, Peretz M, Burstein Y. A single proline substitution is critical for the thermostabilization of Clostridium beijerinckii alcohol dehydrogenase. Proteins 2007;66:196-204.
-
(2007)
Proteins
, vol.66
, pp. 196-204
-
-
Goihberg, E.1
Dym, O.2
Tel-Or, S.3
Levin, I.4
Peretz, M.5
Burstein, Y.6
-
22
-
-
0017184389
-
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
-
Bradford MM. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 1976;72:248-254.
-
(1976)
Anal Biochem
, vol.72
, pp. 248-254
-
-
Bradford, M.M.1
-
23
-
-
0016800090
-
A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase
-
Sanger F, Coulson AR. A rapid method for determining sequences in DNA by primed synthesis with DNA polymerase. J Mol Biol 1975;94:441-448.
-
(1975)
J Mol Biol
, vol.94
, pp. 441-448
-
-
Sanger, F.1
Coulson, A.R.2
-
24
-
-
0014949207
-
Cleavage of structural proteins during the assembly of the head of bacteriophage T4
-
Laemmli UK. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 1970;227:680-685.
-
(1970)
Nature
, vol.227
, pp. 680-685
-
-
Laemmli, U.K.1
-
25
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z, Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol A 1997;276:307-326.
-
(1997)
Methods Enzymol A
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
26
-
-
0000560808
-
MOLREP: An automated program for molecular replacement
-
Vagin A, Teplyakov A. MOLREP: an automated program for molecular replacement. J Appl Crystallogr 1997;30:1022-1025.
-
(1997)
J Appl Crystallogr
, vol.30
, pp. 1022-1025
-
-
Vagin, A.1
Teplyakov, A.2
-
28
-
-
13244281317
-
Coot: Model-building tools for molecular graphics
-
Emsley P, Cowtan K. Coot: model-building tools for molecular graphics. Acta Crystallogr D Biol Crystallogr 2004;60 (Part 12):2126-2132.
-
(2004)
Acta Crystallogr D Biol Crystallogr
, vol.60
, Issue.PART 12
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
29
-
-
0025398721
-
WHAT IF: A molecular modeling and drug design program. J Mol Graph
-
29
-
Vriend G. WHAT IF: a molecular modeling and drug design program. J Mol Graph 1990;8:52-56, 29.
-
(1990)
, vol.8
, pp. 52-56
-
-
Vriend, G.1
-
32
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brunger AT, Adams PD, Clore GM, DeLano WL, Gros P, Grosse-Kunstleve RW, Jiang JS, Kuszewski J, Nilges M, Pannu NS, Read RJ, Rice LM, Simonson T, Warren GL. Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr D Biol Crystallogr 1998;54:905-921.
-
(1998)
Acta Crystallogr D Biol Crystallogr
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
33
-
-
0030841587
-
Electron-density map interpretation
-
Jones TA, Kjeldgaard M. Electron-density map interpretation. Methods Enzymol B 1997;277:173-208.
-
(1997)
Methods Enzymol B
, vol.277
, pp. 173-208
-
-
Jones, T.A.1
Kjeldgaard, M.2
-
34
-
-
33846011885
-
Thermodynamic effects of proline introduction on protein stability
-
Prajapati RS, Das M, Sreeramulu S, Sirajuddin M, Srinivasan S, Krishnamurthy V, Ranjani R, Ramakrishnan C, Varadarajan R. Thermodynamic effects of proline introduction on protein stability. Proteins 2007;66:480-491.
-
(2007)
Proteins
, vol.66
, pp. 480-491
-
-
Prajapati, R.S.1
Das, M.2
Sreeramulu, S.3
Sirajuddin, M.4
Srinivasan, S.5
Krishnamurthy, V.6
Ranjani, R.7
Ramakrishnan, C.8
Varadarajan, R.9
-
35
-
-
34249933886
-
Mesophile versus thermophile: Insights into the structural mechanisms of kinetic stability
-
Kelch BA, Agard DA. Mesophile versus thermophile: insights into the structural mechanisms of kinetic stability. J Mol Biol 2007;370:784-795.
-
(2007)
J Mol Biol
, vol.370
, pp. 784-795
-
-
Kelch, B.A.1
Agard, D.A.2
|