-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0018800089
-
A rapid alkaline extraction procedure for screening recombinant plasmid DNA
-
Birnboim, H. C., and J. Doly. 1979. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7:1513-1523.
-
(1979)
Nucleic Acids Res.
, vol.7
, pp. 1513-1523
-
-
Birnboim, H.C.1
Doly, J.2
-
3
-
-
0031923751
-
Use of a Mycobacterium tuberculosis H37Rv bacterial artificial chromosome library for genome mapping, sequencing and comparative genomics
-
Brosch, R., S. V. Gordon, A. Billault, T. Garnier, K. Eiglmeier, C. Soravito, B. G. Barrell, and S. T. Cole. 1998. Use of a Mycobacterium tuberculosis H37Rv bacterial artificial chromosome library for genome mapping, sequencing and comparative genomics. Infect. Immun. 66:2221-2229.
-
(1998)
Infect. Immun.
, vol.66
, pp. 2221-2229
-
-
Brosch, R.1
Gordon, S.V.2
Billault, A.3
Garnier, T.4
Eiglmeier, K.5
Soravito, C.6
Barrell, B.G.7
Cole, S.T.8
-
4
-
-
0032797519
-
The 102-kilobase pgm locus of Yersinia pestis: Sequence analysis and comparison of selected regions among different Yersinia pestis and Yersinia pseudotubercutosis strains
-
Buchrieser, C., C. Rusniok, L. Frangeul, E. Couve, A. Billault, F. Kunst, E. Carniel, and P. Glaser. 1999. The 102-kilobase pgm locus of Yersinia pestis: sequence analysis and comparison of selected regions among different Yersinia pestis and Yersinia pseudotubercutosis strains. Infect. Immun. 67:4851-4861.
-
(1999)
Infect. Immun.
, vol.67
, pp. 4851-4861
-
-
Buchrieser, C.1
Rusniok, C.2
Frangeul, L.3
Couve, E.4
Billault, A.5
Kunst, F.6
Carniel, E.7
Glaser, P.8
-
5
-
-
0035863067
-
The black cat/white cat principle of signal integration in bacterial promoters
-
Cases, I., and V. de Lorenzo. 2001. The black cat/white cat principle of signal integration in bacterial promoters. The EMBO J. 20:1-11.
-
(2001)
The EMBO J.
, vol.20
, pp. 1-11
-
-
Cases, I.1
De Lorenzo, V.2
-
6
-
-
0030970814
-
Rapid amplification of uncharacterized transposon-tagged DNA sequences from genomic DNA
-
Chun, K. T., H. J. Edenberg, M. R. Kelley, and M. G. Goebl. 1997. Rapid amplification of uncharacterized transposon-tagged DNA sequences from genomic DNA. Yeast 13:233-240.
-
(1997)
Yeast
, vol.13
, pp. 233-240
-
-
Chun, K.T.1
Edenberg, H.J.2
Kelley, M.R.3
Goebl, M.G.4
-
7
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet, F. 1988. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16:10881-10890.
-
(1988)
Nucleic Acids Res.
, vol.16
, pp. 10881-10890
-
-
Corpet, F.1
-
8
-
-
0037031286
-
Probing the 2,4-dichlorophenoxyacetate/α-ketoglutarate dioxygenase substrate-binding site by site-directed mutagenesis and mechanism-based inactivation
-
Dunning-Hotopp, J. C., and R. P. Hausinger. 2002. Probing the 2,4-dichlorophenoxyacetate/α-ketoglutarate dioxygenase substrate-binding site by site-directed mutagenesis and mechanism-based inactivation. Biochemistry 41:9787-9794.
-
(2002)
Biochemistry
, vol.41
, pp. 9787-9794
-
-
Dunning-Hotopp, J.C.1
Hausinger, R.P.2
-
9
-
-
0345726094
-
Isolation of phenoxyherbicide-degrading Rhodoferax species from contaminated building material
-
Ehrig, A, R. H. Müller, and W. Babel. 1997. Isolation of phenoxyherbicide-degrading Rhodoferax species from contaminated building material. Acta Biotechnol. 17:351-356.
-
(1997)
Acta Biotechnol.
, vol.17
, pp. 351-356
-
-
Ehrig, A.1
Müller, R.H.2
Babel, W.3
-
10
-
-
0037161271
-
X-ray crystal structure of Escherichia coli taurine/α-ketoglutarate dioxygenase complexed to ferrous iron and substrates
-
Elkins, J. M., M. J. Ryle, I. J. Clifton, J. C. Dunning-Hotop, J. S. Lloyd, N. I. Burzlaff, J. E. Baldwin, R. P. Hausinger, and P. L. Roach. 2002. X-ray crystal structure of Escherichia coli taurine/α-ketoglutarate dioxygenase complexed to ferrous iron and substrates. Biochemistry 41:5185-5192.
-
(2002)
Biochemistry
, vol.41
, pp. 5185-5192
-
-
Elkins, J.M.1
Ryle, M.J.2
Clifton, I.J.3
Dunning-Hotop, J.C.4
Lloyd, J.S.5
Burzlaff, N.I.6
Baldwin, J.E.7
Hausinger, R.P.8
Roach, P.L.9
-
11
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing, B., and P. Green. 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8:175-185.
-
(1998)
Genome Res.
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Green, P.2
-
12
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilities
-
Ewing, B., and P. Green. 1998. Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res. 8:186-198.
-
(1998)
Genome Res.
, vol.8
, pp. 186-198
-
-
Ewing, B.1
Green, P.2
-
13
-
-
0027484167
-
Purification and characterization of 2,4-dichlorophenoxyacetate/α- ketoglutarate dioxygenase
-
Fukumori, F., and R. P. Hausinger. 1993. Purification and characterization of 2,4-dichlorophenoxyacetate/α-ketoglutarate dioxygenase. J. Biol. Chem. 268:24311-24317.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 24311-24317
-
-
Fukumori, F.1
Hausinger, R.P.2
-
14
-
-
0036848622
-
Distribution of IS91 family insertion sequences in bacterial genomes: Evolutionary implications
-
Garcillán-Barcia, M. P., and F. de la Cruz. 2002. Distribution of IS91 family insertion sequences in bacterial genomes: evolutionary implications. FEMS Microbiol. Ecol. 42:303-313.
-
(2002)
FEMS Microbiol. Ecol.
, vol.42
, pp. 303-313
-
-
Garcillán-Barcia, M.P.1
De La Cruz, F.2
-
15
-
-
0031955116
-
Consed: A graphical tool for sequence fishing
-
Gordon, D., C. Abajian, and P. Green. 1998. Consed: a graphical tool for sequence fishing. Genome Res. 8:195-202.
-
(1998)
Genome Res.
, vol.8
, pp. 195-202
-
-
Gordon, D.1
Abajian, C.2
Green, P.3
-
16
-
-
0026760856
-
Microbial breakdown of halogenated aromatic pesticides and related compounds
-
Häggblom, M. M. 1992. Microbial breakdown of halogenated aromatic pesticides and related compounds. FEMS Microb. Rev. 103:29-72.
-
(1992)
FEMS Microb. Rev.
, vol.103
, pp. 29-72
-
-
Häggblom, M.M.1
-
17
-
-
0035202296
-
Development and application of PCR primers for the detection of the tfd genes in Delftia acidovorans P4a involved in the degradation of 2,4-D
-
Hoffmann, D., S. Kleinsteuber, R. H. Müller, and W. Babel. 2001. Development and application of PCR primers for the detection of the tfd genes in Delftia acidovorans P4a involved in the degradation of 2,4-D. Acta Biotechnol. 21:321-331.
-
(2001)
Acta Biotechnol.
, vol.21
, pp. 321-331
-
-
Hoffmann, D.1
Kleinsteuber, S.2
Müller, R.H.3
Babel, W.4
-
19
-
-
0030834320
-
Distribution of the tfdA gene in soil bacteria that do not degrade 2,4-dichlorophenoxyacetic acid (2,4-D)
-
Hogan, D. A., D. H. Buckley, C. H. Nakatsu, T. M. Schmidt, and R. P. Hausinger. 1997. Distribution of the tfdA gene in soil bacteria that do not degrade 2,4-dichlorophenoxyacetic acid (2,4-D). Microb. Ecol. 34:90-96.
-
(1997)
Microb. Ecol.
, vol.34
, pp. 90-96
-
-
Hogan, D.A.1
Buckley, D.H.2
Nakatsu, C.H.3
Schmidt, T.M.4
Hausinger, R.P.5
-
20
-
-
0034724670
-
Site-directed mutagenesis of 2,4-dichlorophenoxyacetic acid/α-ketoglutarate dioxygenase
-
Hogan, D. A., S. R. Smith, E. A. Saari, J. McCracken, and R. P. Hausinger. 2000. Site-directed mutagenesis of 2,4-dichlorophenoxyacetic acid/α-ketoglutarate dioxygenase. J. Biol. Chem. 275:12400-12409.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 12400-12409
-
-
Hogan, D.A.1
Smith, S.R.2
Saari, E.A.3
McCracken, J.4
Hausinger, R.P.5
-
21
-
-
0025372447
-
Isolation and characterization of a 2-(2,4-dichlorophenoxy)propionic acid-degrading soil bacterium
-
Horvath, M., G. Dietzelmüller, M. Loidl, and F. Streichsbier. 1990. Isolation and characterization of a 2-(2,4-dichlorophenoxy)propionic acid-degrading soil bacterium. Appl. Microbiol. Biotechnol. 33:213-216.
-
(1990)
Appl. Microbiol. Biotechnol.
, vol.33
, pp. 213-216
-
-
Horvath, M.1
Dietzelmüller, G.2
Loidl, M.3
Streichsbier, F.4
-
22
-
-
0036304247
-
tfdA-like genes in 2,4-dichlorophenoxyacetic acid-degrading bacteria belonging to the Bradyrhizobium-Agromonas-Nitrobacter-Afipia cluster in α-Proteobacteria
-
Itoh, K., R. Kanda, Y. Sumita, H. Kim, V. Kamagata, K. Suyama, H. Yamamoto, R. P. Hausinger, and J. M. Tiedje. 2002. tfdA-like genes in 2,4-dichlorophenoxyacetic acid-degrading bacteria belonging to the Bradyrhizobium-Agromonas-Nitrobacter-Afipia cluster in α-Proteobacteria. Appl. Environ. Microbiol. 68:3449-3454.
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 3449-3454
-
-
Itoh, K.1
Kanda, R.2
Sumita, Y.3
Kim, H.4
Kamagata, V.5
Suyama, K.6
Yamamoto, H.7
Hausinger, R.P.8
Tiedje, J.M.9
-
23
-
-
4644289160
-
Root nodule Bradyrhizobium spp. harbor tfdAα and cadA, homologous with genes encoding 2,4-dichlorophenoxyacetic acid-degrading proteins
-
Itoh, K., K. Y. Tashiro, Uobe, Y. Kamagata, K. Suyama, and H. Yamamoto. 2004. Root nodule Bradyrhizobium spp. harbor tfdAα and cadA, homologous with genes encoding 2,4-dichlorophenoxyacetic acid-degrading proteins. Appl. Environ. Microbiol. 70:2110-2118.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 2110-2118
-
-
Itoh, K.1
Tashiro, K.Y.2
Uobe3
Kamagata, Y.4
Suyama, K.5
Yamamoto, H.6
-
24
-
-
0036134929
-
Novel 2,4-dichlorophenoxyacetic acid degradation genes from oligotrophic Bradyrhizobium sp. strain HW13 isolated from a pristine environment
-
Kitagawa, W., S. Takami, K. Miyauchi, E. Masai, Y. Kamagata, J. M. Tiedje, and M. Fukuda. 2002. Novel 2,4-dichlorophenoxyacetic acid degradation genes from oligotrophic Bradyrhizobium sp. strain HW13 isolated from a pristine environment. J. Bacteriol. 184:509-518.
-
(2002)
J. Bacteriol.
, vol.184
, pp. 509-518
-
-
Kitagawa, W.1
Takami, S.2
Miyauchi, K.3
Masai, E.4
Kamagata, Y.5
Tiedje, J.M.6
Fukuda, M.7
-
25
-
-
0031767939
-
Detection of chlorocatechol 1,2-dioxygenase genes in proteobacteria by PCR and gene probes
-
Kleinsteuber, S., D. Hoffmann, R. H. Müller, and W. Babel. 1998. Detection of chlorocatechol 1,2-dioxygenase genes in proteobacteria by PCR and gene probes. Acta Biotechnol. 18:231-240.
-
(1998)
Acta Biotechnol.
, vol.18
, pp. 231-240
-
-
Kleinsteuber, S.1
Hoffmann, D.2
Müller, R.H.3
Babel, W.4
-
26
-
-
0036139211
-
MEGA2: Molecular evolutionary genetics analysis software
-
Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics 17:1244-1245.
-
(2001)
Bioinformatics
, vol.17
, pp. 1244-1245
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
27
-
-
0033846629
-
Efficient amplification of multiple transposon-flanking sequences
-
Kwon, Y. M., and S. C. Ricke. 2000. Efficient amplification of multiple transposon-flanking sequences. J. Microbiol. Methods 41:195-199.
-
(2000)
J. Microbiol. Methods
, vol.41
, pp. 195-199
-
-
Kwon, Y.M.1
Ricke, S.C.2
-
28
-
-
0032883206
-
Transposon Tn21, flagship of the floating genome
-
Liebert, C. A., R. M. Hall, and A. O. Summers. 1999. Transposon Tn21, flagship of the floating genome. Microbiol. Mol. Biol. Rev. 63:507-522.
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 507-522
-
-
Liebert, C.A.1
Hall, R.M.2
Summers, A.O.3
-
29
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig, W., O. Strunk, R. Westram, L. Richter, H. Meier, Yadhukumar, A. Buchner, T. Lai, S. Steppi, G. Jobb, W. Forster, I. Brettske, S. Gerber, A. W. Ginhart, O. Gross, S. Grumann, S. Hermann, R. Jost, A Konig, T. Liss, R. Lussmann, M. May, B. Nonhoff, B. Reichel, R. Strehlow, A. Stamatakis, N. Stuckmann, A. Vilbig, M. Lenke, T. Ludwig, A Bode, and K. H. Schleifer. 2004. ARB: a software environment for sequence data. Nucleic Acids Res. 32:1363-1371.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar6
Buchner, A.7
Lai, T.8
Steppi, S.9
Jobb, G.10
Forster, W.11
Brettske, I.12
Gerber, S.13
Ginhart, A.W.14
Gross, O.15
Grumann, S.16
Hermann, S.17
Jost, R.18
Konig, A.19
Liss, T.20
Lussmann, R.21
May, M.22
Nonhoff, B.23
Reichel, B.24
Strehlow, R.25
Stamatakis, A.26
Stuckmann, N.27
Vilbig, A.28
Lenke, M.29
Ludwig, T.30
Bode, A.31
Schleifer, K.H.32
more..
-
30
-
-
0034893398
-
Mineralization and cometabolic degradation of phenoxyalkanoic acid herbicides by a pure bacterial culture isolated from an aquifer
-
Mai, P., O. S. Jacobsen, and J. Aamand. 2001. Mineralization and cometabolic degradation of phenoxyalkanoic acid herbicides by a pure bacterial culture isolated from an aquifer. Appl. Microbiol. Biotechnol. 56:486-490.
-
(2001)
Appl. Microbiol. Biotechnol.
, vol.56
, pp. 486-490
-
-
Mai, P.1
Jacobsen, O.S.2
Aamand, J.3
-
31
-
-
0029990486
-
Degradation of 2,4-dichlorophenoxyacetic acid by haloalkaliphilic bacteria
-
Maltseva, O., C. McGowan, R. Fulthorpe, and P. Oriel. 1996. Degradation of 2,4-dichlorophenoxyacetic acid by haloalkaliphilic bacteria. Microbiology 142:1115-1122.
-
(1996)
Microbiology
, vol.142
, pp. 1115-1122
-
-
Maltseva, O.1
McGowan, C.2
Fulthorpe, R.3
Oriel, P.4
-
32
-
-
0034811709
-
Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP
-
Martinez, B., J. Tomkins, L. P. Wackelt, R. Wing, and M. J. Sadowsky. 2001. Complete nucleotide sequence and organization of the atrazine catabolic plasmid pADP-1 from Pseudomonas sp. strain ADP. J. Bacteriol. 183:5684-5697.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 5684-5697
-
-
Martinez, B.1
Tomkins, J.2
Wackelt, L.P.3
Wing, R.4
Sadowsky, M.J.5
-
33
-
-
0031660780
-
Evidence for interspecies gene transfer in the evolution of 2,4-dichlorophenoxyacetic acid degraders
-
McGowan, C., R. Fulthorpe, A. Wright, and J. M. Tiedje. 1998. Evidence for interspecies gene transfer in the evolution of 2,4-dichlorophenoxyacetic acid degraders. Appl. Environ. Microbiol. 64:4089-4092.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 4089-4092
-
-
McGowan, C.1
Fulthorpe, R.2
Wright, A.3
Tiedje, J.M.4
-
34
-
-
0343485082
-
Separation of two dichlorprop/α-ketoglutarate dioxygenases with enantiospecific properties from Comamonas acidovorans MC1
-
Müller, R. H., and W. Babel. 1999. Separation of two dichlorprop/α-ketoglutarate dioxygenases with enantiospecific properties from Comamonas acidovorans MC1. Acta Biotechnol. 19:349-355.
-
(1999)
Acta Biotechnol.
, vol.19
, pp. 349-355
-
-
Müller, R.H.1
Babel, W.2
-
35
-
-
0342679996
-
Comamonas acidovorans strain MC1: A new isolate capable of degrading the chiral herbicides dichlorprop and mecoprop and the herbicides 2,4-D and MCPA
-
Müller, R. H., S. Jorks, S. Kleinsteuber, and W. Babel. 1999. Comamonas acidovorans strain MC1: a new isolate capable of degrading the chiral herbicides dichlorprop and mecoprop and the herbicides 2,4-D and MCPA. Microbiol. Res. 154:241-246.
-
(1999)
Microbiol. Res.
, vol.154
, pp. 241-246
-
-
Müller, R.H.1
Jorks, S.2
Kleinsteuber, S.3
Babel, W.4
-
36
-
-
0034808426
-
Physiological and genetic characteristics of two bacterial strains utilizing phenoxypropionate and phenoxyacetate herbicides
-
Müller, R. H., S. Kleinsteuber, and W. Babel. 2001. Physiological and genetic characteristics of two bacterial strains utilizing phenoxypropionate and phenoxyacetate herbicides. Microbiol. Res. 156:121-131.
-
(2001)
Microbiol. Res.
, vol.156
, pp. 121-131
-
-
Müller, R.H.1
Kleinsteuber, S.2
Babel, W.3
-
37
-
-
0037345571
-
Evolution of a chlorobenzene degradative pathway among bacteria in a contaminated groundwater mediated by a genomic island in Ralstonia
-
Müller, T. A., C. Werlen, J. Spain, and J. R. van der Meer. 2003. Evolution of a chlorobenzene degradative pathway among bacteria in a contaminated groundwater mediated by a genomic island in Ralstonia. Environ. Microbiol. 5:163-173.
-
(2003)
Environ. Microbiol.
, vol.5
, pp. 163-173
-
-
Müller, T.A.1
Werlen, C.2
Spain, J.3
Van Der Meer, J.R.4
-
38
-
-
0030708622
-
Involvement of two α-ketoglutarate-dependent dioxygenases in enantioselective degradation of (R)- and (S)-mecoprop by Sphingomonas herbicidovorans MH
-
Nickel, K., Suter, M. J. F., and H. P. E. Kohler. 1997. Involvement of two α-ketoglutarate-dependent dioxygenases in enantioselective degradation of (R)- and (S)-mecoprop by Sphingomonas herbicidovorans MH. J. Bacteriol. 179:6674-6679.
-
(1997)
J. Bacteriol.
, vol.179
, pp. 6674-6679
-
-
Nickel, K.1
Suter, M.J.F.2
Kohler, H.P.E.3
-
39
-
-
0033515813
-
Stereospecific degradation of the phenoxypropionate herbicide dichlorprop
-
Saari, R. E., D. A. Hogan, and R. P. Hausinger. 1999. Stereospecific degradation of the phenoxypropionate herbicide dichlorprop. J. Mol. Cat. B 6:421-128.
-
(1999)
J. Mol. Cat. B
, vol.6
, pp. 421-128
-
-
Saari, R.E.1
Hogan, D.A.2
Hausinger, R.P.3
-
40
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., and D. W. Russell. 2001. Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(2001)
Molecular Cloning: A Laboratory Manual, 3rd Ed.
-
-
Sambrook, J.1
Russell, D.W.2
-
42
-
-
0035214936
-
Characterization of (R/S)-mecoprop [2-(2-methyl-4-chlorophenoxy)propionic acid]-degrading Alcaligenes sp. CS1 and Ralstonia sp. CS2 isolated from agricultural soils
-
Smejkal, C. W., T. Vallaeys, F. A. Seymour, S. K. Burton, and H. M. Lappin-Scott. 2001. Characterization of (R/S)-mecoprop [2-(2-methyl-4- chlorophenoxy)propionic acid]-degrading Alcaligenes sp. CS1 and Ralstonia sp. CS2 isolated from agricultural soils. Environ. Microbiol. 3:288-293.
-
(2001)
Environ. Microbiol.
, vol.3
, pp. 288-293
-
-
Smejkal, C.W.1
Vallaeys, T.2
Seymour, F.A.3
Burton, S.K.4
Lappin-Scott, H.M.5
-
44
-
-
4243503109
-
Isolation of unknown flanking DNA by a simple two-step polymerase chain reaction method
-
Sorensen, A. B., M. Duch, and F. S. Pedersen. 1999. Isolation of unknown flanking DNA by a simple two-step polymerase chain reaction method. DYNALogue 99:2-3.
-
(1999)
DYNALogue
, vol.99
, pp. 2-3
-
-
Sorensen, A.B.1
Duch, M.2
Pedersen, F.S.3
-
45
-
-
0023191349
-
Analysis, cloning, and high-level expression of 2,4- dichlorophenoxyacetate monooxygenase gene tfdA of Alcaligenes eutrophus JMP134
-
Streber, W. R., K. N. Timmis, and M. H. Zenk. 1987. Analysis, cloning, and high-level expression of 2,4-dichlorophenoxyacetate monooxygenase gene tfdA of Alcaligenes eutrophus JMP134. J. Bacteriol. 169:2950-2955.
-
(1987)
J. Bacteriol.
, vol.169
, pp. 2950-2955
-
-
Streber, W.R.1
Timmis, K.N.2
Zenk, M.H.3
-
46
-
-
0342506458
-
Green fluorescent protein-based reporter systems for genetic analysis of bacteria including monocopy applications
-
Suarez, A., A. Güttler, M. Stratz, L. H. Staendner, K. N. Timmis, and C. A. Guzmán. 1997. Green fluorescent protein-based reporter systems for genetic analysis of bacteria including monocopy applications. Gene 196:69-74.
-
(1997)
Gene
, vol.196
, pp. 69-74
-
-
Suarez, A.1
Güttler, A.2
Stratz, M.3
Staendner, L.H.4
Timmis, K.N.5
Guzmán, C.A.6
-
47
-
-
0029903298
-
Characterization of a chromosomally encoded 2,4-dichlorophenoxyacetic acid/α-ketoglutarate dioxygenase from Burkholderia sp. strain RASC
-
Suwa, Y., A. D. Wright, F. Fukimori, K. A. Mummy, R. P. Hausinger, W. E. Holben, and L. J. Forney. 1996. Characterization of a chromosomally encoded 2,4-dichlorophenoxyacetic acid/α-ketoglutarate dioxygenase from Burkholderia sp. strain RASC. Appl. Environ. Microbiol. 62:2464-2469.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2464-2469
-
-
Suwa, Y.1
Wright, A.D.2
Fukimori, F.3
Mummy, K.A.4
Hausinger, R.P.5
Holben, W.E.6
Forney, L.J.7
-
48
-
-
0034919134
-
Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novoshingobium, and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses
-
Takeuchi, M., K. Hamana, and A. Hiraishi. 2001. Proposal of the genus Sphingomonas sensu stricto and three new genera, Sphingobium, Novoshingobium, and Sphingopyxis, on the basis of phylogenetic and chemotaxonomic analyses. Int. J. Syst. Evol. Microbiol. 51:1405-1417.
-
(2001)
Int. J. Syst. Evol. Microbiol.
, vol.51
, pp. 1405-1417
-
-
Takeuchi, M.1
Hamana, K.2
Hiraishi, A.3
-
49
-
-
0033912362
-
IS1294, a DNA element that transposes by RC transposition
-
Tavakoli, N., A. Comanducci, H. M. Dodd, M. C. Lett, B. Albiger, and P. Bennett. 2000. IS1294, a DNA element that transposes by RC transposition. Plasmid 44:66-84.
-
(2000)
Plasmid
, vol.44
, pp. 66-84
-
-
Tavakoli, N.1
Comanducci, A.2
Dodd, H.M.3
Lett, M.C.4
Albiger, B.5
Bennett, P.6
-
50
-
-
0028132696
-
Enantioselective degradation of the herbicide mecoprop [2-(2-methyl-4-chlorophenoxy)propionic acid] by mixed and pure bacterial cultures
-
Tett, V. A., A. J. Willets, and H. M. Lappin-Scott. 1994. Enantioselective degradation of the herbicide mecoprop [2-(2-methyl-4- chlorophenoxy)propionic acid] by mixed and pure bacterial cultures. FEMS Microb. Ecol. 14:191-200.
-
(1994)
FEMS Microb. Ecol.
, vol.14
, pp. 191-200
-
-
Tett, V.A.1
Willets, A.J.2
Lappin-Scott, H.M.3
-
51
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
52
-
-
0034821239
-
Nested deletions of the SRL pathogenicity island of Shigella flexneri 2a
-
Turner, S. A., S. N. Luck, H. Sakellaris, K. Rajakumar, and B. Adler. 2001. Nested deletions of the SRL pathogenicity island of Shigella flexneri 2a. J. Bacteriol. 183:5535-5543.
-
(2001)
J. Bacteriol.
, vol.183
, pp. 5535-5543
-
-
Turner, S.A.1
Luck, S.N.2
Sakellaris, H.3
Rajakumar, K.4
Adler, B.5
-
53
-
-
0030200765
-
The metabolic pathway of 2,4-dichlorophenoxyacetic acid degradation involves different families of tfdA and tfdB genes according to PCR-RFLP analysis
-
Vallaeys, T., R. R. Fulthorpe, A. M. Wright, and G. Soulas. 1996. The metabolic pathway of 2,4-dichlorophenoxyacetic acid degradation involves different families of tfdA and tfdB genes according to PCR-RFLP analysis. FEMS Microbiol. Ecol. 20:163-172.
-
(1996)
FEMS Microbiol. Ecol.
, vol.20
, pp. 163-172
-
-
Vallaeys, T.1
Fulthorpe, R.R.2
Wright, A.M.3
Soulas, G.4
-
54
-
-
0030692749
-
RCR-RFLP analysis of 16S rRNA, tfdA, and tfdB genes reveals a diversity of 2,4-D degraders in soil aggregates
-
Vallaeys, T., F. Persello-Carieaux, N. Rouard, C. Lors, G. Laguerre, and G. Soulas. 1997. RCR-RFLP analysis of 16S rRNA, tfdA, and tfdB genes reveals a diversity of 2,4-D degraders in soil aggregates. FEMS Microbiol. Ecol. 24:269-278.
-
(1997)
FEMS Microbiol. Ecol.
, vol.24
, pp. 269-278
-
-
Vallaeys, T.1
Persello-Carieaux, F.2
Rouard, N.3
Lors, C.4
Laguerre, G.5
Soulas, G.6
-
55
-
-
0031788393
-
Isolation and characterization of a stable 2,4-dichlorophenoxyacetic acid degrading bacterium, Variovorax paradoxus, using chemostat culture
-
Vallaeys, T., L. Albino, G. Soulas, A. D. Wright, and A. J. Weightman. 1998. Isolation and characterization of a stable 2,4-dichlorophenoxyacetic acid degrading bacterium, Variovorax paradoxus, using chemostat culture. Biotechnol. Lett. 20:1073-1076.
-
(1998)
Biotechnol. Lett.
, vol.20
, pp. 1073-1076
-
-
Vallaeys, T.1
Albino, L.2
Soulas, G.3
Wright, A.D.4
Weightman, A.J.5
-
56
-
-
0342844467
-
Analysis of the 2,4-dichlorophenoxyacetic acid-degradative plasmid pEST4011 of Achromobacter xylosoxidans subsp. denitrificans strain EST4002
-
Vedler, E., V. Koiv, and A. Heinaru. 2000. Analysis of the 2,4-dichlorophenoxyacetic acid-degradative plasmid pEST4011 of Achromobacter xylosoxidans subsp. denitrificans strain EST4002. Gene 255:281-288.
-
(2000)
Gene
, vol.255
, pp. 281-288
-
-
Vedler, E.1
Koiv, V.2
Heinaru, A.3
-
57
-
-
0036453738
-
The two enantiospecific dichlorprop/α-ketoglutarate-dioxygenases from Delftia acidovorans MC1: Protein and sequence data of RdpA and SdpA
-
Westendorf, A., D. Benndorf, R. H. Müller, and W. Babel. 2002. The two enantiospecific dichlorprop/α-ketoglutarate-dioxygenases from Delftia acidovorans MC1: protein and sequence data of RdpA and SdpA. Microbiol. Res. 157:317-322.
-
(2002)
Microbiol. Res.
, vol.157
, pp. 317-322
-
-
Westendorf, A.1
Benndorf, D.2
Müller, R.H.3
Babel, W.4
-
58
-
-
0037272923
-
Purification and characterisation of the enantiospecific dioxygenases from Delftia acidovorans MC1 initiating the degradation of phenoxypropionate and phenoxyacetate herbicides
-
Westendorf, A., R. H. Müller, and W. Babel. 2003. Purification and characterisation of the enantiospecific dioxygenases from Delftia acidovorans MC1 initiating the degradation of phenoxypropionate and phenoxyacetate herbicides. Acta Biotechnol. 23:3-17.
-
(2003)
Acta Biotechnol.
, vol.23
, pp. 3-17
-
-
Westendorf, A.1
Müller, R.H.2
Babel, W.3
-
59
-
-
0030983568
-
Metal coordination environment of a Cu(II)-substituted α-keto acid-dependent dioxygenase that degrades the herbicide 2,4-D
-
Whiting, A. K., L. Que, R. E. Saari, R. P. Hausinger, M. A. Fredrick, and J. McCracken. 1997. Metal coordination environment of a Cu(II)-substituted α-keto acid-dependent dioxygenase that degrades the herbicide 2,4-D. J. Am. Chem. Soc. 119:3413-3414.
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 3413-3414
-
-
Whiting, A.K.1
Que, L.2
Saari, R.E.3
Hausinger, R.P.4
Fredrick, M.A.5
McCracken, J.6
-
60
-
-
0031802163
-
Enantioselective uptake and degradation of the chiral herbicide dichlorprop [(RS)-2-(2,4-dichlorophenoxy)propanoic acid] by Sphingomonas herbicidovorans MH
-
Zipper, C., M. Bunk, and A. J. B. Zehnder. 1998. Enantioselective uptake and degradation of the chiral herbicide dichlorprop [(RS)-2-(2,4- dichlorophenoxy)propanoic acid] by Sphingomonas herbicidovorans MH. J. Bacteriol. 180:3368-3374.
-
(1998)
J. Bacteriol.
, vol.180
, pp. 3368-3374
-
-
Zipper, C.1
Bunk, M.2
Zehnder, A.J.B.3
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