-
1
-
-
70349536422
-
The primary photoreaction of rhodopsin
-
(Stavenga, D. G., DeGrip, W. J., and Pugh, E. N. J., Eds.), Elsevier Science B. V., Amsterdam, The Netherlands
-
Mathies, R. A., and Lugtenburg, J. (2000) The primary photoreaction of rhodopsin, in Molecular Mechanisms in Visual Transduction (Stavenga, D. G., DeGrip, W. J., and Pugh, E. N. J., Eds.) pp 55-90, Elsevier Science B. V., Amsterdam, The Netherlands.
-
(2000)
Molecular Mechanisms in Visual Transduction
, pp. 55-90
-
-
Mathies, R.A.1
Lugtenburg, J.2
-
2
-
-
85005697420
-
Ultrafast spectroscopy of rhodopsins - Photochemistry at its best!
-
Kochendoerfer, G. G., and Mathies, R. A. (1995) Ultrafast spectroscopy of rhodopsins - Photochemistry at its best! Isr. J. Chem. 35, 211-226.
-
(1995)
Isr. J. Chem.
, vol.35
, pp. 211-226
-
-
Kochendoerfer, G.G.1
Mathies, R.A.2
-
3
-
-
0032987196
-
Closing in on bacteriorhodopsin: Progress in understanding the molecule
-
Haupts, U., Tittor, J., and Oesterhelt, D. (1999) Closing in on bacteriorhodopsin: Progress in understanding the molecule, Annu. Rev. Biophys. Biomol. Struct. 28, 367-399.
-
(1999)
Annu. Rev. Biophys. Biomol. Struct.
, vol.28
, pp. 367-399
-
-
Haupts, U.1
Tittor, J.2
Oesterhelt, D.3
-
4
-
-
0031306645
-
Nano- and microsecond time-resolved FTIR spectroscopy of the halorhodopsin photocycle
-
Dioumaev, A. K., and Braiman, M. S. (1997) Nano- and microsecond time-resolved FTIR spectroscopy of the halorhodopsin photocycle, Photochem. Photobio. 66, 755-763.
-
(1997)
Photochem. Photobio.
, vol.66
, pp. 755-763
-
-
Dioumaev, A.K.1
Braiman, M.S.2
-
5
-
-
0037468225
-
Photoactive yellow protein, a new type of photoreceptor protein: Will this "yellow lab" bring us where we want to go?
-
Hellingwerf, K. J., Hendriks, J., and Gensch, T. (2003) Photoactive yellow protein, a new type of photoreceptor protein: Will this "yellow lab" bring us where we want to go? J. Phys. Chem. A 107, 1082-1094.
-
(2003)
J. Phys. Chem. A
, vol.107
, pp. 1082-1094
-
-
Hellingwerf, K.J.1
Hendriks, J.2
Gensch, T.3
-
6
-
-
0033576250
-
Protonation state and structural changes of the tetrapyrrole chromophore during the P-r → P-fr phototransformation of phytochrome: A resonance Raman spectroscopic study
-
Kneip, C., Hildebrandt, P., Schlamann, W., Braslavsky, S. E., Mark, P., and Schaffner, K. (1999) Protonation state and structural changes of the tetrapyrrole chromophore during the P-r → P-fr phototransformation of phytochrome: A resonance Raman spectroscopic study, Biochemistry 38, 15185-15192.
-
(1999)
Biochemistry
, vol.38
, pp. 15185-15192
-
-
Kneip, C.1
Hildebrandt, P.2
Schlamann, W.3
Braslavsky, S.E.4
Mark, P.5
Schaffner, K.6
-
7
-
-
77957098913
-
-
(Hader, D.-P., and Bert, M., Eds.), Elsevier, Amsterdam, The Netherlands
-
Williams, R. E., and Braslavsky, S. E. (2001) in Comprehensive Series in Photosciences (Hader, D.-P., and Bert, M., Eds.) pp 15-50, Elsevier, Amsterdam, The Netherlands.
-
(2001)
Comprehensive Series in Photosciences
, pp. 15-50
-
-
Williams, R.E.1
Braslavsky, S.E.2
-
8
-
-
0026091595
-
The 1st step in vision-femtosecond isomerization of rhodopsin
-
Schoenlein, R. W., Peteanu, L. A., Mathies, R. A., and Shank, C. V. (1991) The 1st step in vision-femtosecond isomerization of rhodopsin, Science 254, 412-415.
-
(1991)
Science
, vol.254
, pp. 412-415
-
-
Schoenlein, R.W.1
Peteanu, L.A.2
Mathies, R.A.3
Shank, C.V.4
-
9
-
-
0027333436
-
The 1st step in vision occurs in femtoseconds - Complete blue and red spectral studies
-
Peteanu, L. A., Schoenlein, R. W., Wang, Q., Mathies, R. A., and Shank, C. V. (1993) The 1st step in vision occurs in femtoseconds - Complete blue and red spectral studies, Proc. Natl. Acad. Sci. U.S.A. 90, 11762-11766.
-
(1993)
Proc. Natl. Acad. Sci. U.S.A.
, vol.90
, pp. 11762-11766
-
-
Peteanu, L.A.1
Schoenlein, R.W.2
Wang, Q.3
Mathies, R.A.4
Shank, C.V.5
-
10
-
-
0035923444
-
Wavelength-dependent cis-trans isomerization in vision
-
Kim, J. E., Tauber, M. J., and Mathies, R. A. (2001) Wavelength-dependent cis-trans isomerization in vision, Biochemistry 40, 13774-13778.
-
(2001)
Biochemistry
, vol.40
, pp. 13774-13778
-
-
Kim, J.E.1
Tauber, M.J.2
Mathies, R.A.3
-
11
-
-
0032477819
-
An additional methyl group at the 10-position of retinal dramatically slows down the kinetics of the rhodopsin photocascade
-
DeLange, F., Bovee-Geurts, P. H. M., VanOostrum, J., Portier, M. D., Verdegem, P. J. E., Lugtenburg, J., and DeGrip, W. J. (1998) An additional methyl group at the 10-position of retinal dramatically slows down the kinetics of the rhodopsin photocascade, Biochemistry 37, 1411-1420.
-
(1998)
Biochemistry
, vol.37
, pp. 1411-1420
-
-
DeLange, F.1
Bovee-Geurts, P.H.M.2
VanOostrum, J.3
Portier, M.D.4
Verdegem, P.J.E.5
Lugtenburg, J.6
DeGrip, W.J.7
-
12
-
-
0018567294
-
Energy uptake in the 1st step of visual excitation
-
Cooper, A. (1979) Energy uptake in the 1st step of visual excitation. Nature 282, 531.
-
(1979)
Nature
, vol.282
, pp. 531
-
-
Cooper, A.1
-
13
-
-
0000127455
-
Molecular-dynamics of the primary photochemical event in rhodopsin
-
Tallent, J. R., Hyde, E. W., Findsen, L. A., Fox, G. C., and Birge, R. R. (1992) Molecular-dynamics of the primary photochemical event in rhodopsin, J. Am. Chem. Soc. 114, 1581-1592.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 1581-1592
-
-
Tallent, J.R.1
Hyde, E.W.2
Findsen, L.A.3
Fox, G.C.4
Birge, R.R.5
-
14
-
-
0023219466
-
Energy-storage in the primary photochemical events of rhodopsin and isorhodopsin
-
Schick, G. A., Cooper, T. M., Holloway, R. A., Murray, L. P., and Birge, R. R. (1987) Energy-storage in the primary photochemical events of rhodopsin and isorhodopsin, Biochemistry 26, 2556-2562.
-
(1987)
Biochemistry
, vol.26
, pp. 2556-2562
-
-
Schick, G.A.1
Cooper, T.M.2
Holloway, R.A.3
Murray, L.P.4
Birge, R.R.5
-
15
-
-
0038219823
-
Picosecond dynamics of G-protein coupled receptor activation in rhodopsin from time-resolved UV resonance Raman spectroscopy
-
Kim, J. E., Pan, D. H., and Mathies, R. A. (2003) Picosecond dynamics of G-protein coupled receptor activation in rhodopsin from time-resolved UV resonance Raman spectroscopy, Biochemistry 42, 5169-5175.
-
(2003)
Biochemistry
, vol.42
, pp. 5169-5175
-
-
Kim, J.E.1
Pan, D.H.2
Mathies, R.A.3
-
16
-
-
0036570054
-
Time-resolved resonance Raman analysis of chromophore structural changes in the formation and decay of rhodopsin's BSI
-
Pan, D., Ganim, Z., Kim, J. E., Verhoeven, M. A., Lugtenberg, J., and Mathies, R. A. (2002) Time-resolved resonance Raman analysis of chromophore structural changes in the formation and decay of rhodopsin's BSI, J. Am. Chem. Soc. 124, 4857-4864.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 4857-4864
-
-
Pan, D.1
Ganim, Z.2
Kim, J.E.3
Verhoeven, M.A.4
Lugtenberg, J.5
Mathies, R.A.6
-
17
-
-
0035800067
-
Chromophore structure in lumirhdopsin and metarhodopsin I by time-resolved resonance Raman microchip spectroscopy
-
Pan, D., and Mathies, R. A. (2001) Chromophore structure in lumirhdopsin and metarhodopsin I by time-resolved resonance Raman microchip spectroscopy, Biochemistry 40, 7929-7936.
-
(2001)
Biochemistry
, vol.40
, pp. 7929-7936
-
-
Pan, D.1
Mathies, R.A.2
-
18
-
-
85005746610
-
Application of FTIR to the investigation of dark structures and photoreactions of visual pigments
-
Siebert, F. (1995) Application of FTIR to the investigation of dark structures and photoreactions of visual pigments, Isr. J. Chem. 35, 309-323.
-
(1995)
Isr. J. Chem.
, vol.35
, pp. 309-323
-
-
Siebert, F.1
-
19
-
-
0041629657
-
Retinal counterion switch in the photoactivation of the G protein-coupled receptor rhodopsin
-
Yan, E. C. Y., Kazmi, M. A., Ganim, Z., Hou, J. M., Pan, D. H., Chang, B. S. W., Sakmar, T. P., and Mathies, R. A. (2003) Retinal counterion switch in the photoactivation of the G protein-coupled receptor rhodopsin, Proc. Natl. Acad. Sci. U.S.A. 100,9262-9267.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 9262-9267
-
-
Yan, E.C.Y.1
Kazmi, M.A.2
Ganim, Z.3
Hou, J.M.4
Pan, D.H.5
Chang, B.S.W.6
Sakmar, T.P.7
Mathies, R.A.8
-
20
-
-
85005717670
-
Structure and function of activated rhodopsin
-
Hofmann, K. P., Jager, S., and Ernst, O. P. (1995) Structure and function of activated rhodopsin, Isr. J. Chem. 35, 339-355.
-
(1995)
Isr. J. Chem.
, vol.35
, pp. 339-355
-
-
Hofmann, K.P.1
Jager, S.2
Ernst, O.P.3
-
21
-
-
0000329823
-
Photolyzed rhodopsin catalyzes the exchange of GTP for bound GDP in retinal rod outer segments
-
Fung, B. K. K., and Stryer, L. (1980) Photolyzed rhodopsin catalyzes the exchange of GTP for bound GDP in retinal rod outer segments, Proc. Natl. Acad. Sci. U.S.A. 77, 2500-2504.
-
(1980)
Proc. Natl. Acad. Sci. U.S.A.
, vol.77
, pp. 2500-2504
-
-
Fung, B.K.K.1
Stryer, L.2
-
22
-
-
0016289846
-
Resonance Raman spectroscopy of rhodopsin in retinal disk membranes
-
Oseroff, A. R., and Callender, R. H. (1974) Resonance Raman spectroscopy of rhodopsin in retinal disk membranes, Biochemistry 13, 4243-4248.
-
(1974)
Biochemistry
, vol.13
, pp. 4243-4248
-
-
Oseroff, A.R.1
Callender, R.H.2
-
23
-
-
0000437623
-
Primary photochemical event in vision-proton translocation
-
Peters, K., Applebury, M. L., and Rentzepis, P. M. (1977) Primary photochemical event in vision-proton translocation, Proc. Natl. Acad. Sci. U.S.A. 74, 3119-3123.
-
(1977)
Proc. Natl. Acad. Sci. U.S.A.
, vol.74
, pp. 3119-3123
-
-
Peters, K.1
Applebury, M.L.2
Rentzepis, P.M.3
-
24
-
-
0017111198
-
Structure of chromophoric group in bathorhodopsin
-
Fransen, M. R., Luyten, W. C. M. M., van Thuijl, J., Lugtenburg, J., Jansen, P. A. A., Vanbreugel, P. J. G. M., and Daemen, F. J. M. (1976) Structure of chromophoric group in bathorhodopsin, Nature 260, 726-727.
-
(1976)
Nature
, vol.260
, pp. 726-727
-
-
Fransen, M.R.1
Luyten, W.C.M.M.2
Van Thuijl, J.3
Lugtenburg, J.4
Jansen, P.A.A.5
Vanbreugel, P.J.G.M.6
Daemen, F.J.M.7
-
25
-
-
0018345284
-
Resonance Raman studies of bathorhodopsin - Evidence for a protonated Schiff-base linkage
-
Eyring, G., and Mathies, R. A. (1979) Resonance Raman studies of bathorhodopsin - Evidence for a protonated Schiff-base linkage, Proc. Natl. Acad. Sci. U.S.A. 76, 33-37.
-
(1979)
Proc. Natl. Acad. Sci. U.S.A.
, vol.76
, pp. 33-37
-
-
Eyring, G.1
Mathies, R.A.2
-
26
-
-
0019333910
-
Interpretation of the resonance Raman-spectrum of bathorhodopsin based on visual pigment analogs
-
Eyring, G., Curry, B., Mathies, R., Fransen, R., Palings, I., and Lugtenburg, J. (1980) Interpretation of the resonance Raman-spectrum of bathorhodopsin based on visual pigment analogs, Biochemistry 19, 2410-2418.
-
(1980)
Biochemistry
, vol.19
, pp. 2410-2418
-
-
Eyring, G.1
Curry, B.2
Mathies, R.3
Fransen, R.4
Palings, I.5
Lugtenburg, J.6
-
27
-
-
0020486598
-
Assignment and interpretation of hydrogen out-of-plane vibrations in the resonance Raman-spectra of rhodopsin and bathorhodopsin
-
Eyring, G., Curry, B., Broek, A., Lugtenburg, J., and Mathies, R. (1982) Assignment and interpretation of hydrogen out-of-plane vibrations in the resonance Raman-spectra of rhodopsin and bathorhodopsin, Biochemistry 21, 384-393.
-
(1982)
Biochemistry
, vol.21
, pp. 384-393
-
-
Eyring, G.1
Curry, B.2
Broek, A.3
Lugtenburg, J.4
Mathies, R.5
-
28
-
-
0024550169
-
Complete assignment of the hydrogen out-of-plane wagging vibrations of bathorhodopsin: Chromophore structure and energy storage in the primary photoproduct of vision
-
Palings, I., Van den Berg, E. M. M., Lugtenburg, J., and Mathies, R. A. (1989) Complete assignment of the hydrogen out-of-plane wagging vibrations of bathorhodopsin: Chromophore structure and energy storage in the primary photoproduct of vision, Biochemistry 28, 1498-1507.
-
(1989)
Biochemistry
, vol.28
, pp. 1498-1507
-
-
Palings, I.1
Van Den Berg, E.M.M.2
Lugtenburg, J.3
Mathies, R.A.4
-
29
-
-
0028916739
-
NMR constraints on the location of the retinal chromophore in rhodopsin and bathorhodopsin
-
Han, M., and Smith, S. O. (1995) NMR constraints on the location of the retinal chromophore in rhodopsin and bathorhodopsin, Biochemistry 34, 1425-1432.
-
(1995)
Biochemistry
, vol.34
, pp. 1425-1432
-
-
Han, M.1
Smith, S.O.2
-
30
-
-
0025919682
-
C-13 magic-angle spinning NMR-studies of bathorhodopsin, the primary photoproduct of rhodopsin
-
Smith, S. O., Courtin, J., DeGroot, H., Gebhard, R., and Lugtenburg, J. (1991) C-13 magic-angle spinning NMR-studies of bathorhodopsin, the primary photoproduct of rhodopsin, Biochemistry 30, 7409-7415.
-
(1991)
Biochemistry
, vol.30
, pp. 7409-7415
-
-
Smith, S.O.1
Courtin, J.2
DeGroot, H.3
Gebhard, R.4
Lugtenburg, J.5
-
31
-
-
33845554105
-
Energy-storage and reaction pathways in the 1st step of the vision process
-
Warshel, A., and Barboy, N. (1982) Energy-storage and reaction pathways in the 1st step of the vision process, J. Am. Chem. Soc. 104, 1469-1476.
-
(1982)
J. Am. Chem. Soc.
, vol.104
, pp. 1469-1476
-
-
Warshel, A.1
Barboy, N.2
-
32
-
-
0034682551
-
Rapid restoration of visual pigment and function with oral retinoid in a mouse model of childhood blindness
-
Van Hooser, J. P., Aleman, T. S., He, Y. G., Cideciyan, A. V., Kuksa, V., Pittler, S. J., Stone, E. M., Jacobson, S. G., and Palczewski, K. (2000) Rapid restoration of visual pigment and function with oral retinoid in a mouse model of childhood blindness, Proc. Natl. Acad. Sci. U.S.A. 97, 8623-8628.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 8623-8628
-
-
Van Hooser, J.P.1
Aleman, T.S.2
He, Y.G.3
Cideciyan, A.V.4
Kuksa, V.5
Pittler, S.J.6
Stone, E.M.7
Jacobson, S.G.8
Palczewski, K.9
-
33
-
-
0037197848
-
Functional role of internal water molecules in rhodopsin revealed by X-ray crystallography
-
Okada, T., Fujiyoshi, Y., Silow, M., Navarro, J., Landau, E. M., and Shichida, Y. (2002) Functional role of internal water molecules in rhodopsin revealed by X-ray crystallography, Proc. Natl. Acad. Sci. U.S.A. 99, 5982-5987.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 5982-5987
-
-
Okada, T.1
Fujiyoshi, Y.2
Silow, M.3
Navarro, J.4
Landau, E.M.5
Shichida, Y.6
-
34
-
-
0035800032
-
Advances in determination of a high-resolution three-dimensional structure of rhodopsin, a model of G-protein-coupled receptors (GPCRs)
-
Teller, D. C., Okada, T., Behnke, C. A., Palczewski, K., and Stenkamp, R. E. (2001) Advances in determination of a high-resolution three-dimensional structure of rhodopsin, a model of G-protein-coupled receptors (GPCRs), Biochemistry 40, 7761-7772.
-
(2001)
Biochemistry
, vol.40
, pp. 7761-7772
-
-
Teller, D.C.1
Okada, T.2
Behnke, C.A.3
Palczewski, K.4
Stenkamp, R.E.5
-
35
-
-
0035336676
-
Activation of rhodopsin: New insights from structural and biochemical studies
-
Okada, T., Ernst, O. P., Palczewski, K., and Hofmann, K. P. (2001) Activation of rhodopsin: New insights from structural and biochemical studies, Trends Biochem. Sci. 26, 318-324.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 318-324
-
-
Okada, T.1
Ernst, O.P.2
Palczewski, K.3
Hofmann, K.P.4
-
36
-
-
0037133528
-
Function of extracellular loop 2 in rhodopsin: Glutamic acid 181 modulates stability and absorption wavelength of metarhodopsin II
-
Yan, E. C. Y., Kazmi, M. A., De, S., Chang, B. S. W., Seibert, C., Marin, E. P., Mathies, R. A., and Sakmar, T. P. (2002) Function of extracellular loop 2 in rhodopsin: Glutamic acid 181 modulates stability and absorption wavelength of metarhodopsin II, Biochemistry 41, 3620-3627.
-
(2002)
Biochemistry
, vol.41
, pp. 3620-3627
-
-
Yan, E.C.Y.1
Kazmi, M.A.2
De, S.3
Chang, B.S.W.4
Seibert, C.5
Marin, E.P.6
Mathies, R.A.7
Sakmar, T.P.8
-
37
-
-
0027273840
-
Characterization of mutant rhodopsins responsible for autosomal-dominant retinitis-pigmentosa-mutations on the cytoplasmic surface affect tranducin activation
-
Min, K. C., Zvyaga, T. A., Cypess, A. M., and Sakmar, T. P. (1993) Characterization of mutant rhodopsins responsible for autosomal-dominant retinitis-pigmentosa-mutations on the cytoplasmic surface affect tranducin activation, J. Biol. Chem. 268, 9400-9404.
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 9400-9404
-
-
Min, K.C.1
Zvyaga, T.A.2
Cypess, A.M.3
Sakmar, T.P.4
-
38
-
-
0029730779
-
Functional interaction of transmembrane helices 3 and 6 in rhodopsin: Replacement of phenylalanine 261 by alanine causes reversion of phenotype of a glycine 121 replacement mutant
-
Han, M., Lin, S. W., Minkova, M., Smith, S. O., and Sakmar, T. P. (1996) Functional interaction of transmembrane helices 3 and 6 in rhodopsin: Replacement of phenylalanine 261 by alanine causes reversion of phenotype of a glycine 121 replacement mutant, J. Biol. Chem. 271, 32337-32342.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 32337-32342
-
-
Han, M.1
Lin, S.W.2
Minkova, M.3
Smith, S.O.4
Sakmar, T.P.5
-
39
-
-
0023215761
-
Assignment of fingerprint vibrations in the resonance Raman-spectra of rhodopsin, isorhodopsin, and bathorhodopsin - Implications for chromophore structure and environment
-
Palings, I., Pardoen, J. A., Vandenberg, E., Winkel, C., Lugtenburg, J., and Mathies, R. A. (1987) Assignment of fingerprint vibrations in the resonance Raman-spectra of rhodopsin, isorhodopsin, and bathorhodopsin - Implications for chromophore structure and environment, Biochemistry 26, 2544-2556.
-
(1987)
Biochemistry
, vol.26
, pp. 2544-2556
-
-
Palings, I.1
Pardoen, J.A.2
Vandenberg, E.3
Winkel, C.4
Lugtenburg, J.5
Mathies, R.A.6
-
40
-
-
7244247800
-
-
note
-
Frisch, M. J., Trucks, G. W., Schlegel, H. B., Scuseria, G. E., Robb, M. A., Cheeseman, J. R., Zakrzewski, V. G., Montgomery, J. A., Jr., Stratmann, R. E., Burant, J. C., Dapprich, S., Millam, J. M., Daniels, A. D., Kudin, K. N., Strain, M. C., Farkas, O., Tomasi, J., Barone, V., Cossi, M., Cammi, R., Mennucci, B., Pomelli, C., Adamo, C., Clifford, S., Ochterski, J., Petersson, G. A., Ayala, P. Y., Cui, Q., Morokuma, K., Rega, N., Salvador, P., Dannenberg, J. J., Malick, D. K., Rabuck, A. D., Raghavachari, K., Foresman, J. B., Cioslowski, J., Ortiz, J. V., Baboul, A. G., Stefanov, B. B., Liu, G., Liashenko, A., Piskorz, P., Komaromi, I., Gomperts, R., Martin, R. L., Fox, D. J., Keith, T., Al-Laham, M. A., Peng, C. Y., Nanayakkara, A., Challacombe, M., Gill, P. M. W., Johnson, B., Chen, W., Wong, M. W., Andres, J. L., Gonzalez, C., Head-Gordon, M., Replogle, E. S., and Pople, J. A. (2001) Gaussian, Inc., Pittsburgh, PA.
-
-
-
-
41
-
-
0000189651
-
Density-functional thermochemistry. III. The role of exact exchange
-
Becke, A. D. (1993) Density-functional thermochemistry. III. The role of exact exchange, J. Chem. Phys. 98, 5648-5652.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 5648-5652
-
-
Becke, A.D.1
-
42
-
-
0037091302
-
Ab Initio study of the isomerization of retinal chromophore and its derivatives
-
Lee, H. M., Kim, J., Kim, C., and Kim, K. S. (2002) Ab Initio study of the isomerization of retinal chromophore and its derivatives, J. Chem. Phys. 116, 6549-6559.
-
(2002)
J. Chem. Phys.
, vol.116
, pp. 6549-6559
-
-
Lee, H.M.1
Kim, J.2
Kim, C.3
Kim, K.S.4
-
43
-
-
0242325044
-
Use of group theory for band assignment and structure correlation
-
(Chalmers, J. M., and Griffin, P. R., Eds.), John Wiley and Sons, Chichester, U.K.
-
Tasumi, M., Sakamoto, A., Hieda, T., and Torii, H. (2002) Use of group theory for band assignment and structure correlation, in Handbook of Vibrational Spectroscopy (Chalmers, J. M., and Griffin, P. R., Eds.) Vol. 3, pp 1983-1991, John Wiley and Sons, Chichester, U.K.
-
(2002)
Handbook of Vibrational Spectroscopy
, vol.3
, pp. 1983-1991
-
-
Tasumi, M.1
Sakamoto, A.2
Hieda, T.3
Torii, H.4
-
44
-
-
0347690972
-
Resonance Raman and DFT studies of tera-tetra-butyl Porphine: Assignment of strongly enhanced distortion modes in a ruffled porphyrin
-
Oakes, R. E., Spence, S. J., and Bell, S. E. J. (2003) Resonance Raman and DFT studies of tera-tetra-butyl Porphine: Assignment of strongly enhanced distortion modes in a ruffled porphyrin, J. Phys. Chem. A 107, 2964-2973.
-
(2003)
J. Phys. Chem. A
, vol.107
, pp. 2964-2973
-
-
Oakes, R.E.1
Spence, S.J.2
Bell, S.E.J.3
-
45
-
-
0000117933
-
Low-frequency vibrations of all-trans-retinal: Far-infrared and Raman spectra and density functional calculations
-
Gervasio, F. L., Cardini, G., Salvi, P. R., and Schettino, V. (1998) Low-frequency vibrations of all-trans-retinal: Far-infrared and Raman spectra and density functional calculations, J. Phys. Chem. A 102, 2131-2136.
-
(1998)
J. Phys. Chem. A
, vol.102
, pp. 2131-2136
-
-
Gervasio, F.L.1
Cardini, G.2
Salvi, P.R.3
Schettino, V.4
-
46
-
-
0032131323
-
Molecular and crystal structures of 2-(all-trans-retinylidene)-indan-1,3- dione
-
Hashimito, H., Hattori, K., Okada, Y., Yoda, T., and Matsushima, R. (1998) Molecular and crystal structures of 2-(all-trans-retinylidene)-indan-1,3- dione, Jpn. J. Appl. Phys. 37, 4609-4615.
-
(1998)
Jpn. J. Appl. Phys.
, vol.37
, pp. 4609-4615
-
-
Hashimito, H.1
Hattori, K.2
Okada, Y.3
Yoda, T.4
Matsushima, R.5
-
47
-
-
0031552550
-
Theoretical studies of protonated and non-protonated Schiff bases of retinal: Ground-state structures and energies of the all-trans, 13-cis, 11-cis, 9-cis, 6,7-cis, and 6-s-cis isomers
-
Froese, R. D. J., Komaromi, I., Byun, K. S., and Morokuma, K. (1997) Theoretical studies of protonated and non-protonated Schiff bases of retinal: Ground-state structures and energies of the all-trans, 13-cis, 11-cis, 9-cis, 6,7-cis, and 6-s-cis isomers, Chem. Phys. Lett. 272, 335-340.
-
(1997)
Chem. Phys. Lett.
, vol.272
, pp. 335-340
-
-
Froese, R.D.J.1
Komaromi, I.2
Byun, K.S.3
Morokuma, K.4
-
48
-
-
0020405878
-
Vibrational analysis of all-trans-retinal
-
Curry, B., Broek, A., Lugtenburg, J., and Mathies, R. (1982) Vibrational analysis of all-trans-retinal, J. Am. Chem. Soc. 104, 5274-5286.
-
(1982)
J. Am. Chem. Soc.
, vol.104
, pp. 5274-5286
-
-
Curry, B.1
Broek, A.2
Lugtenburg, J.3
Mathies, R.4
-
49
-
-
0001246575
-
12 torsion coordinate
-
12 torsion coordinate, J. Phys. Chem. B 102, 2787-2806.
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 2787-2806
-
-
Lin, S.W.1
Groesbeek, M.2
Van Der Hoef, I.3
Verdegem, P.4
Lugtenburg, J.5
Mathies, R.A.6
-
50
-
-
0033963034
-
Molden: A pre- and post-processing program for molecular and electronic structures
-
Schaftenaar, G., and Noordik, J. H. (2000) Molden: A pre- and post-processing program for molecular and electronic structures, J. Comput.-Aided Mol. Des. 14, 123-134.
-
(2000)
J. Comput.-Aided Mol. Des.
, vol.14
, pp. 123-134
-
-
Schaftenaar, G.1
Noordik, J.H.2
-
51
-
-
0000423044
-
-
(Clark, J. H., and Hester, R. E., Eds.), Wiley Heyden, New York
-
Curry, B., Palings, I., Broek, A. D., Pardoen, J. A., Lugtenburg, J., and Mathies, R. A. (1985) in Advances in Infrared and Raman Spectroscopy (Clark, J. H., and Hester, R. E., Eds.) pp 115, Wiley Heyden, New York.
-
(1985)
Advances in Infrared and Raman Spectroscopy
, pp. 115
-
-
Curry, B.1
Palings, I.2
Broek, A.D.3
Pardoen, J.A.4
Lugtenburg, J.5
Mathies, R.A.6
-
52
-
-
0023228884
-
Factors affecting the C=N stretching in protonated retinal Schiff base: A model study for bacteriorhodspsin and visual pigments
-
Baasov, T., Friedman, N., and Sheves, M. (1987) Factors affecting the C=N stretching in protonated retinal Schiff base: A model study for bacteriorhodspsin and visual pigments, Biochemistry 26, 3210-3217.
-
(1987)
Biochemistry
, vol.26
, pp. 3210-3217
-
-
Baasov, T.1
Friedman, N.2
Sheves, M.3
-
53
-
-
0026750971
-
Resonance Raman microprobe spectroscopy of rhodopsin mutants: Effect of substitutions in the third transmembrane helix
-
Lin, S. W., Sakmar, T. P., Franke, R. R., Khorana, H. G., and Mathies, R. A. (1992) Resonance Raman microprobe spectroscopy of rhodopsin mutants: Effect of substitutions in the third transmembrane helix, Biochemistry 31, 5105-5111.
-
(1992)
Biochemistry
, vol.31
, pp. 5105-5111
-
-
Lin, S.W.1
Sakmar, T.P.2
Franke, R.R.3
Khorana, H.G.4
Mathies, R.A.5
-
54
-
-
0023117621
-
Raman microscope studies on the primary photochemistry of vertebrate visual pigments with absorption maxima from 430 to 502 nm
-
Barry, B., and Mathies, R. A. (1987) Raman microscope studies on the primary photochemistry of vertebrate visual pigments with absorption maxima from 430 to 502 nm, Biochemistry 26, 59-64.
-
(1987)
Biochemistry
, vol.26
, pp. 59-64
-
-
Barry, B.1
Mathies, R.A.2
-
55
-
-
0028316890
-
What makes red visual pigments red-A resonance Raman microprobe study of retinal chromophore structure in iodopsin
-
Lin, S. W., Imamoto, Y., Fukada, Y., Shichida, Y., Yoshizawa, T., and Mathies, R. A. (1994) What makes red visual pigments red-A resonance Raman microprobe study of retinal chromophore structure in iodopsin, Biochemistry 33, 2151-2160.
-
(1994)
Biochemistry
, vol.33
, pp. 2151-2160
-
-
Lin, S.W.1
Imamoto, Y.2
Fukada, Y.3
Shichida, Y.4
Yoshizawa, T.5
Mathies, R.A.6
-
56
-
-
0025743512
-
Resonance Raman studies of the HOOP modes in octopus bathorhodopsin with deuterium-labeled retinal chromophores
-
Deng, H., Manor, D., Weng, G., Rath, P., Koutalos, Y., Ebrey, T., Gebhard, R., Lugtenburg, J., Tsuda, M., and Callender, R. H. (1991) Resonance Raman studies of the HOOP modes in octopus bathorhodopsin with deuterium-labeled retinal chromophores, Biochemistry 30, 4495-4502.
-
(1991)
Biochemistry
, vol.30
, pp. 4495-4502
-
-
Deng, H.1
Manor, D.2
Weng, G.3
Rath, P.4
Koutalos, Y.5
Ebrey, T.6
Gebhard, R.7
Lugtenburg, J.8
Tsuda, M.9
Callender, R.H.10
-
57
-
-
0037076084
-
Isomer-specific interaction of the retinal chromophore with threonine-118 in rhodopsin
-
Nagata, T., Oura, T., Terakita, A., Kandori, H., and Shichida, Y. (2002) Isomer-specific interaction of the retinal chromophore with threonine-118 in rhodopsin, J. Phys. Chem. A 106, 1969-1975.
-
(2002)
J. Phys. Chem. A
, vol.106
, pp. 1969-1975
-
-
Nagata, T.1
Oura, T.2
Terakita, A.3
Kandori, H.4
Shichida, Y.5
-
58
-
-
0344736728
-
The molecular basis for the high photosensitivity of rhodopsin
-
Liu, R. S. H., and Colmenares, L. U. (2003) The molecular basis for the high photosensitivity of rhodopsin, Proc. Natl. Acad. Sci. U.S.A. 100, 14639-14644.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 14639-14644
-
-
Liu, R.S.H.1
Colmenares, L.U.2
-
59
-
-
0000915841
-
Description of steric relationships across single bonds
-
Klyne, W., and Prelog, V. (1960) Description of steric relationships across single bonds, Experientia 16, 521-523.
-
(1960)
Experientia
, vol.16
, pp. 521-523
-
-
Klyne, W.1
Prelog, V.2
-
60
-
-
0004003691
-
-
Dover Publications, Inc., New York
-
Wilson, E. B., Jr., Decius, J. C., and Cross, P. C. (1980) Molecular Vibrations, Dover Publications, Inc., New York.
-
(1980)
Molecular Vibrations
-
-
Wilson Jr., E.B.1
Decius, J.C.2
Cross, P.C.3
-
61
-
-
0000311181
-
Evidence for ligh-induced 13-cis, 14-s-cis isomerization in bacteriorhodopsin obtained by FTIR difference spectroscopy using isotopically labeled retinals
-
Gerwert, K., and Siebert, F. (1986) Evidence for ligh-induced 13-cis, 14-s-cis isomerization in bacteriorhodopsin obtained by FTIR difference spectroscopy using isotopically labeled retinals, EMBO J. 5, 805-811.
-
(1986)
EMBO J.
, vol.5
, pp. 805-811
-
-
Gerwert, K.1
Siebert, F.2
-
62
-
-
0034745934
-
Structure of the 1-1 early intermediate of photoactive yellow protein by FTIR spectroscopy
-
Brudler, R., Rammelsberg, R., Woo, T. T., Getzoff, E. D., and Gerwert, K. (2001) Structure of the 1-1 early intermediate of photoactive yellow protein by FTIR spectroscopy, Nat. Struct. Biol. 8, 265-270.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 265-270
-
-
Brudler, R.1
Rammelsberg, R.2
Woo, T.T.3
Getzoff, E.D.4
Gerwert, K.5
-
63
-
-
0029907599
-
Requirement of rigid-body motion of transmembrane helices for light activation of rhodopsin
-
Farrens, D. L., Altenbach, C., Yang, K., Hubbell, W. L., and Khorana, H. G. (1996) Requirement of rigid-body motion of transmembrane helices for light activation of rhodopsin, Science 274, 768-770.
-
(1996)
Science
, vol.274
, pp. 768-770
-
-
Farrens, D.L.1
Altenbach, C.2
Yang, K.3
Hubbell, W.L.4
Khorana, H.G.5
-
64
-
-
0242494879
-
Origin of the bathochromic shift in the early photointermediates of the rhodopsin visual cycle: A CASSCF/CASPT2 study
-
Schreiber, M., and Buss, V. (2003) Origin of the bathochromic shift in the early photointermediates of the rhodopsin visual cycle: A CASSCF/CASPT2 study, Int. J. Quantum Chem. 95, 882-889.
-
(2003)
Int. J. Quantum Chem.
, vol.95
, pp. 882-889
-
-
Schreiber, M.1
Buss, V.2
-
65
-
-
0037015153
-
Early steps of the intramolecular signal transduction in rhodopsin explored by molecular dynamics simulations
-
Rohrig, U. F., Guidoni, L., and Rothlisberger, U. (2002) Early steps of the intramolecular signal transduction in rhodopsin explored by molecular dynamics simulations, Biochemistry 41, 10799-10809.
-
(2002)
Biochemistry
, vol.41
, pp. 10799-10809
-
-
Rohrig, U.F.1
Guidoni, L.2
Rothlisberger, U.3
-
66
-
-
0037416434
-
Modelling of photointermediates suggests a mechanism of the flip of the β-ionone moiety of the retinylidene chromophore in the rhodopsin photocascade
-
Ishiguro, M., Hirano, T., and Oyama, Y. (2003) Modelling of photointermediates suggests a mechanism of the flip of the β-ionone moiety of the retinylidene chromophore in the rhodopsin photocascade, ChemBioChem 4, 228-231.
-
(2003)
ChemBioChem
, vol.4
, pp. 228-231
-
-
Ishiguro, M.1
Hirano, T.2
Oyama, Y.3
|