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Volumn 2008, Issue , 2008, Pages

Genome-based construction of the metabolic pathways of Orientia tsutsugamushi and comparative analysis within the Rickettsiales order

Author keywords

[No Author keywords available]

Indexed keywords

ABC TRANSPORTER; ALANINE RACEMASE; ARGININE; ASPARTIC ACID; CARRIER PROTEIN; DEAMINASE; DEOXYCYTIDINE TRIPHOSPHATE DEAMINASE; DIAMINOPIMELIC ACID; DIAMINOPIMELIC ACID F; DIHYDROLIPOAMIDE DEHYDROGENASE; FLAVINE ADENINE NUCLEOTIDE DEPENDENT THYMIDYLATED SYNTHASE; FRUCTOSE BISPHOSPHATASE; GLUTAMATE AMMONIA LIGASE; GLUTAMATE TRANSPORTER; GLYCINE; ISOCITRATE DEHYDROGENASE; LYSINE; MALATE DEHYDROGENASE; PROTOPORPHYRINOGEN OXIDASE; PYRUVATE PHOSPHATE DIKINASE; SYNTHETASE;

EID: 46349083911     PISSN: 15316912     EISSN: 15326268     Source Type: Journal    
DOI: 10.1155/2008/623145     Document Type: Review
Times cited : (44)

References (41)
  • 1
    • 0035119219 scopus 로고    scopus 로고
    • "Orientia tsutsugamushi infection: Overview and immune responses"
    • S.-Y. Seong, M.-S. Choi, and I.-S. Kim, "Orientia tsutsugamushi infection: Overview and immune responses," Microbes and Infection, vol. 3, no. 1, pp. 11-21, 2001.
    • (2001) Microbes and Infection , vol.3 , Issue.1 , pp. 11-21
    • Seong, S.-Y.1    Choi, M.-S.2    Kim, I.-S.3
  • 4
    • 0026055433 scopus 로고
    • "Specific amplification of Rickettsia tsutsugamushi DNA from clinical specimens by polymerase chain reaction"
    • Y. Furuya, Y. Yoshida, T. Katayama, et al., "Specific amplification of Rickettsia tsutsugamushi DNA from clinical specimens by polymerase chain reaction," Journal of Clinical Microbiology, vol. 29, no. 11, pp. 2628-2630, 1991.
    • (1991) Journal of Clinical Microbiology , vol.29 , Issue.11 , pp. 2628-2630
    • Furuya, Y.1    Yoshida, Y.2    Katayama, T.3
  • 5
    • 0019964884 scopus 로고
    • "Humoral and cellular responses in scrub typhus patients reflecting primary infection and reinfection with Rickettsia tsutsugamushi"
    • A. L. Bourgeois, J. G. Olson, R. C. Y. Fang, et al., "Humoral and cellular responses in scrub typhus patients reflecting primary infection and reinfection with Rickettsia tsutsugamushi," American Journal of Tropical Medicine and Hygiene, vol. 31, no. 3, pp. 532-540, 1982.
    • (1982) American Journal of Tropical Medicine and Hygiene , vol.31 , Issue.3 , pp. 532-540
    • Bourgeois, A.L.1    Olson, J.G.2    Fang, R.C.Y.3
  • 7
    • 15844405969 scopus 로고    scopus 로고
    • "Scrub typhus infections poorly responsive to antibiotics in northern Thailand"
    • G. Watt, C. Chouriyagune, R. Ruangweerayud, et al., "Scrub typhus infections poorly responsive to antibiotics in northern Thailand," The Lancet, vol. 348, no. 9020, pp. 86-89, 1996.
    • (1996) The Lancet , vol.348 , Issue.9020 , pp. 86-89
    • Watt, G.1    Chouriyagune, C.2    Ruangweerayud, R.3
  • 8
    • 2142744868 scopus 로고    scopus 로고
    • "Outbreak of hepatitis by Orientia tsutsugamushi in the early years of the new millenium"
    • pp. 198
    • J. I. Park, S. H. Han, S. C. Cho, et al., "Outbreak of hepatitis by Orientia tsutsugamushi in the early years of the new millenium," Taehan Kan Hakhoe Chi, vol. 9, no. 3, pp. 198 204, 2003.
    • (2003) Taehan Kan Hakhoe Chi , vol.9 , Issue.3 , pp. 204
    • Park, J.I.1    Han, S.H.2    Cho, S.C.3
  • 9
    • 0036954434 scopus 로고    scopus 로고
    • "Evaluation of national tsutsugamushi disease surveillance-Japan, 2000"
    • T. Matsui, M. H. Kramer, J. M. Mendlein, et al., "Evaluation of national tsutsugamushi disease surveillance-Japan, 2000," Japanese Journal of Infectious Diseases, vol. 55, no. 6, pp. 197-203, 2002.
    • (2002) Japanese Journal of Infectious Diseases , vol.55 , Issue.6 , pp. 197-203
    • Matsui, T.1    Kramer, M.H.2    Mendlein, J.M.3
  • 10
    • 0018664734 scopus 로고
    • "Gamma-irradiated scrub typhus immunogens: Broad-spectrum immunity with combinations of rickettsial strains"
    • G. H. Eisenberg Jr. and J. V. Osterman, "Gamma-irradiated scrub typhus immunogens: Broad-spectrum immunity with combinations of rickettsial strains," Infection and Immunity, vol. 26, no. 1, pp. 131-136, 1979.
    • (1979) Infection and Immunity , vol.26 , Issue.1 , pp. 131-136
    • Eisenberg Jr., G.H.1    Osterman, J.V.2
  • 11
    • 23344449535 scopus 로고    scopus 로고
    • "Scrub typhus vaccine candidate Kp r56 induces humoral and cellular immune responses in cynomolgus monkeys"
    • S. Chattopadhyay, J. Jiang, T.-C. Chan, et al., "Scrub typhus vaccine candidate Kp r56 induces humoral and cellular immune responses in cynomolgus monkeys," Infection and Immunity, vol. 73, no. 8, pp. 5039-5047, 2005.
    • (2005) Infection and Immunity , vol.73 , Issue.8 , pp. 5039-5047
    • Chattopadhyay, S.1    Jiang, J.2    Chan, T.-C.3
  • 12
    • 0029053123 scopus 로고
    • "Classification of Rickettsia tsutsugamushi in a new genus, Orientia gen. nov., as Orientia tsutsugamushi comb. nov"
    • A. Tamura, N. Ohashi, H. Urakami, and S. Miyamura, "Classification of Rickettsia tsutsugamushi in a new genus, Orientia gen. nov., as Orientia tsutsugamushi comb. nov," International Journal of Systematic Bacteriology, vol. 45, no. 3, pp. 589-591, 1995.
    • (1995) International Journal of Systematic Bacteriology , vol.45 , Issue.3 , pp. 589-591
    • Tamura, A.1    Ohashi, N.2    Urakami, H.3    Miyamura, S.4
  • 13
    • 33745699598 scopus 로고    scopus 로고
    • "New perspectives on rickettsial evolution from new genome sequences of Rickettsia, particularly R. canadensis, and Orientia tsutsugamushi"
    • M. E. Eremeeva, A. Madan, C. D. Shaw, K. Tang, and G. A. Dasch, "New perspectives on rickettsial evolution from new genome sequences of Rickettsia, particularly R. canadensis, and Orientia tsutsugamushi," Annals of the New York Academy of Sciences, vol. 1063, pp. 47-63, 2005.
    • (2005) Annals of the New York Academy of Sciences , vol.1063 , pp. 47-63
    • Eremeeva, M.E.1    Madan, A.2    Shaw, C.D.3    Tang, K.4    Dasch, G.A.5
  • 14
    • 34249944112 scopus 로고    scopus 로고
    • "The Orientia tsutsugamushi genome revealsmassive proliferation of conjugative type IV secretion system and host-cell interaction genes"
    • N.-H. Cho, H.-R. Kim, J.-H. Lee, et al., "The Orientia tsutsugamushi genome revealsmassive proliferation of conjugative type IV secretion system and host-cell interaction genes," Proceedings of the National Academy of Sciences of the United States of America, vol. 104, no. 19, pp. 7981-7986, 2007.
    • (2007) Proceedings of the National Academy of Sciences of the United States of America , vol.104 , Issue.19 , pp. 7981-7986
    • Cho, N.-H.1    Kim, H.-R.2    Lee, J.-H.3
  • 15
    • 34848903282 scopus 로고    scopus 로고
    • "Intracellular pathogens go extreme: Genome evolution in the rickettsiales"
    • A. C. Darby, N.-H. Cho, H.-H. Fuxelius, J. Westberg, and S. G. E. Andersson, "Intracellular pathogens go extreme: Genome evolution in the rickettsiales," Trends in Genetics, vol. 23, no. 10, pp. 511-520, 2007.
    • (2007) Trends in Genetics , vol.23 , Issue.10 , pp. 511-520
    • Darby, A.C.1    Cho, N.-H.2    Fuxelius, H.-H.3    Westberg, J.4    Andersson, S.G.E.5
  • 16
    • 0032512051 scopus 로고    scopus 로고
    • "The genome sequence of Rickettsia prowazekii and the origin of mitochondria"
    • S. G. E. Andersson, A. Zomorodipour, J. O. Andersson, et al., "The genome sequence of Rickettsia prowazekii and the origin of mitochondria," Nature, vol. 396, no. 6707, pp. 133-140, 1998.
    • (1998) Nature , vol.396 , Issue.6707 , pp. 133-140
    • Andersson, S.G.E.1    Zomorodipour, A.2    Andersson, J.O.3
  • 17
    • 33645760951 scopus 로고    scopus 로고
    • "Comparative genomics of emerging human ehrlichiosis agents"
    • J. C. Dunning Hotopp, M. Lin, R. Madupu, et al., "Comparative genomics of emerging human ehrlichiosis agents," PLoS Genetics, vol. 2, no. 2, p. e21, 2006.
    • (2006) PLoS Genetics , vol.2 , Issue.2
    • Dunning Hotopp, J.C.1    Lin, M.2    Madupu, R.3
  • 20
    • 0033956060 scopus 로고    scopus 로고
    • "The COG database: A tool for genome-scale analysis of protein functions and evolution"
    • R. L. Tatusov, M. Y. Galperin, D. A. Natale, and E. V. Koonin, "The COG database: A tool for genome-scale analysis of protein functions and evolution," Nucleic Acids Research, vol. 28, no. 1, pp. 33-36, 2000.
    • (2000) Nucleic Acids Research , vol.28 , Issue.1 , pp. 33-36
    • Tatusov, R.L.1    Galperin, M.Y.2    Natale, D.A.3    Koonin, E.V.4
  • 22
    • 0346494926 scopus 로고    scopus 로고
    • "TransportDB: A relational database of cellular membrane transport systems"
    • database issue
    • Q. Ren, K. H. Kang, and I. T. Paulsen, "TransportDB: A relational database of cellular membrane transport systems," Nucleic Acids Research, vol. 32, database issue, pp. D284-D288, 2004.
    • (2004) Nucleic Acids Research , vol.32
    • Ren, Q.1    Kang, K.H.2    Paulsen, I.T.3
  • 24
    • 33846040629 scopus 로고    scopus 로고
    • "TransportDB: A comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels"
    • database issue
    • Q. Ren, K. Chen, and I. T. Paulsen, "Transport DB: A comprehensive database resource for cytoplasmic membrane transport systems and outer membrane channels," Nucleic Acids Research, vol. 35, database issue, pp. D274-D279, 2007.
    • (2007) Nucleic Acids Research , vol.35
    • Ren, Q.1    Chen, K.2    Paulsen, I.T.3
  • 25
    • 1642581500 scopus 로고    scopus 로고
    • "ATP/ADP translocases: A common feature of obligate intracellular amoebal symbionts related to Chlamydiae and Rickettsiae"
    • S. Schmitz-Esser, N. Linka, A. Collingro, et al., "ATP/ADP translocases: A common feature of obligate intracellular amoebal symbionts related to Chlamydiae and Rickettsiae," Journal of Bacteriology, vol. 186, no. 3, pp. 683-691, 2004.
    • (2004) Journal of Bacteriology , vol.186 , Issue.3 , pp. 683-691
    • Schmitz-Esser, S.1    Linka, N.2    Collingro, A.3
  • 26
    • 33749030719 scopus 로고    scopus 로고
    • "Study of the five Rickettsia prowazekii proteins annotated as ATP/ADP translocases (Tlc): Only Tlc1 transports ATP/ADP, while Tlc4 and Tlc5 transport other ribonucleotides"
    • J. P. Audia and H. H. Winkler, "Study of the five Rickettsia prowazekii proteins annotated as ATP/ADP translocases (Tlc): Only Tlc1 transports ATP/ADP, while Tlc4 and Tlc5 transport other ribonucleotides," Journal of Bacteriology, vol. 188, no. 17, pp. 6261-6268, 2006.
    • (2006) Journal of Bacteriology , vol.188 , Issue.17 , pp. 6261-6268
    • Audia, J.P.1    Winkler, H.H.2
  • 28
    • 23944507559 scopus 로고    scopus 로고
    • "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite"
    • H. Ogata, P. Renesto, S. Audic, et al., "The genome sequence of Rickettsia felis identifies the first putative conjugative plasmid in an obligate intracellular parasite," PLoS Biology, vol. 3, no. 8, p. e248, 2005.
    • (2005) PLoS Biology , vol.3 , Issue.8
    • Ogata, H.1    Renesto, P.2    Audic, S.3
  • 29
    • 10344264978 scopus 로고    scopus 로고
    • "Metabolic interdependence of obligate intracellular bacteria and their insect hosts"
    • E. Zientz, T. Dandekar, and R. Gross, "Metabolic interdependence of obligate intracellular bacteria and their insect hosts," Microbiology and Molecular Biology Reviews, vol. 68, no. 4, pp. 745-770, 2004.
    • (2004) Microbiology and Molecular Biology Reviews , vol.68 , Issue.4 , pp. 745-770
    • Zientz, E.1    Dandekar, T.2    Gross, R.3
  • 30
    • 0017043386 scopus 로고
    • "Activation of long chain fatty acids with acyl carrier protein: Demonstration of a new enzyme, acyl-acyl carrier protein synthetase, in Escherichia coli"
    • T. K. Ray and J. E. Cronan Jr., "Activation of long chain fatty acids with acyl carrier protein: Demonstration of a new enzyme, acyl-acyl carrier protein synthetase, in Escherichia coli," Proceedings of the National Academy of Sciences of the United States of America, vol. 73, no. 12, pp. 4374-4378, 1976.
    • (1976) Proceedings of the National Academy of Sciences of the United States of America , vol.73 , Issue.12 , pp. 4374-4378
    • Ray, T.K.1    Cronan Jr., J.E.2
  • 31
    • 0023261610 scopus 로고
    • "Deficiency of peptidoglycan and lipopolysaccharide components in Rickettsia tsutsugamushi"
    • K.-I. Amano, A. Tamura, N. Ohashi, H. Urakami , S. Kaya, and K. Fukushi, "Deficiency of peptidoglycan and lipopolysaccharide components in Rickettsia tsutsugamushi," Infection and Immunity, vol. 55, no. 9, pp. 2290-2292, 1987.
    • (1987) Infection and Immunity , vol.55 , Issue.9 , pp. 2290-2292
    • Amano, K.-I.1    Tamura, A.2    Ohashi, N.3    Urakami, H.4    Kaya, S.5    Fukushi, K.6
  • 32
    • 14144250820 scopus 로고    scopus 로고
    • "Complete genome sequencing of Anaplasma marginale reveals that the surface is skewed to two superfamilies of outer membrane proteins"
    • K. A. Brayton, L. S. Kappmeyer, D. R. Herndon, et al., "Complete genome sequencing of Anaplasma marginale reveals that the surface is skewed to two superfamilies of outer membrane proteins," Proceedings of the National Academy of Sciences of the United States of America, vol. 102, no. 3, pp. 844-849, 2005.
    • (2005) Proceedings of the National Academy of Sciences of the United States of America , vol.102 , Issue.3 , pp. 844-849
    • Brayton, K.A.1    Kappmeyer, L.S.2    Herndon, D.R.3
  • 33
    • 29144477176 scopus 로고    scopus 로고
    • "Bacterial cell wall synthesis: New insights from localization studies"
    • D.-J. Scheffers and M. G. Pinho, "Bacterial cell wall synthesis: New insights from localization studies," Microbiology and Molecular Biology Reviews, vol. 69, no. 4, pp. 585-607, 2005.
    • (2005) Microbiology and Molecular Biology Reviews , vol.69 , Issue.4 , pp. 585-607
    • Scheffers, D.-J.1    Pinho, M.G.2
  • 35
    • 0021796921 scopus 로고
    • "Analysis of polypeptide composition and antigenic components of Rickettsia tsutsugamushi by polyacrylamide gel electrophoresis and immunoblotting"
    • A. Tamura, N. Ohashi, H. Urakami, K. Takahashi, and M. Oyanagi, "Analysis of polypeptide composition and antigenic components of Rickettsia tsutsugamushi by polyacrylamide gel electrophoresis and immunoblotting," Infection and Immunity, vol. 48, no. 3, pp. 671-675, 1985.
    • (1985) Infection and Immunity , vol.48 , Issue.3 , pp. 671-675
    • Tamura, A.1    Ohashi, N.2    Urakami, H.3    Takahashi, K.4    Oyanagi, M.5
  • 36
    • 4344580277 scopus 로고    scopus 로고
    • "Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae"
    • M. P. McLeod, X. Qin, S. E. Karpathy, et al., "Complete genome sequence of Rickettsia typhi and comparison with sequences of other Rickettsiae," Journal of Bacteriology, vol. 186, no. 17, pp. 5842-5855, 2004.
    • (2004) Journal of Bacteriology , vol.186 , Issue.17 , pp. 5842-5855
    • McLeod, M.P.1    Qin, X.2    Karpathy, S.E.3
  • 37
    • 0033859965 scopus 로고    scopus 로고
    • "Phylogenetic analysis of members of the genus Rickettsia using the gene encoding the outermembrane protein rOmpB (ompB)"
    • V. Roux and D. Raoult, "Phylogenetic analysis of members of the genus Rickettsia using the gene encoding the outermembrane protein rOmpB (ompB)," International Journal of Systematic and Evolutionary Microbiology, vol. 50, no. 4, pp. 1449-1455, 2000.
    • (2000) International Journal of Systematic and Evolutionary Microbiology , vol.50 , Issue.4 , pp. 1449-1455
    • Roux, V.1    Raoult, D.2
  • 38
    • 28944447801 scopus 로고    scopus 로고
    • "Ku70, a component of DNA-dependent protein kinase, is a mammalian receptor for Rickettsia conorii"
    • J. J. Martinez, S. Seveau, E. Veiga, S. Matsuyama, and P. Cossart, "Ku70, a component of DNA-dependent protein kinase, is a mammalian receptor for Rickettsia conorii," Cell, vol. 123, no. 6, pp. 1013-1023, 2005.
    • (2005) Cell , vol.123 , Issue.6 , pp. 1013-1023
    • Martinez, J.J.1    Seveau, S.2    Veiga, E.3    Matsuyama, S.4    Cossart, P.5
  • 39
    • 21144432943 scopus 로고    scopus 로고
    • "The Wolbachia genome of Brugia malayi: Endosymbiont evolution within a human pathogenic nematode"
    • J. Foster, M. Ganatra, I. Kamal, et al., "The Wolbachia genome of Brugia malayi: Endosymbiont evolution within a human pathogenic nematode," PLoS Biology, vol. 3, no. 4, p. e121, 2005.
    • (2005) PLoS Biology , vol.3 , Issue.4
    • Foster, J.1    Ganatra, M.2    Kamal, I.3
  • 40
    • 31344467158 scopus 로고    scopus 로고
    • "Wolbachia genomes: Revealing the biology of parasitism and mutualism"
    • K. Fenn and M. Blaxter, "Wolbachia genomes: Revealing the biology of parasitism and mutualism," Trends in Parasitology, vol. 22, no. 2, pp. 60-65, 2006.
    • (2006) Trends in Parasitology , vol.22 , Issue.2 , pp. 60-65
    • Fenn, K.1    Blaxter, M.2
  • 41
    • 9444254183 scopus 로고    scopus 로고
    • "The evolution of chronic infection strategies in the α-proteobacteria"
    • J. Batut, S. G. Andersson, and D. O'Callaghan, "The evolution of chronic infection strategies in the α-proteobacteria," Nature Reviews. Microbiology, vol. 2, no. 12, pp. 933-945, 2004.
    • (2004) Nature Reviews. Microbiology , vol.2 , Issue.12 , pp. 933-945
    • Batut, J.1    Andersson, S.G.2    O'Callaghan, D.3


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