메뉴 건너뛰기




Volumn 36, Issue 10, 2008, Pages 3235-3243

Structural analysis of the Sulfolobus solfataricus MCM protein N-terminal domain

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; DOUBLE STRANDED DNA; MINICHROMOSOME MAINTENANCE PROTEIN; SINGLE STRANDED DNA; ZINC; ARCHAEAL PROTEIN; BACTERIAL PROTEIN; DNA BINDING PROTEIN; HELICASE; PROTEIN SUBUNIT;

EID: 45549086385     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkn183     Document Type: Article
Times cited : (61)

References (43)
  • 1
    • 1542682737 scopus 로고    scopus 로고
    • Archeal DNA replication: Eukaryal proteins in a bacterial context
    • Grabowski,B. and Kelman,Z. (2003) Archeal DNA replication: Eukaryal proteins in a bacterial context. Annu. Rev. Microbiol., 57, 487-516.
    • (2003) Annu. Rev. Microbiol , vol.57 , pp. 487-516
    • Grabowski, B.1    Kelman, Z.2
  • 2
    • 1542405310 scopus 로고    scopus 로고
    • Eukaryotic MCM proteins: Beyond replication initiation
    • Forsburg,S.L. (2004) Eukaryotic MCM proteins: Beyond replication initiation. Microbiol. Mol. Biol. Rev., 68, 109-131.
    • (2004) Microbiol. Mol. Biol. Rev , vol.68 , pp. 109-131
    • Forsburg, S.L.1
  • 3
    • 33745041480 scopus 로고    scopus 로고
    • Evolutionary relationships and structural mechanisms of AAA+ proteins
    • Erzberger,J.P. and Berger,J.M. (2006) Evolutionary relationships and structural mechanisms of AAA+ proteins. Annu. Rev. Biophys. Biomol. Struct., 35, 93-114.
    • (2006) Annu. Rev. Biophys. Biomol. Struct , vol.35 , pp. 93-114
    • Erzberger, J.P.1    Berger, J.M.2
  • 4
    • 0032881250 scopus 로고    scopus 로고
    • MCM proteins in DNA replication
    • Tye,B.K. (1999) MCM proteins in DNA replication. Annu. Rev. Biochem. 68, 649-686.
    • (1999) Annu. Rev. Biochem , vol.68 , pp. 649-686
    • Tye, B.K.1
  • 5
    • 36349008252 scopus 로고    scopus 로고
    • Differences in the single-stranded DNA binding activities of MCM2-7 and MCM467: MCM2 and 5 define a slow ATP-dependent step
    • Bochman,M.L. and Schwacha,A. (2007) Differences in the single-stranded DNA binding activities of MCM2-7 and MCM467: MCM2 and 5 define a slow ATP-dependent step. J. Biol. Chem., 282, 33795-33804.
    • (2007) J. Biol. Chem , vol.282 , pp. 33795-33804
    • Bochman, M.L.1    Schwacha, A.2
  • 6
    • 0030859463 scopus 로고    scopus 로고
    • A DNA helicase activity is associated with an MCM4, -6, and -7 protein complex
    • Ishimi,Y. (1997) A DNA helicase activity is associated with an MCM4, -6, and -7 protein complex. J. Biol. Chem., 272, 24508-24513.
    • (1997) J. Biol. Chem , vol.272 , pp. 24508-24513
    • Ishimi, Y.1
  • 7
    • 0033593053 scopus 로고    scopus 로고
    • The single minichromosome maintenance protein of Methanobacterium thermoautotrophicum DeltaH contains DNA helicase activity
    • Kelman,Z., Lee,J.K. and Hurwitz,J. (1999) The single minichromosome maintenance protein of Methanobacterium thermoautotrophicum DeltaH contains DNA helicase activity. Proc. Natl Acad. Sci. USA, 96 14783-14788.
    • (1999) Proc. Natl Acad. Sci. USA , vol.96 , pp. 14783-14788
    • Kelman, Z.1    Lee, J.K.2    Hurwitz, J.3
  • 8
    • 0034652354 scopus 로고    scopus 로고
    • A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase
    • Chong,J.P., Hayashi,M.K., Simon,M.N, Xu,R.M. and Stillman,B. (2000) A double-hexamer archaeal minichromosome maintenance protein is an ATP-dependent DNA helicase. Proc. Natl Acad. Sci. USA, 97, 1530-1535.
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 1530-1535
    • Chong, J.P.1    Hayashi, M.K.2    Simon, M.N.3    Xu, R.M.4    Stillman, B.5
  • 9
    • 0037023748 scopus 로고    scopus 로고
    • Physical and functional interaction between the mini-chromosome maintenance-like DNA helicase and the single-stranded DNA binding protein from the crenarchaeon Sulfolobus solfataricus
    • Carpentieri,F., De Felice,M., De Falco,M., Rossi,M. and Pisani,F.M. (2002) Physical and functional interaction between the mini-chromosome maintenance-like DNA helicase and the single-stranded DNA binding protein from the crenarchaeon Sulfolobus solfataricus. J. Biol. Chem. 277, 12118-12127.
    • (2002) J. Biol. Chem , vol.277 , pp. 12118-12127
    • Carpentieri, F.1    De Felice, M.2    De Falco, M.3    Rossi, M.4    Pisani, F.M.5
  • 10
    • 0344012482 scopus 로고    scopus 로고
    • Biochemical analysis of components of the pre-replication complex of Archaeoglobus fulgidus
    • Grainge,I., Scaife,S. and Wigley,D.B. (2003) Biochemical analysis of components of the pre-replication complex of Archaeoglobus fulgidus. Nucleic Acids Res., 31, 4888-4898.
    • (2003) Nucleic Acids Res , vol.31 , pp. 4888-4898
    • Grainge, I.1    Scaife, S.2    Wigley, D.B.3
  • 11
    • 34548638261 scopus 로고    scopus 로고
    • Structure and mechanism of helicases and nucleic acid translocases
    • Singleton,M.R., Dillingham,M.S. and Wigley,D.B. (2007) Structure and mechanism of helicases and nucleic acid translocases. Annu. Rev. Biochem., 76, 23-50.
    • (2007) Annu. Rev. Biochem , vol.76 , pp. 23-50
    • Singleton, M.R.1    Dillingham, M.S.2    Wigley, D.B.3
  • 12
    • 0348133607 scopus 로고    scopus 로고
    • Hexameric ring structure of the full-length archaeal MCM protein complex
    • Pape,T., Meka,H., Chen,S., Vicentini,G., van Heel,M. and Onesti,S. (2003) Hexameric ring structure of the full-length archaeal MCM protein complex. EMBO Rep., 4, 1079-1083.
    • (2003) EMBO Rep , vol.4 , pp. 1079-1083
    • Pape, T.1    Meka, H.2    Chen, S.3    Vicentini, G.4    van Heel, M.5    Onesti, S.6
  • 14
    • 28844449554 scopus 로고    scopus 로고
    • Polymorphism and double hexamer structure in the archaeal minichromosome maintenance (MCM) helicase from Methanobacterium thermoautotrophicum
    • Gomez-Llorente,Y., Fletcher,R.J., Chen,X.S., Carazo,J.M. and San Martin,C. (2005) Polymorphism and double hexamer structure in the archaeal minichromosome maintenance (MCM) helicase from Methanobacterium thermoautotrophicum. J. Biol. Chem., 280, 40909-40915.
    • (2005) J. Biol. Chem , vol.280 , pp. 40909-40915
    • Gomez-Llorente, Y.1    Fletcher, R.J.2    Chen, X.S.3    Carazo, J.M.4    San Martin, C.5
  • 15
    • 33845648483 scopus 로고    scopus 로고
    • Structural basis of the Methanothermobacter thermautotrophicus MCM helicase activity
    • Costa,A., Pape,T., van Heel,M., Brick,P., Patwardhan,A. and Onesti,S. (2006) Structural basis of the Methanothermobacter thermautotrophicus MCM helicase activity. Nucleic Acids Res., 34, 5829-5838.
    • (2006) Nucleic Acids Res , vol.34 , pp. 5829-5838
    • Costa, A.1    Pape, T.2    van Heel, M.3    Brick, P.4    Patwardhan, A.5    Onesti, S.6
  • 18
    • 26944435616 scopus 로고    scopus 로고
    • Organization of the archaeal MCM complex on DNA and implications for the helicase mechanism
    • McGeoch,A.T., Trakselis,M.A., Laskey,R.A. and Bell,S.D. (2005) Organization of the archaeal MCM complex on DNA and implications for the helicase mechanism. Nat. Struct. Mol. Biol., 12, 756-762.
    • (2005) Nat. Struct. Mol. Biol , vol.12 , pp. 756-762
    • McGeoch, A.T.1    Trakselis, M.A.2    Laskey, R.A.3    Bell, S.D.4
  • 19
    • 10344252316 scopus 로고    scopus 로고
    • Amino acids of the Sulfolobus solfataricus mini-chromosome maintenance-like DNA helicase involved in DNA binding/remodeling
    • Pucci,B., De Felice,M., Rossi,M., Onesti,S. and Pisani,F.M. (2004) Amino acids of the Sulfolobus solfataricus mini-chromosome maintenance-like DNA helicase involved in DNA binding/remodeling. J. Biol. Chem., 279, 49222-49228.
    • (2004) J. Biol. Chem , vol.279 , pp. 49222-49228
    • Pucci, B.1    De Felice, M.2    Rossi, M.3    Onesti, S.4    Pisani, F.M.5
  • 20
    • 35348971984 scopus 로고    scopus 로고
    • ATPase site architecture and helicase mechanism of an archaeal MCM
    • Moreau,M.J., McGeoch,A.T., Lowe,A.R., Itzhaki,L.S. and Bell,S.D. (2007) ATPase site architecture and helicase mechanism of an archaeal MCM. Mol. Cell., 28, 304-314.
    • (2007) Mol. Cell , vol.28 , pp. 304-314
    • Moreau, M.J.1    McGeoch, A.T.2    Lowe, A.R.3    Itzhaki, L.S.4    Bell, S.D.5
  • 21
    • 33847376397 scopus 로고    scopus 로고
    • Archaeal MCM has separable processivity, substrate choice and helicase domains
    • Barry,E.R., McGeoch,A.T., Kelman,Z. and Bell,S.D. (2007) Archaeal MCM has separable processivity, substrate choice and helicase domains. Nucleic Acids Res., 35, 988-998.
    • (2007) Nucleic Acids Res , vol.35 , pp. 988-998
    • Barry, E.R.1    McGeoch, A.T.2    Kelman, Z.3    Bell, S.D.4
  • 25
    • 13444254300 scopus 로고    scopus 로고
    • PDBsum more: New summaries and analyses of the known 3D structures of proteins and nucleic acids
    • Laskowski,R.A., Chistyakov,V.V. and Thornton,J.M. (2005) PDBsum more: new summaries and analyses of the known 3D structures of proteins and nucleic acids. Nucleic Acids Res., 33, D266-D268.
    • (2005) Nucleic Acids Res , vol.33
    • Laskowski, R.A.1    Chistyakov, V.V.2    Thornton, J.M.3
  • 28
    • 0035965990 scopus 로고    scopus 로고
    • The zinc finger domain of the archaeal minichromosome maintenance protein is required for helicase activity
    • Poplawski,A., Grabowski,B., Long,S.E. and Kelman,Z. (2001) The zinc finger domain of the archaeal minichromosome maintenance protein is required for helicase activity. J. Biol. Chem., 276, 49371-49377.
    • (2001) J. Biol. Chem , vol.276 , pp. 49371-49377
    • Poplawski, A.1    Grabowski, B.2    Long, S.E.3    Kelman, Z.4
  • 29
    • 0037439997 scopus 로고    scopus 로고
    • Structural classification of zinc fingers: Survey and summary
    • Krishna,S.S., Majumdar,I. and Grishin,N.V. (2003) Structural classification of zinc fingers: Survey and summary. Nucleic Acids Res., 31, 532-550.
    • (2003) Nucleic Acids Res , vol.31 , pp. 532-550
    • Krishna, S.S.1    Majumdar, I.2    Grishin, N.V.3
  • 30
    • 3142782839 scopus 로고    scopus 로고
    • Thermotoga maritima-Escherichia coli chimeric topoisomerases. Answers about involvement of the carboxyl-terminal domain in DNA topoisomerase I-mediated catalysis
    • Viard,T., Cossard,R., Duguet,M. and de La Tour,C.B. (2004) Thermotoga maritima-Escherichia coli chimeric topoisomerases. Answers about involvement of the carboxyl-terminal domain in DNA topoisomerase I-mediated catalysis. J. Biol. Chem., 279, 30073-30080.
    • (2004) J. Biol. Chem , vol.279 , pp. 30073-30080
    • Viard, T.1    Cossard, R.2    Duguet, M.3    de La Tour, C.B.4
  • 31
    • 1642411843 scopus 로고    scopus 로고
    • A nonconserved surface of the TFIIB zinc ribbon domain plays a direct role in RNA polymerase II recruitment
    • Tubon,T.C., Tansey,W.P. and Herr,W. (2004) A nonconserved surface of the TFIIB zinc ribbon domain plays a direct role in RNA polymerase II recruitment. Mol. Cell. Biol., 24, 2863-2874.
    • (2004) Mol. Cell. Biol , vol.24 , pp. 2863-2874
    • Tubon, T.C.1    Tansey, W.P.2    Herr, W.3
  • 32
    • 3142618515 scopus 로고    scopus 로고
    • Biochemical characterization of the Methanothermobacter thermautotrophicus minichromosome maintenance (MCM) helicase N-terminal domains
    • Kasiviswanathan,R., Shin,J.H., Melamud,E. and Kelman,Z. (2004) Biochemical characterization of the Methanothermobacter thermautotrophicus minichromosome maintenance (MCM) helicase N-terminal domains. J. Biol. Chem., 279, 28358-28366.
    • (2004) J. Biol. Chem , vol.279 , pp. 28358-28366
    • Kasiviswanathan, R.1    Shin, J.H.2    Melamud, E.3    Kelman, Z.4
  • 33
    • 29644436609 scopus 로고    scopus 로고
    • Double hexamer disruption and biochemical activities of Methanobacterium thermoautotrophicum MCM
    • Fietcher,R.J., Shen,J., Gomez-Llorente,Y., Martin,C.S., Carazo,J.M. and Chen,X.S. (2005) Double hexamer disruption and biochemical activities of Methanobacterium thermoautotrophicum MCM. J. Biol. Chem., 280 42405-42410.
    • (2005) J. Biol. Chem , vol.280 , pp. 42405-42410
    • Fietcher, R.J.1    Shen, J.2    Gomez-Llorente, Y.3    Martin, C.S.4    Carazo, J.M.5    Chen, X.S.6
  • 34
    • 22744445013 scopus 로고    scopus 로고
    • Pumps, paradoxes and ploughshares: Mechanism of the MCM2-7 DNA helicase
    • Takahashi,T.S., Wigley,D.B. and Walter,J.C. (2005) Pumps, paradoxes and ploughshares: Mechanism of the MCM2-7 DNA helicase. Trends Biochem. Sci., 30, 437-444.
    • (2005) Trends Biochem. Sci , vol.30 , pp. 437-444
    • Takahashi, T.S.1    Wigley, D.B.2    Walter, J.C.3
  • 35
    • 0037219192 scopus 로고    scopus 로고
    • A rotary pumping model for helicase function of MCM proteins at a distance from replication forks
    • Laskey,R.A. and Madine,M.A. (2003) A rotary pumping model for helicase function of MCM proteins at a distance from replication forks. EMBO Rep., 4, 26-30.
    • (2003) EMBO Rep , vol.4 , pp. 26-30
    • Laskey, R.A.1    Madine, M.A.2
  • 36
    • 4444347924 scopus 로고    scopus 로고
    • Two heads are better than one: Regulation of DNA replication by hexameric helicases
    • Sclafani,R.A., Fletcher,R.J. and Chen,X.S. (2004) Two heads are better than one: Regulation of DNA replication by hexameric helicases. Genes Dev., 18, 2039-2045.
    • (2004) Genes Dev , vol.18 , pp. 2039-2045
    • Sclafani, R.A.1    Fletcher, R.J.2    Chen, X.S.3
  • 38
    • 20044380796 scopus 로고    scopus 로고
    • DNA binding and helicase actions of mouse MCM4/6/7 helicase
    • You,Z. and Masai,H. (2005) DNA binding and helicase actions of mouse MCM4/6/7 helicase. Nucleic Acids Res., 33, 3033-3047.
    • (2005) Nucleic Acids Res , vol.33 , pp. 3033-3047
    • You, Z.1    Masai, H.2
  • 39
    • 33646754407 scopus 로고    scopus 로고
    • Minichromosome maintenance helicase activity is controlled by N- and C-teminal motifs and requires the ATPase domain helix-2 insert
    • Jenkinson,E.R. and Chong,J.P. (2006) Minichromosome maintenance helicase activity is controlled by N- and C-teminal motifs and requires the ATPase domain helix-2 insert. Proc. Natl Acad. Sci. USA, 103 7613-7618.
    • (2006) Proc. Natl Acad. Sci. USA , vol.103 , pp. 7613-7618
    • Jenkinson, E.R.1    Chong, J.P.2
  • 40
    • 4143151757 scopus 로고    scopus 로고
    • Twin DNA pumps of a hexameric helicase provide power to simultaneously melt two duplexes
    • Kaplan,D.L. and O'Donnell,M. (2004) Twin DNA pumps of a hexameric helicase provide power to simultaneously melt two duplexes. Mol. Cell., 15, 453-465.
    • (2004) Mol. Cell , vol.15 , pp. 453-465
    • Kaplan, D.L.1    O'Donnell, M.2
  • 41
    • 0029039925 scopus 로고
    • Bacteriophage T7 helicase/primase proteins form rings around single-stranded DNA that suggest a general structure for hexameric helicases
    • Egelman,E.H., Yu,X., Wild,R., Hingorani,M.M. and Patel,S.S. (1995) Bacteriophage T7 helicase/primase proteins form rings around single-stranded DNA that suggest a general structure for hexameric helicases. Proc. Natl Acad. Sci. USA, 92, 3869-3873.
    • (1995) Proc. Natl Acad. Sci. USA , vol.92 , pp. 3869-3873
    • Egelman, E.H.1    Yu, X.2    Wild, R.3    Hingorani, M.M.4    Patel, S.S.5
  • 42
    • 33746375404 scopus 로고    scopus 로고
    • Mechanism of DNA translocation in a replicative hexameric helicase
    • Enemark,E.J. and Joshua-Tor,L. (2006) Mechanism of DNA translocation in a replicative hexameric helicase. Nature, 442, 270-275.
    • (2006) Nature , vol.442 , pp. 270-275
    • Enemark, E.J.1    Joshua-Tor, L.2
  • 43
    • 36348987861 scopus 로고    scopus 로고
    • MCM forked substrate specificity involves dynamic interaction with the 5′-tail
    • Rothenberg,E., Trakselis,M.A., Bell,S.D. and Ha,T. (2007) MCM forked substrate specificity involves dynamic interaction with the 5′-tail. J. Biol. Chem., 282, 34229-34234.
    • (2007) J. Biol. Chem , vol.282 , pp. 34229-34234
    • Rothenberg, E.1    Trakselis, M.A.2    Bell, S.D.3    Ha, T.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.