Case-control study of binary disease trait considering interactions between SNPs and environmental effects using logistic regression

Proceedings - Fourth IEEE Symposium on Bioinformatics and Bioengineering, BIBE 2004

Volumn , Issue , 2004, Pages 73-78

  Nakamichi, Reiichiro ^a   Imoto, Seiya ^a   Miyano, Satoru ^a  

^a UNIVERSITY OF TOKYO   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BINARY DISEASE; CASE-CONTROL STUDY; LOGISTIC REGRESSION; SINGLE LOCUS POLYMORPHISM (SNP);

ENVIRONMENTAL IMPACT; GENES; GENETIC ALGORITHMS; INFORMATION RETRIEVAL; PATIENT TREATMENT; REGRESSION ANALYSIS; VARIATIONAL TECHNIQUES;

DISEASES;

EID: 4544295413     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1109/BIBE.2004.1317327     Document Type: Conference Paper

References (14)

1. H. Akaike, Information theory and an extension of the maximum likelihood principle. Proc. 2nd Inter. Symp. on Information Theory (Petrov, B.N. and Csaki, F. eds.), Akademlal Kiado, Budapest, 267-281, 1973.
2. H. Akaike, A new look at the statistical model Identification. IEEE Trans. Autom. Contr. AC-19:716-723, 1974.
3. I.C. Gray, D.A. Campbell, and N.K. Spun, Single nucleotide polymorphisms as tools in human genetics. Hum. Mol. Genet. 9:2403-2408, 2000.
4. K. Hao, X. Xu, N. Laird, X. Wang, and X. Xu, Power estimation of multiple SNP association test of case-control study and application. Genetic Epidemiology 26:22-30, 2004
5. E.S. Lander, and N. Schork, Genetic dissection of complex traits. Science 265:2037-2048, 1994
6. P. McCullagh, and J.A. Nelder, Generalized Linear Models, 2nd ed. Chapman and Hall/CRC, London, 1989.
7. M.R. Nelson, S.L.R. Kardia, R.E. Ferrell, and C.F. Sing, A combinatorial partitioning method to identify multilocus genotypic partitions that predict quantitative trait variation. Genome Research 11:458-470, 2001.
8. N. Risch, and K. Merikangas, The future of genetic studies of complex human diseases. Science 273:1516-1517, 1996.
9. R.J. Sigal, A. Doria, J.H. Warram, and A.S Krolewski, Codon 972 polymorphism in the insulin-receptor-substrate-1 gene, obesity, and risk of non-insulin-dependent diabetes mellitus. J. Clin. Endocrinol. Metab. 81:1657-1659, 1996.
10. R.S. Spielman, R.E. McGinnis, and W.J. Ewens, Transmission test for linkage disequilibrium: the insulin gene region and insulin-dependent diabetes mellitus (IDDM). Am. J. Hum. Genet. 52:506-513, 1993.
11. R.S. Spielman, and W.J. Ewens, The TDT and other family-based tests for linkage disequilibrium and association. Am. J. Hum. Genet. 59:983-989, 1996.
12. A. Wille, J. Hoh, and J. Ott, Sum statistics for the joint detection of multiple disease loci in case-control association studies with SNP markers. Genetic Epidemiology 25:350-359, 2003.
13. H. Zhang, and G. Bonney, Use of classification trees for association studies. Genetic Epidemiology 19:323-332, 2000.
14. http://www.giib.or.jp/mtsnp/index_e.html