The fate of a genetically modified Pseudomonas strain and its transgene during the composting of poultry manure

Canadian Journal of Microbiology

Volumn 50, Issue 6, 2004, Pages 415-421

  Guan, J ^a   Spencer, J L ^a   Sampath, M ^a   Devenish, J ^a  

^a CANADIAN FOOD INSPECTION AGENCY   (Canada)

Author keywords

Composting; Genetically modified Pseudomonas strain; Polymerase chain reaction; Transgene

Indexed keywords

BACTERIA; COMPOSTING; DEGRADATION; GENES; MANURES; SOILS;

INCUBATION; ORGANIC WASTES; POLYMERASE CHAIN REACTION;

MICROBIOLOGY;

BACTERIUM; COMPOSTING; ENVIRONMENTAL FATE; GENETICALLY MODIFIED ORGANISM; MANURE;

ARTICLE; BACTERIAL GENETICS; CHICKEN; COMPOST; CONTROLLED STUDY; GENE IDENTIFICATION; GENE INSERTION; MANURE; NONHUMAN; POLYMERASE CHAIN REACTION; POULTRY; PRIORITY JOURNAL; PSEUDOMONAS; PSEUDOMONAS CHLORORAPHIS; SOIL ANALYSIS; TEMPERATURE MEASUREMENT; TRANSGENE;

ANIMALS; BIOREACTORS; MANURE; ORGANISMS, GENETICALLY MODIFIED; POULTRY; PSEUDOMONAS; SOIL MICROBIOLOGY; TEMPERATURE; TIME FACTORS; TRANSGENES;

BACTERIA (MICROORGANISMS); GALLUS GALLUS; INSERTION SEQUENCES; NEGIBACTERIA; PSEUDOMONAS; PSEUDOMONAS CHLORORAPHIS;

EID: 4544288615     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/w04-030     Document Type: Article

References (29)

1. Barry, G.F. 1986. Permanent insertion of foreign genes into the chromosome of soil bacteria. Bio/Technology, 4: 446-449.
2. Barry, G.F. 1988. A broad host-range shuttle system for gene insertion into the chromosome of Gram-negative bacteria. Gene, 71: 75-84.
3. Báscones, E., Imperial, J., Ruiz-Argüeso, T., and Palacios, J. M. 2000. Generation of new hydrogen-recycling Rhizobiaceae strains by introduction of a novel hup minitransposon. Appl. Environ. Microbiol. 66: 4292-4299.
4. Bollen, G.J. 1985a. Lethal temperatures of soil fungi. In Ecology and management of soil-borne plant pathogen. Edited by C.A. Parker, A.D. Rovira, K.J. Moore, and P.T.W. Wong. APS, St. Paul, Minn. pp. 191-193.
5. Bollen, G.J. 1985e. The fate of plant pathogens during composting of crop residues. In Composting of agricultural and other wastes. Edited by J.K.R. Gasser. Elsevier Science, London, pp. 282-290.
6. Castillo, M., Flores, M., Mavingui, P., Martínez-Romero, E., Palacios, R., and Hernández, G. 1999. Increase in alfalfa nodulation, nitrogen fixation, and plant growth by specific DNA amplification in Sinorhizobium meliloti. Appl. Environ. Microbiol. 65: 2716-2722.
7. Cullen, D.W., Nicholson, P.S., Mendum, T.A., and Hirsch, P.R. 1998. Monitoring genetically modified rhizobia in field soils using the polymerase chain reaction. J. Appl. Microbiol. 84: 1025-1034.
8. Demanéche, S., Jocteur-Monrozier, L., Quiquampoix, H., and Simonet, P. 2001. Evaluation of biological and physical protection against nuclease degradation to clay-bound plasmid DNA. Appl. Environ. Microbiol. 67: 293-299.
9. England, L.S., Lee, H., and Trevors, J.T. 1997. Persistence of Pseudomonas aureofaciens strains and DNA in soil. Soil. Biol. Biochem. 29: 1521-1527.
10. Farran, S.K. 1992. Conjugal gene transfer on plants. In Microbial ecology: principles, methods and application. Edited by M.A. Levin, R.J. Sedler, and M. Rogul. McGraw Hill, New York. pp. 345-362.
11. Gagliadi, J.V., Angle, J.S., Germida, J.J., Wyndham, R.C., Chanway, C.P., Watson, R.J., Greer, C.W., McIntyre, T., Yu, H.H., Levin, M.A., Russek-Cohen, E., Rosolen, S., Nairn, J., Seib, A., Matin-Heller, T., and Wisse, G. 2001. Intact soil-core microcosms compared with muti-site field releases for pre-release testing of microbes in diverse soils and climate. Can. J. Microbiol. 47: 237-252.
12. Gebhard, F., and Smalla, K. 1999. Monitoring field releases of genetically modified sugar beets for persistence of transgenic plant DNA and horizontal gene transfer. FEMS Microbiol. Ecol. 28: 261-272.
13. Lung, A.J., Kim, C.-M., Marshall, M.R., Nordstedt, R., Thompson, N.P., and Wei, C.I. 2001. Destruction of Escherichia coli 0157:H7 and Salmonella enteritidis in cow manure composting. J. Food Prot. 64: 1309-1314.
14. Mathur, S.P., Dine, H., Owen, G., Schnitzer, M., and Dugan, J. 1993. Determination of compost biomaturity II. Optical density of water extracts of compost as a reflection of their maturity. Biol. Agri. Hort. 10: 87-108.
15. Netherwood, T., Bowden, R., Harrison, P., O'Donnell, A.G., Parker, D.S., and Gilbert, H.J. 1999. Gene transfer in the gastrointestinal tract. Appl. Environ. Microbiol. 65: 5139-5141.
16. Nielsen, K.M., Smalla, K., and Van Elsas, J.D. 2000. Natural transformation of Acinetobacter sp. strain BD413 with cell lysates of Acinetobacter sp., Pseudomonas fluorescens, and Burkholderia cepacia in soil microcosms. Appl. Environ. Microbiol. 66: 206-212.
17. Noordover, J.A.C., Hofmeester, J.J.M., van der Burg, J.P., de Leeuw, A., van Dijck, P.W.M., Luiten, R.G.M., and Groot, G.S.P. 2002. Containment in industrial biotechnology within wastewater treatment plants. J. Ind. Microbiol. Biotech. 28: 65-69.
18. Paget, E., Lebrun, M., Freyssinet, G., and Simonet, P. 1998. The fate of recombinant plant DNA in soil. Eur. J. Soil Biol. 34: 81-88.
19. Ranalli, G., Bottura, G., Taddei, P., Garavani, M., Marchetti, R., and Sorlini, C. 2001. Composting of solid and sludge residues from agricultural and food industries. Bioindicators of monitoring and compost maturity. J. Environ. Sci. Health, A36: 415-436.
20. Rattan, K., Shanker, R., Khanna, P., and Atkins, W.M. 1999. Stress survival of a genetically engineered Pseudomonas in soil slurries: cytochrome P-450cam-catalyzed dehalogenation of chlorinated hydrocarbons. Biotechnol. Prog. 15: 958-962.
21. Ravatn, R., Zehnder, A.J.B., and van der Meer, J.R. 1998. Low-frequency horizontal transfer of an element containing the chlorocatechol degradation genes from Pseudomonas sp. Strain B13 to Pseudomonas putida F1 to indigenous bacteria in laboratory-scale activated-sludge microcosms. Appl. Environ. Microbiol. 64: 2162-2132.
22. Romamowski, G., Lorenz, M.G., Sayler, G., and Wackernagel, W. 1992. Persistence of free plasmid DNA in soil monitored by various methods, including a transformation assay. Appl. Environ. Microbiol. 58: 3012-3019.
23. Sartaj, M., Fernandes, L., and Patni, N.K. 1995. Influence zone of aeration pipes and temperature variations in passively aerated composting of manure slurries. Trans. ASAE, 38: 1835-1841.
24. Schwieger, F., and Tebbe, C.C. 1998. A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA gene-based microbial community analysis. Appl. Environ. Microbiol. 64. 4870-4876.
25. Smalla, K., Krogerrechlenfort, E., Heuer, H., Dejonghe, W., Top, E., Osborn, M., Niewint, J., Tebbe, C., Barr, M., Bailey, M., Greated, A., Thomas, C., Turner, S., Young, P., Nikoakopoulou, D., Karagouni, A., Wolters, A., Elsas, J.D.V., Dronen, K., Sandaa, R., Borin, S., Brabhu, J., Grohmannn, E., and Sobecky, P. 2000. PCR-based detection of mobile genetic elements in total community DNA. Microbiology, 146: 1256-1257.
26. Stotzky, G., and Babich, H. 1994. Fate of genetically engineered microbes in natural environments. Recomb. DNA Technol. Bull. 7: 163-188.
27. Doblhoff-Dier, O., Bachmayer, H., Bennett, A., Brunius, G., Burki, K., Cantley, M., Collins, C., Crooy, P., Elmqvist, A., Frontali-Botti, C., Havenaar, R., Haymerle, H., Lelieveld, H., Lex, M., Mahler, J.L., Martinez, L., Mosgaard, C., Olsen, L., Pazlarova, J., Rudan, F., Sarvas, M., Stepankova, H., Tzotzos, G., Wagner, K., Werner, R. 1999. Safe biotechnology 9: values in risk assessment for the environmental application of microorganisms. The Safety in Biotechnology Working Party of the European Federation of Biotechnology. Trends Biotechnol. 17: 307-311.
28. Tiquia, S.M., Wan, J.H.C., and Tam N.F.Y. 2002. Microbial population dynamics and enzyme activities during composting. Compost Sci. Utilization, 10: 150-161.
29. Zhou, J., Bruns, M.A., and Tiedje, J.M. 1996. DNA recovery from soils of diverse composition. Appl. Environ. Microbiol. 62: 316-322.