The crystal structure of ribosomal chaperone trigger factor from Vibrio cholerae

Proceedings of the National Academy of Sciences of the United States of America

Volumn 101, Issue 37, 2004, Pages 13436-13441

  Ludlam, Anthony V ^a   Moore, Brian A ^a   Xu, Zhaohui ^a  

^a UNIVERSITY OF MICHIGAN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYME;

AMINO TERMINAL SEQUENCE; ARTICLE; BINDING AFFINITY; CARBOXY TERMINAL SEQUENCE; CRYSTAL STRUCTURE; ENZYME ACTIVITY; MOLECULE; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; RIBOSOME; VIBRIO CHOLERAE; X RAY CRYSTALLOGRAPHY;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BINDING SITES; CRYSTALLOGRAPHY, X-RAY; DIMERIZATION; MODELS, MOLECULAR; MOLECULAR CHAPERONES; MOLECULAR SEQUENCE DATA; PEPTIDYLPROLYL ISOMERASE; PROTEIN BINDING; PROTEIN STRUCTURE, QUATERNARY; PROTEIN STRUCTURE, TERTIARY; RIBOSOMES; SEQUENCE ALIGNMENT; VIBRIO CHOLERAE;

BACTERIA (MICROORGANISMS); NEGIBACTERIA; VIBRIO; VIBRIO CHOLERAE;

EID: 4544245760     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0405868101     Document Type: Article

References (45)

1. Hartl, F. U. & Hayer-Hartl, M. (2002) Science 295, 1852-1858.
2. Bukau, B., Deuerling, E., Pfund, C. & Craig, E. A. (2000) Cell 101, 119-122.
3. Lecker, S., Lill, R., Ziegelhoffer, T., Georgopoulos, C., Bassford, P. J., Jr., Kumamoto, C. A. & Wickner, W. (1989) EMBO J. 8, 2703-2709.
4. Hesterkamp, T., Hauser, S., Lutcke, H. & Bukau, B. (1996) Proc. Natl. Acad. Sci. USA 93, 4437-4441.
5. Huang, G. C., Li, Z. Y., Zhou, J. M. & Fischer, G. (2000) Protein Sci. 9, 1254-1261.
6. Stoller, G., Rucknagel, K. P., Nierhaus, K. H., Schmid, F. X., Fischer, G. & Rahfeld, J. U. (1995) EMBO J. 14, 4939-4948.
7. Maier, R., Eckert, B., Scholz, C., Lilie, H. & Schmid, F. X. (2003) J. Mol. Biol. 326, 585-592.
8. Kramer, G., Rauch, T., Rist, W., Vorderwulbecke, S., Patzelt, H., Schulze-Specking, A., Ban, N., Deuerling, E. & Bukau, B. (2002) Nature 419, 171-174.
9. Ban, N., Nissen, P., Hansen, J., Moore, P. B. & Steitz, T. A. (2000) Science 289, 905-920.
10. Hesterkamp, T. & Bukau, B. (1996) FEBS Lett. 385, 67-71.
11. Scholz, C., Stoller, G., Zarnt, T., Fischer, G. & Schmid, F. X. (1997) EMBO J. 16, 54-58.
12. Deuerling, E., Patzelt, H., Vorderwulbecke, S., Rauch, T., Kramer, G., Schaffitzel, E., Mogk, A., Schulze-Specking, A., Langen, H. & Bukau, B. (2003) Mol. Microbiol. 47, 1317-1328.
13. Deuerling, E., Schulze-Specking, A., Tomoyasu, T., Mogk, A. & Bukau, B. (1999) Nature 400, 693-696.
14. Teter, S. A., Houry, W. A., Ang, D., Tradler, T., Rockabrand, D., Fischer, G., Blum, P., Georgopoulos, C. & Hartl, F. U. (1999) Cell 97, 755-765.
15. Schaffitzel, E., Rudiger, S., Bukau, B. & Deuerling, E. (2001) Biol. Chem. 382, 1235-1243.
16. Vorderwulbecke, S., Kramer, G., Merz, F., Kurz, T. A., Rauch, T., Zachmann-Brand, B., Bukau, B. & Deuerling, E. (2004) FEBS Lett. 559, 181-187.
17. Gothel, S. F., Scholz, C., Schmid, F. X. & Marahiel, M. A. (1998) Biochemistry 37, 13392-13399.
18. Lyon, W. R., Gibson, C. M. & Caparon, M. G. (1998) EMBO J. 17, 6263-6275.
19. Zarnt, T. Tradler, T., Stoller, G., Scholz, C., Schmid, F. X. & Fischer, G. (1997) J. Mol. Biol. 271, 827-837.
20. Hesterkamp, T., Deuerling, E. & Bukau, B. (1997) J. Biol. Chem. 272, 21865-21871.
21. Stoller, G., Tradier, T., Rucknagel, K. P., Rahfeld, J. U. & Fischer, G. (1996) FEBS Lett. 384, 117-122.
22. Callebaut, I. & Mornon, J. P. (1995) FEBS Lett. 374, 211-215.
23. Tradier, T., Stoller, G., Rucknagel, K. P., Schierhorn, A., Rahfeld, J. U. & Fischer, G. (1997) FEBS Lett. 407, 184-190.
24. Scholz, C. Mucke, M., Rape, M., Recht, A. Pahl, A., Bang, H. & Schmid, F. X. (1998) J. Mol. Biol. 277, 723-732.
25. Kramer, G., Patzelt, H., Rauch, T., Kurz, T. A., Vorderwulbecke, S., Bukau, B. & Deuerling, E. (2004) J. Biol. Chem. 279, 14165-14170.
26. Li, Z. Y., Liu, C. P., Zhu, L. Q., Jing, G. Z. & Zhou, J. M. (2001) FEBS Lett. 506, 108-112.
27. Maier, R., Scholz, C. & Schmid, F. X. (2001) J. Mol. Biol. 314, J181-1190.
28. Kristensen, O. & Gajhede, M. (2003) Structure (London) 11, 1547-1556.
29. Vogtherr, M., Jacobs, D. M., Parac, T. N., Maurer, M., Pahl, A., Saxena, K., Ruterjans, H., Griesinger, C. & Fiebig, K. M. (2002) J. Mol. Biol. 318, 1097-1115.
30. Patzelt, H., Kramer, G., Rauch, T., Schonfeld, H. J., Bukau, B. & Deuerling, E. (2002) Biol. Chem. 383, 1611-1619.
31. Pflugrath, J. W. (1999) Acta Crystallogr. D Biol. Crystallogr 55, Part 10, 1718-1725.
32. Hendrickson, W. A. & Ogata, C. M. (1997) Methods Enzymol. 276, 494-523.
33. Fortelle, E. d. L. & Bricogne, G. (1998) Methods Enzymol. 276, 472-494.
34. Jones, T. A., Zou, J. Y., Cowan, S. W. & Kjeldgaard. (1991) Acta Crystallogr. A 47, Part 2, 110-119.
35. Brunger, A. T., Adams, P. D., Clore, G. M., Delano, W. L., Gros, P., Grosse-Kunstleve, R. W., Jiang, J.-S., Kuszewski, J., Nilges, N., Pannu, N. S., et al. (1998) Acta Crystallogr. D 54, 905-921.
36. Van Duyne, G. D., Standaert, R. F., Karplus, P. A., Schreiber, S. L. & Clardy, J. (1993) J. Mol. Biol. 229, 105-124.
37. Van Duyne, G. D., Standaert, R. F., Karplus, P. A., Schreiber, S. L. & Clardy, J. (1991) Science 252, 839-842.
38. Schiene-Fischer, C., Habazettl, J., Tradier, T. & Fischer, G. (2002) Biol. Chem. 383, 1865-1873.
39. Lyon, W. R. & Caparon, M. G. (2003) J. Bacteriol. 185, 3661-3667.
40. Janin, J. & Chothia, C. (1990) J. Biol. Chem. 265, 16027-16030.
41. Patzelt, H., Rudiger, S., Brehmer, D., Kramer, G., Vorderwulbecke, S., Schaffitzel, E., Waitz, A., Hesterkamp, T., Dong, L., Schneider-Mergener, J., et al. (2001) Proc. Natl. Acad. Sci. USA 98, 14244-142449.
42. Agashe, V. R., Guha, S., Chang, H. C., Genevaux, P., Hayer-Hartl, M., Stemp, M., Georgopoulos, C., Hartl, F. U. & Barral, J. M. (2004) Cell 117, 199-209.
43. Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994) Nucleic Acids Res. 22, 4673-4680.
44. Carson, M. (1997) Methods Enzymol. 277, 493-505.
45. Nicholls, A., Sharp, K. A. & Honig, B. (1991) Proteins 11, 281-296.