-
2
-
-
0031060779
-
'Lotka-Volterra representation of general nonlinear systems'
-
0025-5564
-
Hernández-Bermejo, B., and Fairén, V.: 'Lotka-Volterra representation of general nonlinear systems', Math. Biosci., 1009, 140, p. 1-32 0025-5564
-
(1009)
Math. Biosci.
, vol.140
, pp. 1-32
-
-
Hernández-Bermejo, B.1
Fairén, V.2
-
3
-
-
0014649230
-
'Biochemical systems analysis. I. Some mathematical properties of the rate law for the component enzymatic reactions'
-
Savageau, M.A.: 'Biochemical systems analysis. I. Some mathematical properties of the rate law for the component enzymatic reactions', J. Theor. Biol., 1969, 25, p. 365-369
-
(1969)
J. Theor. Biol.
, vol.25
, pp. 365-369
-
-
Savageau, M.A.1
-
4
-
-
0014658880
-
'Biochemical systems analysis. II. The steady-state solutions for an n-pool system using a power law approximation'
-
Savageau, M.A.: 'Biochemical systems analysis. II. The steady-state solutions for an n-pool system using a power law approximation', J. Theor. Biol., 1969, 25, p. 370-379
-
(1969)
J. Theor. Biol.
, vol.25
, pp. 370-379
-
-
Savageau, M.A.1
-
8
-
-
0030574106
-
'MCA has more to say'
-
Hatzimanikatis, V., and Bailey, J.: 'MCA has more to say', J. Theor. Biol., 1996, 182, p. 233-242
-
(1996)
J. Theor. Biol.
, vol.182
, pp. 233-242
-
-
Hatzimanikatis, V.1
Bailey, J.2
-
9
-
-
0141684666
-
'Dynamic simulation and metabolic re-design of a branched pathway using linlog kinetics'
-
Visser, D., and Heijnen, J.J.: 'Dynamic simulation and metabolic re-design of a branched pathway using linlog kinetics', Metab. Eng., 2003, 5, p. 164-176
-
(2003)
Metab. Eng.
, vol.5
, pp. 164-176
-
-
Visser, D.1
Heijnen, J.J.2
-
10
-
-
25144492110
-
'Approximative kinetic formats used in metabolic network'
-
Heijnen, J.J.: 'Approximative kinetic formats used in metabolic network', Biotechnol. Bioeng., 2005, 91, p. 534-545
-
(2005)
Biotechnol. Bioeng.
, vol.91
, pp. 534-545
-
-
Heijnen, J.J.1
-
11
-
-
0031853923
-
'Development of fractal kinetic theory for enzyme-catalyzed reactions and implications for the design of biochemical pathways'
-
Savageau, M.A.: 'Development of fractal kinetic theory for enzyme-catalyzed reactions and implications for the design of biochemical pathways', Biosystems, 1998, 47, p. 9-36
-
(1998)
Biosystems
, vol.47
, pp. 9-36
-
-
Savageau, M.A.1
-
12
-
-
0015824267
-
'The control of flux'
-
Kacser, H., and Burns, J.A.: 'The control of flux', Symp. Soc. Exp. Biol., 1973, 27, p. 65-104
-
(1973)
Symp. Soc. Exp. Biol.
, vol.27
, pp. 65-104
-
-
Kacser, H.1
Burns, J.A.2
-
13
-
-
0015989446
-
'A linear steady-state treatment of enzymatic chains: General properties, control and effector strength'
-
Heinrich, R., and Rapoport, T.A.: 'A linear steady-state treatment of enzymatic chains: General properties, control and effector strength', Eur. J. Biochem., 1974, 42, p. 89-95
-
(1974)
Eur. J. Biochem.
, vol.42
, pp. 89-95
-
-
Heinrich, R.1
Rapoport, T.A.2
-
15
-
-
45949117248
-
'Biochemical systems theory and metabolic control theory. I. Fundamental similarities and differences'
-
0025-5564
-
Savageau, M.A., Voit, E.O., and Irvine, D.H.: 'Biochemical systems theory and metabolic control theory. I. Fundamental similarities and differences', Math. Biosci., 1987, 86, p. 127-145 0025-5564
-
(1987)
Math. Biosci.
, vol.86
, pp. 127-145
-
-
Savageau, M.A.1
Voit, E.O.2
Irvine, D.H.3
-
16
-
-
45949116170
-
'Biochemical systems theory and metabolic control theory. II. The role of summation and connectivity relationships'
-
0025-5564
-
Savageau, M.A., Voit, E.O., and Irvine, D.H.: 'Biochemical systems theory and metabolic control theory. II. The role of summation and connectivity relationships', Math. Biosci., 1987, 86, p. 147-169 0025-5564
-
(1987)
Math. Biosci.
, vol.86
, pp. 147-169
-
-
Savageau, M.A.1
Voit, E.O.2
Irvine, D.H.3
-
17
-
-
0030238601
-
'A pharmacodynamic model for the action of the antibiotic imipenem on Pseudomonas aeruginosa populations in vitro'
-
0092-8240
-
Berg, P.H., Voit, E.O., and White, R.L.: 'A pharmacodynamic model for the action of the antibiotic imipenem on Pseudomonas aeruginosa populations in vitro', Bull. Math. Biol., 1996, 58, p. 923-938 0092-8240
-
(1996)
Bull. Math. Biol.
, vol.58
, pp. 923-938
-
-
Berg, P.H.1
Voit, E.O.2
White, R.L.3
-
18
-
-
33846940743
-
'Kinetic modelling using S-systems and lin-log approaches'
-
0300-9467
-
Wang, F.-S., Ko, C.-L., and Voit, E.O.: 'Kinetic modelling using S-systems and lin-log approaches', Biochem. Eng. J., 2007, 33, p. 238-247 0300-9467
-
(2007)
Biochem. Eng. J.
, vol.33
, pp. 238-247
-
-
Wang, F.-S.1
Ko, C.-L.2
Voit, E.O.3
-
19
-
-
33746615693
-
'Regulation of glycolysis in Lactococcus lactis: An unfinished systems biological case study'
-
Voit, E.O., Almeida, J.S., and Marino, S.: Et al. 'Regulation of glycolysis in Lactococcus lactis: An unfinished systems biological case study', IEE Proc. Syst. Biol., 2006, 153, p. 286-98
-
(2006)
IEE Proc. Syst. Biol.
, vol.153
, pp. 286-298
-
-
Voit, E.O.1
Almeida, J.S.2
Marino, S.3
-
20
-
-
0036952309
-
'Effect of different NADH oxidase levels on glucose metabolism by Lactococcus lactis: Kinetics of intracellular metabolite pools determined by in vivo nuclear magnetic resonance'
-
Neves, A.R., Ramos, A., and Costa, H.: Et al. 'Effect of different NADH oxidase levels on glucose metabolism by Lactococcus lactis: Kinetics of intracellular metabolite pools determined by in vivo nuclear magnetic resonance', Appl. Environ. Microbiol., 2002, 68, p. 6332-6342
-
(2002)
Appl. Environ. Microbiol.
, vol.68
, pp. 6332-6342
-
-
Neves, A.R.1
Ramos, A.2
Costa, H.3
-
21
-
-
0033587788
-
'In vivo nuclear magnetic resonance studies of glycolytic kinetics in Lactococcus lactis'
-
Neves, A.R., Ramos, A., and Nunes, M.C.: Et al. 'In vivo nuclear magnetic resonance studies of glycolytic kinetics in Lactococcus lactis', Biotechnol. Bioeng., 1000, 64, p. 200-212
-
(1000)
Biotechnol. Bioeng.
, vol.64
, pp. 200-212
-
-
Neves, A.R.1
Ramos, A.2
Nunes, M.C.3
-
22
-
-
33745448269
-
'The intricate side of systems biology'
-
0027-8424
-
Voit, E.O., Neves, A.R., and Santos, H.: 'The intricate side of systems biology', Proc. Natl. Acad. Sci. USA, 2006, 103, p. 9452-9457 0027-8424
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 9452-9457
-
-
Voit, E.O.1
Neves, A.R.2
Santos, H.3
-
23
-
-
4344581658
-
'A new framework for the estimation of control parameters in metabolic pathways using lin-log kinetics'
-
Wu, L., Wang, W., van Winden, W.A., van Gulik, W.M., and Heijnen, J.J.: 'A new framework for the estimation of control parameters in metabolic pathways using lin-log kinetics', Eur. J. Biochem., 2004, 271, p. 3348-3359
-
(2004)
Eur. J. Biochem.
, vol.271
, pp. 3348-3359
-
-
Wu, L.1
Wang, W.2
van Winden, W.A.3
van Gulik, W.M.4
Heijnen, J.J.5
-
24
-
-
0030002954
-
'Rules for coupled expression of regulator and effector genes in inducible circuits'
-
Hlavacek, W.S., and Savageau, M.A.: 'Rules for coupled expression of regulator and effector genes in inducible circuits', J. Mol. Biol., 1996, 255, p. 121-139
-
(1996)
J. Mol. Biol.
, vol.255
, pp. 121-139
-
-
Hlavacek, W.S.1
Savageau, M.A.2
-
25
-
-
0037461033
-
'Dynamic modelling of genetic networks using genetic algorithm and S-system'
-
Kikuchi, S., Tominaga, D., Arita, M., Takashi, K., and Tomita, M.: 'Dynamic modelling of genetic networks using genetic algorithm and S-system', Bioinformatics, 2003, 19, p. 643-650
-
(2003)
Bioinformatics
, vol.19
, pp. 643-650
-
-
Kikuchi, S.1
Tominaga, D.2
Arita, M.3
Takashi, K.4
Tomita, M.5
-
26
-
-
15244340261
-
'Priming nonlinear searches for pathway identification'
-
Veflingstad, S., Almeida, J., and Voit, E.O.: 'Priming nonlinear searches for pathway identification', Theor. Bio. Med. Model, 2004, 1, p. 1:8
-
(2004)
Theor. Bio. Med. Model
, vol.1
-
-
Veflingstad, S.1
Almeida, J.2
Voit, E.O.3
-
27
-
-
33748511015
-
'An automated procedure for the extraction of metabolic network information from time series data'
-
Marino, S., and Voit, E.O.: 'An automated procedure for the extraction of metabolic network information from time series data', J. Bioinform. Comput. Biol., 2006, 4, p. 665-691
-
(2006)
J. Bioinform. Comput. Biol.
, vol.4
, pp. 665-691
-
-
Marino, S.1
Voit, E.O.2
-
28
-
-
15244351549
-
'Determination of elasticities, concentration and flux control coefficients from transient metabolite data using linlog kinetics'
-
Kresnowati, M.T.A., van Winden, W.A., and Heijnen, J.J.: 'Determination of elasticities, concentration and flux control coefficients from transient metabolite data using linlog kinetics', Metab. Eng., 2005, 7, p. 142-153
-
(2005)
Metab. Eng.
, vol.7
, pp. 142-153
-
-
Kresnowati, M.T.A.1
van Winden, W.A.2
Heijnen, J.J.3
-
29
-
-
33846849309
-
'A method for estimation of elasticities in metabolic networks useing steady state and dynamic metabolomics data and linlog kinetics'
-
Nikerel, I.E., van Winden, W.A., van Gulik, W.M., and Heijnen, J.J.: 'A method for estimation of elasticities in metabolic networks useing steady state and dynamic metabolomics data and linlog kinetics', BMC Bioinform., 2006, 7, p. 7:540
-
(2006)
BMC Bioinform.
, vol.7
-
-
Nikerel, I.E.1
van Winden, W.A.2
van Gulik, W.M.3
Heijnen, J.J.4
-
30
-
-
4444351989
-
'Decoupling dynamical systems for pathway identification from metabolic profiles'
-
Voit, E.O., and Almeida, J.: 'Decoupling dynamical systems for pathway identification from metabolic profiles', Bioinformatics, 2004, 20, p. 1670-1681
-
(2004)
Bioinformatics
, vol.20
, pp. 1670-1681
-
-
Voit, E.O.1
Almeida, J.2
-
31
-
-
26444479778
-
'Optimization by simulated annealing'
-
0036-8075
-
Kirkpatrick, S., Gelatt, C.D., and Vecchi, M.P.: 'Optimization by simulated annealing', Science, 1983, 220, p. 671-680 0036-8075
-
(1983)
Science
, vol.220
, pp. 671-680
-
-
Kirkpatrick, S.1
Gelatt, C.D.2
Vecchi, M.P.3
-
32
-
-
0034266683
-
'Stochastic ranking for constrained evolutionary optimization'
-
1089-778X
-
Runarsson, T.P., and Yao, X.: 'Stochastic ranking for constrained evolutionary optimization', IEEE Trans. Evol. Comput., 2000, 4, p. 284-294 1089-778X
-
(2000)
IEEE Trans. Evol. Comput.
, vol.4
, pp. 284-294
-
-
Runarsson, T.P.1
Yao, X.2
-
33
-
-
0242574982
-
'Parameter estimation in biochemical pathways: A comparison of global optimisation methods'
-
Moles, C.G., Mendes, P., and Banga, J.R.: 'Parameter estimation in biochemical pathways: A comparison of global optimisation methods', Genome Res., 2003, 13, p. 2467-2474
-
(2003)
Genome Res.
, vol.13
, pp. 2467-2474
-
-
Moles, C.G.1
Mendes, P.2
Banga, J.R.3
-
34
-
-
25844445254
-
'Parameter estimation of ordinary differential equations' IMA'
-
Li, Z., Osborne, M., and Prvan, T.: 'Parameter estimation of ordinary differential equations' IMA', J. Numer. Anal., 2005, 25, p. 264-285
-
(2005)
J. Numer. Anal.
, vol.25
, pp. 264-285
-
-
Li, Z.1
Osborne, M.2
Prvan, T.3
|