-
2
-
-
4444229345
-
Metabolomic analysis with fourier transform ion cyclotron resonance mass spectrometry
-
Edited by: GoodacreR and HarriganGG. Dordrecht, The Netherlands, Kluwer Academic Publishing
-
Goodenowe D: Metabolomic analysis with fourier transform ion cyclotron resonance mass spectrometry. Metabolic Profiling: Its role in Biomarker Discovery and Gene Function Analysis Edited by: GoodacreR and HarriganGG. Dordrecht, The Netherlands, Kluwer Academic Publishing; 2003:125-139.
-
(2003)
Metabolic Profiling: Its Role in Biomarker Discovery and Gene Function Analysis
, pp. 125-139
-
-
Goodenowe, D.1
-
3
-
-
0037008786
-
Is the glycolytic flux in Lactococcus lactis primarily controlled by the redox charge?
-
Neves AR, Ventura R, Mansour N, Shearman C, Gasson MJ, Maycook C, Ramos A, Santos H: Is the glycolytic flux in Lactococcus lactis primarily controlled by the redox charge? J Biol Chem 2002, 277:28088-28098.
-
(2002)
J Biol Chem
, vol.277
, pp. 28088-28098
-
-
Neves, A.R.1
Ventura, R.2
Mansour, N.3
Shearman, C.4
Gasson, M.J.5
Maycook, C.6
Ramos, A.7
Santos, H.8
-
4
-
-
0031594984
-
13C-NMR, MS and metabolic flux balancing in biotechnology research
-
Szyperski T: 13C-NMR, MS and metabolic flux balancing in biotechnology research. Quart Rev Biophys 1998, 31:41-106.
-
(1998)
Quart Rev Biophys
, vol.31
, pp. 41-106
-
-
Szyperski, T.1
-
5
-
-
0036653675
-
Concomitant determination of absolute values of cellular protein amounts,synthesis rates, and turnover rates by quantitative proteome profiling
-
Gerner C, Vejda S, Gelbmann D, Bayer E, Gotzman J, Schulte-Hermann R, Mikulits W: Concomitant determination of absolute values of cellular protein amounts,synthesis rates, and turnover rates by quantitative proteome profiling. Mol Cell Proteomics 2002, 1:528-537.
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 528-537
-
-
Gerner, C.1
Vejda, S.2
Gelbmann, D.3
Bayer, E.4
Gotzman, J.5
Schulte-Hermann, R.6
Mikulits, W.7
-
6
-
-
0037325818
-
A quantitative method for measuring protein phosphorylation
-
Mckenzie JA, Strauss PR: A quantitative method for measuring protein phosphorylation. Anal Biochem 2003, 313:9-16.
-
(2003)
Anal Biochem
, vol.313
, pp. 9-16
-
-
Mckenzie, J.A.1
Strauss, P.R.2
-
7
-
-
0034812859
-
Towards a novel classification of human malignancies based on gene expression pattern
-
Alizadeh AA, Ross DT, Perou CM, van de Rijn M: Towards a novel classification of human malignancies based on gene expression pattern. J Pathol 2001, 195:41-52.
-
(2001)
J Pathol
, vol.195
, pp. 41-52
-
-
Alizadeh, A.A.1
Ross, D.T.2
Perou, C.M.3
Van De Rijn, M.4
-
8
-
-
0037197832
-
Determination of causal connectivities of species in reaction networks
-
Vance W, Arkin AP, Ross J: Determination of causal connectivities of species in reaction networks. Proc Natl Acad Sci U S A 2002, 99:5816-5821.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 5816-5821
-
-
Vance, W.1
Arkin, A.P.2
Ross, J.3
-
9
-
-
0037452796
-
Experimental test of a method for determining causal connectivities of species in reactions
-
Torralba AS, Yu K, Shen P, Oefner PJ, Ross J: Experimental test of a method for determining causal connectivities of species in reactions. Proc Natl Acad Sci U S A 2003, 100:1494-1498.
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 1494-1498
-
-
Torralba, A.S.1
Yu, K.2
Shen, P.3
Oefner, P.J.4
Ross, J.5
-
10
-
-
0041744850
-
On the deduction of chemical reaction pathways from measurements of time-series of concentrations
-
Samoilov M, Arkin AP, Ross J: On the deduction of chemical reaction pathways from measurements of time-series of concentrations. Chaos 2001, 11:108-114.
-
(2001)
Chaos
, vol.11
, pp. 108-114
-
-
Samoilov, M.1
Arkin, A.P.2
Ross, J.3
-
12
-
-
0031060779
-
Lotka-Volterra representation of general nonlinear systems
-
Hernández-Bermejo B, Fairén V: Lotka-Volterra representation of general nonlinear systems. Math Biosci 1997, 140:1-32.
-
(1997)
Math Biosci
, vol.140
, pp. 1-32
-
-
Hernández-Bermejo, B.1
Fairén, V.2
-
13
-
-
0014649230
-
Biochemical systems analysis. 1. Some mathematical properties of the rate law for the component enzymatic reactions
-
Savageau MA: Biochemical systems analysis. 1. Some mathematical properties of the rate law for the component enzymatic reactions. J Theor Biol 1969, 25:365-369.
-
(1969)
J Theor Biol
, vol.25
, pp. 365-369
-
-
Savageau, M.A.1
-
14
-
-
0014658880
-
Biochemical systems analysis. 2. The steady-state solutions for an n-pool system using a power law approximation
-
Savageau MA: Biochemical systems analysis. 2. The steady-state solutions for an n-pool system using a power law approximation. J Theor Biol 1969, 25:370-379.
-
(1969)
J Theor Biol
, vol.25
, pp. 370-379
-
-
Savageau, M.A.1
-
16
-
-
0001622717
-
Power-law approach to modeling biological systems; II. Application to ethanol production
-
Voit EO, Savageau MA: Power-law approach to modeling biological systems; II. Application to ethanol production. J Ferment Technol 1982, 60:229-232.
-
(1982)
J Ferment Technol
, vol.60
, pp. 229-232
-
-
Voit, E.O.1
Savageau, M.A.2
-
17
-
-
0001622717
-
Power-law approach to modeling biological systems; III. Methods of analysis
-
Voit EO, Savageau MA: Power-law approach to modeling biological systems; III. Methods of analysis. J Ferment Technol 1982, 60:233-241.
-
(1982)
J Ferment Technol
, vol.60
, pp. 233-241
-
-
Voit, E.O.1
Savageau, M.A.2
-
18
-
-
0033737840
-
Inferring qualitative relations in genetic networks and metabolic pathways
-
Akutsu T, Miyano S, Kuhara S: Inferring qualitative relations in genetic networks and metabolic pathways. Bioinformatics 2000, 16:727-734.
-
(2000)
Bioinformatics
, vol.16
, pp. 727-734
-
-
Akutsu, T.1
Miyano, S.2
Kuhara, S.3
-
19
-
-
0034863951
-
Inferring a system of differential equations for a gene regulatory network by using genetic programming
-
Sakamoto E, Iba H: Inferring a system of differential equations for a gene regulatory network by using genetic programming. Proc of the 2001 Congr Evolut Comput CEC2001 2001:720-726.
-
(2001)
Proc of the 2001 Congr Evolut Comput CEC2001
, pp. 720-726
-
-
Sakamoto, E.1
Iba, H.2
-
20
-
-
0035221090
-
Development of a system for the inference of large scale genetic networks
-
Maki Y, Tominaga D, Okamoto M, Watanabe S, Eguchi Y: Development of a system for the inference of large scale genetic networks. Pac Symp Biocomput 2001:446-458.
-
(2001)
Pac Symp Biocomput
, pp. 446-458
-
-
Maki, Y.1
Tominaga, D.2
Okamoto, M.3
Watanabe, S.4
Eguchi, Y.5
-
21
-
-
0037461033
-
Dynamic modeling of genetic networks using genetic algorithm and S-system
-
Kikuchi S, Tominaga D, Arita M, Takahashi K, Tomita M: Dynamic modeling of genetic networks using genetic algorithm and S-system. Bioinformatics 2003, 19:643-650.
-
(2003)
Bioinformatics
, vol.19
, pp. 643-650
-
-
Kikuchi, S.1
Tominaga, D.2
Arita, M.3
Takahashi, K.4
Tomita, M.5
-
22
-
-
0041594045
-
Dynamic profiling and canonical modeling: Powerful partners in metabolic pathway identification
-
Edited by: GoodacreR and HarriganGG. Dordrect, The Netherlands, Kluwer Academic Publishing
-
Voit EO, Almeida J: Dynamic profiling and canonical modeling: Powerful partners in metabolic pathway identification. Metabolic Profiling: Its role in Biomarker Discovery and Gene Function Analysis Edited by: GoodacreR and HarriganGG. Dordrect, The Netherlands, Kluwer Academic Publishing; 2003:125-139.
-
(2003)
Metabolic Profiling: Its Role in Biomarker Discovery and Gene Function Analysis
, pp. 125-139
-
-
Voit, E.O.1
Almeida, J.2
-
23
-
-
4344592548
-
Neural-network-based parameter estimation in complex biomedical systems
-
Almeida J, Voit EO: Neural-network-based parameter estimation in complex biomedical systems. Genome Informatics 2003, 14:114-123.
-
(2003)
Genome Informatics
, vol.14
, pp. 114-123
-
-
Almeida, J.1
Voit, E.O.2
-
24
-
-
4444351989
-
Decoupling dynamical systems for pathway identification from metabolic profiles
-
Voit EO, Almeida J: Decoupling dynamical systems for pathway identification from metabolic profiles. Bioinformatics 2004, 20:1670-1681.
-
(2004)
Bioinformatics
, vol.20
, pp. 1670-1681
-
-
Voit, E.O.1
Almeida, J.2
-
25
-
-
0037359826
-
Application of a new method of nonlinear dynamical system identification to biochemical problems
-
Karnaukhov AV, Karnaukhova EV: Application of a new method of nonlinear dynamical system identification to biochemical problems. Biochemistry (Mosc) 2003, 68:253-259.
-
(2003)
Biochemistry (Mosc)
, vol.68
, pp. 253-259
-
-
Karnaukhov, A.V.1
Karnaukhova, E.V.2
-
26
-
-
0027943868
-
Identifiability and indistinguishability of nonlinear pharmacokinetic models
-
Godfrey KR, Chapman MJ, Vajda S: Identifiability and indistinguishability of nonlinear pharmacokinetic models. J Pharmacokinet Biopharm 1994, 22:229-257.
-
(1994)
J Pharmacokinet Biopharm
, vol.22
, pp. 229-257
-
-
Godfrey, K.R.1
Chapman, M.J.2
Vajda, S.3
-
27
-
-
0033707946
-
Using Bayesian networks to analyze expression data
-
Friedman N, Linial M, Nachman I, Pe'er D: Using Bayesian networks to analyze expression data. J Comput Biol 2000, 7:601-620.
-
(2000)
J Comput Biol
, vol.7
, pp. 601-620
-
-
Friedman, N.1
Linial, M.2
Nachman, I.3
Pe'er, D.4
-
28
-
-
0030848624
-
A test case of correlation metric construction of a reaction pathway from measurements
-
Arkin AP, Shen PD, Ross J: A test case of correlation metric construction of a reaction pathway from measurements. Science 1997, 277:1275-1279.
-
(1997)
Science
, vol.277
, pp. 1275-1279
-
-
Arkin, A.P.1
Shen, P.D.2
Ross, J.3
-
29
-
-
0033655775
-
Mutual information relevance networks: Functional genomic clustering using pairwise entropy measurements
-
Butte AJ, Kohane IS: Mutual information relevance networks: functional genomic clustering using pairwise entropy measurements. Pac Symp Biocomput 2000:418-429.
-
(2000)
Pac Symp Biocomput
, pp. 418-429
-
-
Butte, A.J.1
Kohane, I.S.2
-
30
-
-
4444377608
-
Pathway finding from given time courses using genetic algorithms
-
Kikuchi S, Tominaga D, Arita M, Tomita M: Pathway finding from given time courses using genetic algorithms. Genome Informatics 2001, 12:304-305.
-
(2001)
Genome Informatics
, vol.12
, pp. 304-305
-
-
Kikuchi, S.1
Tominaga, D.2
Arita, M.3
Tomita, M.4
-
32
-
-
0001622226
-
Toward a systematic determination of complex reaction mechanisms
-
Chevalier T, Schreiber I, Ross J: Toward a systematic determination of complex reaction mechanisms. J Phys Chem 1993, 97:6776-6787.
-
(1993)
J Phys Chem
, vol.97
, pp. 6776-6787
-
-
Chevalier, T.1
Schreiber, I.2
Ross, J.3
-
33
-
-
0035004874
-
Simplified method for the computation of parameters of power-law rate equations from time-series
-
Diaz-Sierra R, Fairén V: Simplified method for the computation of parameters of power-law rate equations from time-series. Math Biosci 2001, 171:1-19.
-
(2001)
Math Biosci
, vol.171
, pp. 1-19
-
-
Diaz-Sierra, R.1
Fairén, V.2
-
34
-
-
0001064134
-
Deduction of chemical mechanisms from the linear response around steady state
-
Diaz-Sierra R, Lozano JB, Fairén V: Deduction of chemical mechanisms from the linear response around steady state. J Phys Chem 1999, 103:337-343.
-
(1999)
J Phys Chem
, vol.103
, pp. 337-343
-
-
Diaz-Sierra, R.1
Lozano, J.B.2
Fairén, V.3
-
35
-
-
0038048325
-
Inferring Genetic Networks and Identifying Compound Mode of Action via Expression Profiling
-
Gardner Timothy S., di Bernardo Diego, Lorenz David, Collins James J.: Inferring Genetic Networks and Identifying Compound Mode of Action via Expression Profiling. Science 2003, 301:102-105.
-
(2003)
Science
, vol.301
, pp. 102-105
-
-
Gardner Timothy, S.1
Di Bernardo, D.2
Lorenz, D.3
Collins, J.J.4
-
36
-
-
0028347018
-
Structure Identifiability in Metabolic Pathways - Parameter- Estimation in Models Based on the Power-Law Formalism
-
Sorribas A, Cascante M: Structure Identifiability in Metabolic Pathways - Parameter- Estimation in Models Based on the Power-Law Formalism. Biochem J 1994, 298:303-311.
-
(1994)
Biochem J
, vol.298
, pp. 303-311
-
-
Sorribas, A.1
Cascante, M.2
-
37
-
-
0030024376
-
On the analysis of the inverse problem of metabolic pathways using artificial neural networks
-
Mendes P, Kell DB: On the analysis of the inverse problem of metabolic pathways using artificial neural networks. Biosystems 1996, 38:15-28.
-
(1996)
Biosystems
, vol.38
, pp. 15-28
-
-
Mendes, P.1
Kell, D.B.2
-
38
-
-
0033691089
-
Hybrid modeling of biotechnological processes using neural networks
-
Chen L, Bernard O, Bastin G, Angelov P: Hybrid modeling of biotechnological processes using neural networks. Control Eng Pract 2000, 8:821-827.
-
(2000)
Control Eng Pract
, vol.8
, pp. 821-827
-
-
Chen, L.1
Bernard, O.2
Bastin, G.3
Angelov, P.4
-
39
-
-
4444351989
-
Decoupling dynamical systems for pathway identification
-
Voit EO, Almeida JS: Decoupling dynamical systems for pathway identification. Bioinformatics 2004, 20:1670-1681.
-
(2004)
Bioinformatics
, vol.20
, pp. 1670-1681
-
-
Voit, E.O.1
Almeida, J.S.2
-
40
-
-
0022687590
-
Equivalence between S-systems and Volterra-systems
-
Voit EO, Savageau MA: Equivalence between S-systems and Volterra-systems. Math Biosci 1986, 78:47-55.
-
(1986)
Math Biosci
, vol.78
, pp. 47-55
-
-
Voit, E.O.1
Savageau, M.A.2
-
42
-
-
0030002954
-
Rules for coupled expression of regulator and effector genes in inducible circuits
-
Hlavacek WS, Savageau MA: Rules for coupled expression of regulator and effector genes in inducible circuits. J Mol Biol 1996, 255:121-139.
-
(1996)
J Mol Biol
, vol.255
, pp. 121-139
-
-
Hlavacek, W.S.1
Savageau, M.A.2
-
45
-
-
0036469175
-
Predictive non-linear modeling of complex data by artificial neural networks
-
Almeida J: Predictive non-linear modeling of complex data by artificial neural networks. Curr Opin Biotechnol 2002, 13:72-76.
-
(2002)
Curr Opin Biotechnol
, vol.13
, pp. 72-76
-
-
Almeida, J.1
-
46
-
-
0024866495
-
On the approximate realization of continuous mappings by neural networks
-
Funahashi K,I,: On the approximate realization of continuous mappings by neural networks. Neural Networks 1989, 2:183-192.
-
(1989)
Neural Networks
, vol.2
, pp. 183-192
-
-
Funahashi, K.I.1
-
47
-
-
0000482208
-
Deriving chemical and biochemical model networks from experimental measurements
-
Sorribas A, Lozano JB, Fairén V: Deriving chemical and biochemical model networks from experimental measurements. Recent Res Devel Phys Chem 1998, 2:553-573.
-
(1998)
Recent Res Devel Phys Chem
, vol.2
, pp. 553-573
-
-
Sorribas, A.1
Lozano, J.B.2
Fairén, V.3
|