-
1
-
-
33745625661
-
The identifiability of tree topology for phylogenetic models, including covarion and mixture models
-
ALLMAN, E. S. AND RHODES, J. A. (2006). The identifiability of tree topology for phylogenetic models, including covarion and mixture models. J. Comput. Biol. 13, 1101-1113.
-
(2006)
J. Comput. Biol
, vol.13
, pp. 1101-1113
-
-
ALLMAN, E.S.1
RHODES, J.A.2
-
2
-
-
37349112112
-
Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites
-
ALLMAN, E. S. AND RHODES, J. A. (2008). Identifying evolutionary trees and substitution parameters for the general Markov model with invariable sites. Math. Biosci. 211, 18-33.
-
(2008)
Math. Biosci
, vol.211
, pp. 18-33
-
-
ALLMAN, E.S.1
RHODES, J.A.2
-
3
-
-
0030588055
-
-
CHANG, J. T. (1996). Full reconstruction of Markov models on evolutionary trees: identifiability and consistency. Math. Biosci. 137, 51-73.
-
CHANG, J. T. (1996). Full reconstruction of Markov models on evolutionary trees: identifiability and consistency. Math. Biosci. 137, 51-73.
-
-
-
-
5
-
-
44649193651
-
Modelling the variability of evolutionary processes
-
eds O. Gascuel and M. Steel, Oxford University Press, pp
-
GASCUEL, O. AND GUIDON, S. (2007). Modelling the variability of evolutionary processes. In Reconstructing Evolution: New Mathematical and Computational Advances, eds O. Gascuel and M. Steel, Oxford University Press, pp. 65-107.
-
(2007)
Reconstructing Evolution: New Mathematical and Computational Advances
, pp. 65-107
-
-
GASCUEL, O.1
GUIDON, S.2
-
7
-
-
7244221755
-
Performance of maximum parsimony and likelihood phylo-genetics when evolution is heterogeneous
-
KOLACZKOWSKI, B. AND THORNTON, J. (2004). Performance of maximum parsimony and likelihood phylo-genetics when evolution is heterogeneous. Nature 431, 980-984.
-
(2004)
Nature
, vol.431
, pp. 980-984
-
-
KOLACZKOWSKI, B.1
THORNTON, J.2
-
8
-
-
38449104891
-
Phylogenetic mixtures on a single tree can mimic a tree of another topology
-
MATSEN, F. A. AND STEEL, M. A. (2007). Phylogenetic mixtures on a single tree can mimic a tree of another topology. Syst. Biol. 56, 767-775.
-
(2007)
Syst. Biol
, vol.56
, pp. 767-775
-
-
MATSEN, F.A.1
STEEL, M.A.2
-
9
-
-
43349103394
-
Mixed-up trees: The structure of phylogenetic mixtures
-
To appear in
-
MATSEN, F. A., MOSSEL, E. AND STEEL, M. (2008). Mixed-up trees: the structure of phylogenetic mixtures. To appear in Bull. Math. Biol.
-
(2008)
Bull. Math. Biol
-
-
MATSEN, F.A.1
MOSSEL, E.2
STEEL, M.3
-
10
-
-
4243140058
-
A phylogenetic mixture model for detecting pattern-heterogeneity in gene sequence or character-state data
-
PAGEL, M. AND MEADE, A. (2004). A phylogenetic mixture model for detecting pattern-heterogeneity in gene sequence or character-state data. Syst. Biol. 53, 571-581.
-
(2004)
Syst. Biol
, vol.53
, pp. 571-581
-
-
PAGEL, M.1
MEADE, A.2
-
11
-
-
0035527368
-
-
ROGERS, J. S. (2001). Maximum likelihood estimation of phylogenetic trees is consistent when substitution rates vary according to the invariable sites plus gamma distribution. Syst. Biol. 50, 713-722.
-
ROGERS, J. S. (2001). Maximum likelihood estimation of phylogenetic trees is consistent when substitution rates vary according to the invariable sites plus gamma distribution. Syst. Biol. 50, 713-722.
-
-
-
-
13
-
-
0028457461
-
Reconstructing trees from sequences whose sites evolve at variable rates
-
STEEL, M. A., SZÉKELY, L. AND HENDY, M. D. (1994). Reconstructing trees from sequences whose sites evolve at variable rates. J. Comput. Biol. 1, 153-163.
-
(1994)
J. Comput. Biol
, vol.1
, pp. 153-163
-
-
STEEL, M.A.1
SZÉKELY, L.2
HENDY, M.D.3
-
14
-
-
34248187246
-
Phylogeny of mixture models: Robustness of maximum likelihood and non-identifiable distributions
-
ŠTEFANKOVIČ, D. AND VIGODA, E. (2007). Phylogeny of mixture models: robustness of maximum likelihood and non-identifiable distributions. J. Comput. Biol. 14, 156-189.
-
(2007)
J. Comput. Biol
, vol.14
, pp. 156-189
-
-
ŠTEFANKOVIČ, D.1
VIGODA, E.2
-
15
-
-
34247597358
-
Pitfalls of heterogeneous processes for phylogenetic reconstruction
-
ŠTEFANKOVIČ, D. AND VIGODA, E. (2007). Pitfalls of heterogeneous processes for phylogenetic reconstruction. Syst. Biol. 56, 113-124.
-
(2007)
Syst. Biol
, vol.56
, pp. 113-124
-
-
ŠTEFANKOVIČ, D.1
VIGODA, E.2
-
16
-
-
0032875445
-
The effect of taxon sampling on estimating rate heterogeneity parameters of maximum-likelihood models
-
SULLIVAN, J., SWOFFORD, D. L. AND NAYLOR, G. J. P. (1999). The effect of taxon sampling on estimating rate heterogeneity parameters of maximum-likelihood models. Molec. Biol. Evolution 16, 1347-1356.
-
(1999)
Molec. Biol. Evolution
, vol.16
, pp. 1347-1356
-
-
SULLIVAN, J.1
SWOFFORD, D.L.2
NAYLOR, G.J.P.3
-
17
-
-
0028064845
-
Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
-
YANG, Z. (1994). Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J. Molec. Evol. 39, 306-314.
-
(1994)
J. Molec. Evol
, vol.39
, pp. 306-314
-
-
YANG, Z.1
|