-
1
-
-
0002074731
-
The recovery of trees from measures of dissimilarity
-
(F. R. Hodson and D. G. Kendall, eds.). Edinburgh Univ. Press, Edinburgh, Scotland
-
BUNEMAN, P. 1971. The recovery of trees from measures of dissimilarity. Pages 387-395 in Mathematics in the archaeological and historical sciences (F. R. Hodson and D. G. Kendall, eds.). Edinburgh Univ. Press, Edinburgh, Scotland.
-
(1971)
Mathematics in the Archaeological and Historical Sciences
, pp. 387-395
-
-
Buneman, P.1
-
2
-
-
0030588055
-
Full reconstruction of markov models on evolutionary trees: Identifiability and consistency
-
CHANG, J. T. 1996. Full reconstruction of Markov models on evolutionary trees: Identifiability and consistency. Math. Biosci. 137:51-73.
-
(1996)
Math. Biosci.
, vol.137
, pp. 51-73
-
-
Chang, J.T.1
-
3
-
-
0000074814
-
Likelihood and inconsistency
-
FARRIS, J. S. 1999. Likelihood and inconsistency. Cladistics 15:199-204.
-
(1999)
Cladistics
, vol.15
, pp. 199-204
-
-
Farris, J.S.1
-
4
-
-
84959848780
-
Maximum likelihood and minimum-steps methods for estimating evolutionary trees from data on discrete characters
-
FELSENSTEIN, J. 1973. Maximum likelihood and minimum-steps methods for estimating evolutionary trees from data on discrete characters. Syst. Zool. 22:240-249.
-
(1973)
Syst. Zool.
, vol.22
, pp. 240-249
-
-
Felsenstein, J.1
-
5
-
-
84959798530
-
Cases in which parsimony or compatibility methods will be positively misleading
-
FELSENSTEIN, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27:401-110.
-
(1978)
Syst. Zool.
, vol.27
, pp. 401-1110
-
-
Felsenstein, J.1
-
6
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
FELSENSTEIN, J. 1981. Evolutionary trees from DNA sequences: A maximum likelihood approach. J. Mol. Evol. 17:368-376.
-
(1981)
J. Mol. Evol.
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
7
-
-
0027526039
-
Statistical tests for models of DNA substitution
-
GOLDMAN, N. 1993. Statistical tests for models of DNA substitution. J. Mol. Evol. 36:182-198.
-
(1993)
J. Mol. Evol.
, vol.36
, pp. 182-198
-
-
Goldman, N.1
-
8
-
-
0029068893
-
Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites
-
Gu, X, Y. Fu., AND W. LI. 1995. Maximum likelihood estimation of the heterogeneity of substitution rate among nucleotide sites. Mol. Biol. Evol. 12:546-557.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 546-557
-
-
Gu, X.1
Fu, Y.2
Li, W.3
-
9
-
-
0022376704
-
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
-
HASEGAWA, M., H. KISHINO, AND T. YANO. 1985. Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22:160-174.
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 160-174
-
-
Kishino, H.1
Yano, T.2
-
10
-
-
12044255023
-
Success of phylogenetic methods in the four-taxon case
-
HUELSENBECK, J. P., AND D. M. HILLIS. 1993. Success of phylogenetic methods in the four-taxon case. Syst. Biol. 42:247-264.
-
(1993)
Syst. Biol.
, vol.42
, pp. 247-264
-
-
Huelsenbeck, J.P.1
Hillis, D.M.2
-
11
-
-
0021277009
-
A new method for calculating evolutionary substitution rates
-
LANAVE, C., G. PREPARATA, C. SACCONE, AND G. SERIO. 1984. A new method for calculating evolutionary substitution rates. J. Mol. Evol. 20:86-93.
-
(1984)
J. Mol. Evol.
, vol.20
, pp. 86-93
-
-
Lanave, C.1
Preparata, G.2
Saccone, C.3
Serio, G.4
-
13
-
-
0025267792
-
The general stochastic model of nucleotide substitution
-
RODRÍGUEZ, F., J. L. OLIVER, A. MARIN, AND J. R. MEDINA. 1990. The general stochastic model of nucleotide substitution. J. Theor. Biol. 142:485-501.
-
(1990)
J. Theor. Biol.
, vol.142
, pp. 485-501
-
-
Rodríguez, F.1
Oliver, J.L.2
Marin, A.3
Medina, J.R.4
-
14
-
-
0031284363
-
On the consistency of maximum likelihood estimation of phylogenetic trees from nucleotide sequences
-
ROGERS, J. S. 1997. On the consistency of maximum likelihood estimation of phylogenetic trees from nucleotide sequences. Syst. Biol. 46:354-357.
-
(1997)
Syst. Biol.
, vol.46
, pp. 354-357
-
-
Rogers, J.S.1
-
15
-
-
0030045281
-
Efficiencies of different genes and different tree-building methods in recovering a known vertebrate phylogeny
-
RUSSO, C. A. M., N. TAKEZAKI, AND M. NEI. 1996. Efficiencies of different genes and different tree-building methods in recovering a known vertebrate phylogeny. Mol. Biol. Evol. 13:525-536.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 525-536
-
-
Russo, C.A.M.1
Takezaki, N.2
M, N.E.I.3
-
16
-
-
0023898050
-
Property and efficiency of the maximum likelihood method for molecular phylogeny
-
SAITOU, N. 1988. Property and efficiency of the maximum likelihood method for molecular phylogeny. J. Mol. Evol. 27:261-273.
-
(1988)
J. Mol. Evol.
, vol.27
, pp. 261-273
-
-
Saitou, N.1
-
17
-
-
0000215283
-
Success of parsimony in the four-taxon case: Long-branch repulsion by likelihood in the Farris zone
-
SIDDALL, M. E. 1998. Success of parsimony in the four-taxon case: Long-branch repulsion by likelihood in the Farris zone. Cladistics 14:209-220.
-
(1998)
Cladistics
, vol.14
, pp. 209-220
-
-
Siddall, M.E.1
-
18
-
-
0028457461
-
Reconstructing trees when sequence sites evolve at variable rates
-
STEEL, M. A., L. A. SZÉKELY, AND M. D. HENDY. 1994. Reconstructing trees when sequence sites evolve at variable rates. J. Comp. Biol. 1:153-163.
-
(1994)
J. Comp. Biol.
, vol.1
, pp. 153-163
-
-
Steel, M.A.1
Székely, L.A.2
Hendy, M.D.3
-
19
-
-
0032875445
-
The effect of taxon sampling on estimating rate heterogeneity parameters of maximum-likelihood models
-
SULLIVAN, J., D. L. SWOFFORD, AND G. J. P. NAYLOR. 1999. The effect of taxon sampling on estimating rate heterogeneity parameters of maximum-likelihood models. Mol. Biol. Evol. 16:1347-1356.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1347-1356
-
-
Sullivan, J.1
Swofford, D.L.2
Naylor, G.J.P.3
-
20
-
-
0001336205
-
Phylogenetic inference
-
(D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer, Sunderland, Massachusetts
-
SWOFFORD, D. L., G. J. OLSEN, P. J. WADDELL, AND D. M. Hillis. 1996. Phylogenetic inference. Pages 407-514 in Molecular systematics, 2nd edition (D. M. Hillis, C. Moritz, and B. K. Mable, eds.). Sinauer, Sunderland, Massachusetts.
-
(1996)
Molecular Systematics, 2nd Edition
, pp. 407-514
-
-
Swofford, D.L.1
Olsen, G.J.2
Waddell, P.J.3
Hillis, D.M.4
-
21
-
-
0035527406
-
Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods
-
SWOFFORD, D. L., P. J. WADDELL, J. P. HUELSENBECK, P. G. FOSTER, P. O. LEWIS, AND J. S. ROGERS. 2001. Bias in phylogenetic estimation and its relevance to the choice between parsimony and likelihood methods. Syst. Biol.
-
(2001)
Syst. Biol.
-
-
Swofford, D.L.1
Waddell, P.J.2
Huelsenbeck, J.P.3
Foster, P.G.4
Lewis, P.O.5
Rogers, J.S.6
-
22
-
-
0000167944
-
Note on the consistency of the maximum likelihood estimate
-
WALD, A. 1949. Note on the consistency of the maximum likelihood estimate. Ann. Math. Stat. 20:595-601.
-
(1949)
Ann. Math. Stat.
, vol.20
, pp. 595-601
-
-
Wald, A.1
-
23
-
-
12044257838
-
Statistical properties of the maximum likelihood method of phylogenetic estimation and comparison with distance matrix methods
-
YANG, Z. 1994. Statistical properties of the maximum likelihood method of phylogenetic estimation and comparison with distance matrix methods. Syst. Biol. 43:329-342.
-
(1994)
Syst. Biol.
, vol.43
, pp. 329-342
-
-
Yang, Z.1
-
24
-
-
0029878719
-
Phylogenetic analysis using parsimony and likelihood methods
-
YANG, Z. 1996a. Phylogenetic analysis using parsimony and likelihood methods. J. Mol. Evol. 42:294-307.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 294-307
-
-
Yang, Z.1
-
25
-
-
0030451420
-
Among-site rate variation and its impact on phylogenetic analyses
-
YANG, Z. 1996b. Among-site rate variation and its impact on phylogenetic analyses. TREE 11:367-372.
-
(1996)
Tree
, vol.11
, pp. 367-372
-
-
Yang, Z.1
-
26
-
-
0029469716
-
Maximum likelihood trees from DNA sequences: A peculiar statistical estimation problem
-
YANG, Z., N. GOLDMAN, AND A. FRIDAY. 1995. Maximum likelihood trees from DNA sequences: A peculiar statistical estimation problem. Syst. Biol. 44:384-399.
-
(1995)
Syst. Biol.
, vol.44
, pp. 384-399
-
-
Yang, Z.1
Goldman, N.2
Friday, A.3
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