-
1
-
-
0029871975
-
The interwoven architecture of the Mu transposase couples DNA synapsis to catalysis
-
Aldaz H, Schuster E, Baker TA (1996) The interwoven architecture of the Mu transposase couples DNA synapsis to catalysis. Cell 85: 257-269
-
(1996)
Cell
, vol.85
, pp. 257-269
-
-
Aldaz, H.1
Schuster, E.2
Baker, T.A.3
-
3
-
-
85158061254
-
Chemical mechanisms for mobilizing DNA
-
Craig NL, Craigie R, Gellert M, Lambowitz AM (eds). Washington, DC: ASM Press
-
Baker TA, Mizuuchi K (2002) Chemical mechanisms for mobilizing DNA. In Mobile DNA II, Craig NL, Craigie R, Gellert M, Lambowitz AM (eds) pp 12-23. Washington, DC: ASM Press
-
(2002)
Mobile DNA II
, pp. 12-23
-
-
Baker, T.A.1
Mizuuchi, K.2
-
4
-
-
0032055477
-
Transposase makes critical contacts with, and is stimulated by, single-stranded DNA at the P element termini in vitro
-
Beall EL, Rio DC (1998) Transposase makes critical contacts with, and is stimulated by, single-stranded DNA at the P element termini in vitro. EMBO J 17: 2122-2136
-
(1998)
EMBO J
, vol.17
, pp. 2122-2136
-
-
Beall, E.L.1
Rio, D.C.2
-
5
-
-
0035902490
-
DNA cleavage and religation by human topoisomerase II alpha at high temperature
-
Bromberg KD, Osheroff N (2001) DNA cleavage and religation by human topoisomerase II alpha at high temperature. Biochemistry 40: 8410-8418
-
(2001)
Biochemistry
, vol.40
, pp. 8410-8418
-
-
Bromberg, K.D.1
Osheroff, N.2
-
6
-
-
0028865574
-
High-resolution structure of the catalytic domain of avian sarcoma virus integrase
-
Bujacz G, Jaskolski M, Alexandratos J, Wlodawer A, Merkel G, Katz RA, Skalka AM (1995) High-resolution structure of the catalytic domain of avian sarcoma virus integrase. J Mol Biol 253: 333-346
-
(1995)
J Mol Biol
, vol.253
, pp. 333-346
-
-
Bujacz, G.1
Jaskolski, M.2
Alexandratos, J.3
Wlodawer, A.4
Merkel, G.5
Katz, R.A.6
Skalka, A.M.7
-
7
-
-
85158020392
-
Transpsition of phage Mu DNA
-
Craig NL, Craigie R, Gellert M, Lambowitz AM (eds). Washington, DC: ASM Press
-
Chaconas G, Harshey RM (2002) Transpsition of phage Mu DNA. In Mobile DNA II, Craig NL, Craigie R, Gellert M, Lambowitz AM (eds) pp 384-402. Washington, DC: ASM Press
-
(2002)
Mobile DNA II
, pp. 384-402
-
-
Chaconas, G.1
Harshey, R.M.2
-
8
-
-
0027971617
-
Juxtaposition of two viral DNA ends in a bimolecular disintegration reaction mediated by multimers of human immunodeficiency virus type 1 or murine leukemia virus integrase
-
Chow SA, Brown PO (1994) Juxtaposition of two viral DNA ends in a bimolecular disintegration reaction mediated by multimers of human immunodeficiency virus type 1 or murine leukemia virus integrase. J Virol 68: 7869-7878
-
(1994)
J Virol
, vol.68
, pp. 7869-7878
-
-
Chow, S.A.1
Brown, P.O.2
-
9
-
-
0026549933
-
Reversal of integration and DNA splicing mediated by integrase of human immunodeficiency virus
-
Chow SA, Vincent KA, Ellison V, Brown PO (1992) Reversal of integration and DNA splicing mediated by integrase of human immunodeficiency virus. Science 255: 723-726
-
(1992)
Science
, vol.255
, pp. 723-726
-
-
Chow, S.A.1
Vincent, K.A.2
Ellison, V.3
Brown, P.O.4
-
10
-
-
0001899249
-
Preparation of nucleic acids for electron microscopy
-
Sommerville J, Scheer U (eds). Oxford, Washington, DC: IRL Press
-
Coggins LW (1987) Preparation of nucleic acids for electron microscopy. In Electron Microscopy in Molecular Biology: A Practical Approach, Sommerville J, Scheer U (eds) pp 1-29. Oxford, Washington, DC: IRL Press
-
(1987)
Electron Microscopy in Molecular Biology: A Practical Approach
, pp. 1-29
-
-
Coggins, L.W.1
-
12
-
-
85158002042
-
Retroviral DNA integration
-
Craig NL, Craigie R, Gellert M, Lambowitz AM (eds). Washington, DC: ASM Press
-
Craigie R (2002) Retroviral DNA integration. In Mobile DNA II, Craig NL, Craigie R, Gellert M, Lambowitz AM (eds) pp 613-630. Washington, DC: ASM Press
-
(2002)
Mobile DNA II
, pp. 613-630
-
-
Craigie, R.1
-
13
-
-
0018894384
-
Selfish genes, the phenotype paradigm and genome evolution
-
Doolittle WF, Sapienza C (1980) Selfish genes, the phenotype paradigm and genome evolution. Nature 284: 601-603
-
(1980)
Nature
, vol.284
, pp. 601-603
-
-
Doolittle, W.F.1
Sapienza, C.2
-
14
-
-
0028584269
-
Crystal structure of the catalytic domain of HIV-1 integrase: Similarity to other polynucleotidyl transferases
-
Dyda F, Hickman AB, Jenkins TM, Engelman A, Craigie R, Davies DR (1994) Crystal structure of the catalytic domain of HIV-1 integrase: similarity to other polynucleotidyl transferases. Science 266: 1981-1986
-
(1994)
Science
, vol.266
, pp. 1981-1986
-
-
Dyda, F.1
Hickman, A.B.2
Jenkins, T.M.3
Engelman, A.4
Craigie, R.5
Davies, D.R.6
-
15
-
-
0026330796
-
HIV-1 DNA integration: Mechanism of viral DNA cleavage and DNA strand transfer
-
Engelman A, Mizuuchi K, Craigie R (1991) HIV-1 DNA integration: mechanism of viral DNA cleavage and DNA strand transfer. Cell 67: 1211-1221
-
(1991)
Cell
, vol.67
, pp. 1211-1221
-
-
Engelman, A.1
Mizuuchi, K.2
Craigie, R.3
-
16
-
-
0033584864
-
Stereospecificity of reactions catalyzed by HIV-1 integrase
-
Gerton JL, Herschlag D, Brown PO (1999) Stereospecificity of reactions catalyzed by HIV-1 integrase. J Biol Chem 274: 33480-33487
-
(1999)
J Biol Chem
, vol.274
, pp. 33480-33487
-
-
Gerton, J.L.1
Herschlag, D.2
Brown, P.O.3
-
17
-
-
0037169531
-
DNA transposition of bacteriophage Mu. A quantitative analysis of target site selection in vitro
-
Haapa-Paananen S, Rita H, Savilahti H (2002) DNA transposition of bacteriophage Mu. A quantitative analysis of target site selection in vitro. J Biol Chem 277: 2843-2851
-
(2002)
J Biol Chem
, vol.277
, pp. 2843-2851
-
-
Haapa-Paananen, S.1
Rita, H.2
Savilahti, H.3
-
18
-
-
0024353277
-
Evidence for the reversibility of cellular DNA lesion induced by mammalian topoisomerase II poisons
-
Hsiang YH, Liu LF (1989) Evidence for the reversibility of cellular DNA lesion induced by mammalian topoisomerase II poisons. J Biol Chem 264: 9713-9715
-
(1989)
J Biol Chem
, vol.264
, pp. 9713-9715
-
-
Hsiang, Y.H.1
Liu, L.F.2
-
19
-
-
0027404102
-
Characterization of the forward and reverse integration reactions of the Moloney murine leukemia virus integrase protein purified from Escherichia coli
-
Jonsson CB, Donzella GA, Roth MJ (1993) Characterization of the forward and reverse integration reactions of the Moloney murine leukemia virus integrase protein purified from Escherichia coli. J Biol Chem 268: 1462-1469
-
(1993)
J Biol Chem
, vol.268
, pp. 1462-1469
-
-
Jonsson, C.B.1
Donzella, G.A.2
Roth, M.J.3
-
20
-
-
1542513556
-
Mobile elements: Drivers of genome evolution
-
Kazazian Jr HH (2004) Mobile elements: drivers of genome evolution. Science 303: 1626-1632
-
(2004)
Science
, vol.303
, pp. 1626-1632
-
-
Kazazian Jr., H.H.1
-
21
-
-
0028883169
-
Step-arrest mutants of phage Mu transposase: Implications in nucleoprotein assembly, DNA cleavage and strand transfer
-
Kim K, Namgoong SY, Jayaram M, Harshey RM (1995) Step-arrest mutants of phage Mu transposase: implications in nucleoprotein assembly, DNA cleavage and strand transfer. J Biol Chem 270: 1472-1479
-
(1995)
J Biol Chem
, vol.270
, pp. 1472-1479
-
-
Kim, K.1
Namgoong, S.Y.2
Jayaram, M.3
Harshey, R.M.4
-
22
-
-
0036752746
-
The Mu three-site synapse: A strained assembly platform in which delivery of the L1 transposase binding site triggers catalytic commitment
-
Kobryn K, Watson MA, Allison RG, Chaconas G (2002) The Mu three-site synapse: a strained assembly platform in which delivery of the L1 transposase binding site triggers catalytic commitment. Mol Cell 10: 659-669
-
(2002)
Mol Cell
, vol.10
, pp. 659-669
-
-
Kobryn, K.1
Watson, M.A.2
Allison, R.G.3
Chaconas, G.4
-
23
-
-
0025850374
-
Structural aspects of a higher order nucleoprotein complex: Induction of an altered DNA structure at the Mu-host junction of the Mu type 1 transpososome
-
Lavoie BD, Chan BS, Allison RG, Chaconas G (1991) Structural aspects of a higher order nucleoprotein complex: induction of an altered DNA structure at the Mu-host junction of the Mu type 1 transpososome. EMBO J 10: 3051-3059
-
(1991)
EMBO J
, vol.10
, pp. 3051-3059
-
-
Lavoie, B.D.1
Chan, B.S.2
Allison, R.G.3
Chaconas, G.4
-
24
-
-
0037785140
-
The conserved CA/TG motif at Mu termini: T specifies stable transpososome assembly
-
Lee I, Harshey RM (2003) The conserved CA/TG motif at Mu termini: T specifies stable transpososome assembly. J Mol Biol 330: 261-275
-
(2003)
J Mol Biol
, vol.330
, pp. 261-275
-
-
Lee, I.1
Harshey, R.M.2
-
25
-
-
0028352363
-
Intermolecular disintegration and intramolecular strand transfer activities of wild-type and mutant HIV-1 integrase
-
Mazumder A, Engelman A, Craigie R, Fesen M, Pommier Y (1994) Intermolecular disintegration and intramolecular strand transfer activities of wild-type and mutant HIV-1 integrase. Nucleic Acids Res 22: 1037-1043
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 1037-1043
-
-
Mazumder, A.1
Engelman, A.2
Craigie, R.3
Fesen, M.4
Pommier, Y.5
-
26
-
-
0034625261
-
RAG1/2-mediated resolution of transposition intermediates: Two pathways and possible consequences
-
Melek M, Gellert M (2000) RAG1/2-mediated resolution of transposition intermediates: two pathways and possible consequences. Cell 101: 625-633
-
(2000)
Cell
, vol.101
, pp. 625-633
-
-
Melek, M.1
Gellert, M.2
-
27
-
-
0030628279
-
Polynucleotidyl transfer reactions in site-specific DNA recombination
-
Mizuuchi K (1997) Polynucleotidyl transfer reactions in site-specific DNA recombination. Genes Cells 2: 1-12
-
(1997)
Genes Cells
, vol.2
, pp. 1-12
-
-
Mizuuchi, K.1
-
28
-
-
0026708067
-
Assembly of the active form of the transposase-Mu DNA complex: A critical control point in Mu transposition
-
Mizuuchi M, Baker TA, Mizuuchi K (1992) Assembly of the active form of the transposase-Mu DNA complex: a critical control point in Mu transposition. Cell 70: 303-311
-
(1992)
Cell
, vol.70
, pp. 303-311
-
-
Mizuuchi, M.1
Baker, T.A.2
Mizuuchi, K.3
-
30
-
-
0032125708
-
The same two monomers within a MuA tetramer provide the DDE domains for the strand cleavage and strand transfer steps of transposition
-
Namgoong SY, Harshey RM (1998) The same two monomers within a MuA tetramer provide the DDE domains for the strand cleavage and strand transfer steps of transposition. EMBO J 17: 3775-3785
-
(1998)
EMBO J
, vol.17
, pp. 3775-3785
-
-
Namgoong, S.Y.1
Harshey, R.M.2
-
31
-
-
0018857680
-
Selfish DNA: The ultimate parasite
-
Orgel LE, Crick FH (1980) Selfish DNA: the ultimate parasite. Nature 284: 604-607
-
(1980)
Nature
, vol.284
, pp. 604-607
-
-
Orgel, L.E.1
Crick, F.H.2
-
32
-
-
0030598356
-
IS911-mediated transpositional recombination in vitro
-
Polard P, Ton-Hoang B, Haren L, Betermier M, Walczak R, Chandler M (1996) IS911-mediated transpositional recombination in vitro. J Mol Biol 264: 68-81
-
(1996)
J Mol Biol
, vol.264
, pp. 68-81
-
-
Polard, P.1
Ton-Hoang, B.2
Haren, L.3
Betermier, M.4
Walczak, R.5
Chandler, M.6
-
33
-
-
0029129435
-
Structure of the bacteriophage Mu transposase core: A common structural motif for DNA transposition and retroviral integration
-
Rice P, Mizuuchi K (1995) Structure of the bacteriophage Mu transposase core: a common structural motif for DNA transposition and retroviral integration. Cell 82: 209-220
-
(1995)
Cell
, vol.82
, pp. 209-220
-
-
Rice, P.1
Mizuuchi, K.2
-
34
-
-
0029986753
-
Mu transpositional recombination: Donor DNA cleavage and strand transfer in trans by the Mu transposase
-
Savilahti H, Mizuuchi K (1996) Mu transpositional recombination: donor DNA cleavage and strand transfer in trans by the Mu transposase. Cell 85: 271-280
-
(1996)
Cell
, vol.85
, pp. 271-280
-
-
Savilahti, H.1
Mizuuchi, K.2
-
35
-
-
0029096898
-
The phage Mu transpososome core: DNA requirements for assembly and function
-
Savilahti H, Rice PA, Mizuuchi K (1995) The phage Mu transpososome core: DNA requirements for assembly and function. EMBO J 14: 4893-4903
-
(1995)
EMBO J
, vol.14
, pp. 4893-4903
-
-
Savilahti, H.1
Rice, P.A.2
Mizuuchi, K.3
-
36
-
-
0344874233
-
DNA mismatches and GC-rich motifs target transposition by the RAG1/RAG2 transposase
-
Tsai CL, Chatterji M, Schatz DG (2003) DNA mismatches and GC-rich motifs target transposition by the RAG1/RAG2 transposase. Nucleic Acids Res 31: 6180-6190
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 6180-6190
-
-
Tsai, C.L.1
Chatterji, M.2
Schatz, D.G.3
-
37
-
-
0029870895
-
Kinetic and structural probing of the precleavage synaptic complex (type 0) formed during phage Mu transposition. Action of metal ions and reagents specific to single-stranded DNA
-
Wang Z, Namgoong SY, Zhang X, Harshey RM (1996) Kinetic and structural probing of the precleavage synaptic complex (type 0) formed during phage Mu transposition. Action of metal ions and reagents specific to single-stranded DNA. J Biol Chem 271: 9619-9626
-
(1996)
J Biol Chem
, vol.271
, pp. 9619-9626
-
-
Wang, Z.1
Namgoong, S.Y.2
Zhang, X.3
Harshey, R.M.4
-
38
-
-
0033569428
-
Organization and dynamics of the Mu transpososome: Recombination by communication between two active sites
-
Williams TL, Jackson EL, Carritte A, Baker TA (1999) Organization and dynamics of the Mu transpososome: recombination by communication between two active sites. Genes Dev 13: 2725-2737
-
(1999)
Genes Dev
, vol.13
, pp. 2725-2737
-
-
Williams, T.L.1
Jackson, E.L.2
Carritte, A.3
Baker, T.A.4
-
39
-
-
0037143709
-
Mismatch-targeted transposition of Mu: A new strategy to map genetic polymorphism
-
Yanagihara K, Mizuuchi K (2002) Mismatch-targeted transposition of Mu: a new strategy to map genetic polymorphism. Proc Natl Acad Sci USA 99: 11317-11321
-
(2002)
Proc Natl Acad Sci USA
, vol.99
, pp. 11317-11321
-
-
Yanagihara, K.1
Mizuuchi, K.2
|