Detection of hepatitis D virus by cDNA microarray method

Hepatobiliary and Pancreatic Diseases International

Volumn 3, Issue 3, 2004, Pages 423-427

  Sun, Zhao Hui ^a,b   Zheng, Wen Ling ^a   Zhang, Bao ^b   Lu, Liang ^b   Mao, Xiao Dong ^b   Shi, Rong ^b   Ma, Wen Li ^b  

^a GUANGZHOU GENERAL HOSPITAL OF GUANGZHOU MILITARY COMMAND   (China)

^b INSTITUTE OF MOLECULAR BIOLOGY   (Armenia)

Author keywords

Hepatitis D virus; Hybridization; Microarray; PCR

Indexed keywords

COMPLEMENTARY DNA; GLASS;

ARTICLE; CONTROLLED STUDY; DELTA AGENT HEPATITIS; DIAGNOSTIC PROCEDURE; DISPLAY SYSTEM; DNA HYBRIDIZATION; DNA MICROARRAY; GENE CONSTRUCT; GENETIC CONSERVATION; HEPATITIS DELTA VIRUS; HUMAN; HUMAN CELL; NONHUMAN; POLYMERASE CHAIN REACTION; ROBOTICS; SENSITIVITY AND SPECIFICITY; SEQUENCE ALIGNMENT; SIGNAL TRANSDUCTION; VIRUS DETECTION;

BASE SEQUENCE; CONSERVED SEQUENCE; GLASS; HEPATITIS D; HEPATITIS DELTA VIRUS; HUMANS; MOLECULAR SEQUENCE DATA; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; ROBOTICS; SENSITIVITY AND SPECIFICITY;

EID: 4444342774     PISSN: 14993872     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (40)

1. Liu XF, Zou SQ, Qiu FZ. Pathogenesis of cholangiocarcinoma in the porta hepatis and infection of hepatitis virus. Hepatobiliary Pancreat Dis Int 2003;2:285-289.
2. Bean P. Latest discoveries on the infection and coinfection with hepatitis D virus, Am Clin Lab 2002;21:25-27.
3. Lok AS, Heathcote EJ, Hoofnagle JH. Management of hepatitis B: 2000-summary of a workshop. Gastroenterology 2001; 120:1828-1853.
4. Elefsiniotis IS, Diamantis ID, Dourakis SP, Kafiri G, Pantazis K, Mavrogiannis C. Anticardiolipin antibodies in chronic hepatitis B and chronic hepatitis D infection, and hepatitis B-related hepatocellular carcinoma. Relationship with portal vein thrombosis. Eur J Gastroenterol Hepatol 2003;15:721-726.
5. Tang LL, Liu KZ. Recent advances in DNA vaccine of hepatitis virus. Hepatobiliary Pancreat Dis Int 2002;1:228-231.
6. Jay H, Adrian M. The Treatment of chronic viral hepatitis. New England J Med 1997;336:347-356.
7. Tanikawa K. Pathogenesis and treatment of hepatitis C virus-related liver diseases. Hepatobiliary Pancreat Dis Int 2004;3:17-20.
8. Louisirirotchanakul S, Myint KS, Srimee B, Kanoksinsombat C, Khamboonruang C, Kunstadter P, et al. The prevalence of viral hepatitis among the Hmong people of northern Thailand. Southeast Asian J Trop Med Public Health 2002;33:837-844.
9. Jean MP. Molecular diagnosis of viral hepatitis. Gastroenterology 2002;122:1554-1568.
10. Micheal DK, Timothy AJ, Craig RS, Jia L, Jeffrey DT, Steven JM. Assessment of the sensitivity and specificity of oligonucleotide (50mer) microarray. Nucleic Acids Res 2001;28: 2552-4557.
11. Hegde P, Abermathy RQK, Gay S, Dharap S, Gaspard R, Hughes JE, et al. A concise guide to cDNA microarray analysis. BioTcechnique 2000;29:548-562.
12. Lu SN, Chen TM, Lee CM, Wang JH, Tung HD, Wu JC. Molecular epidemiological and clinical aspects of hepatitis D virus in a unique triple hepatitis viruses (B, C, D) endemic community in Taiwan. J Med Virol 2003;70:74-80.
13. Shih KN, Chuang YT, Liu H, Lo SJ. Hepatitis D virus RNA editing is inhibited by a GFP fusion protein containing a C-terminally deleted delta antigen. J Gen Virol 2004;85:947-957.
14. Chlabicz S, Grzeszczuk A, Lapinski TW, Prokopowicz D, Panasiuk A. Search for hepatitis delta virus (HDV) infection in hepatitis C patients in north-eastern Poland. Comparison with anti-HDV prevalence in chronic hepatitis B. Eur J Epidemiol 2003;18:559-561.
15. Joh R, Hasegawa K, Tokushige K, Hashimoto E, Torii N, Yamashiro T, et al. Chronic hepatitis B with flare due to co-infection of hepatitis delta virus during lamivudine therapy. Intern Med 2003;42:581-586.
16. Porres JC, Carreno V, Bartolome J, Moreno A, Galiana F, Quiroga JA. Treatment of chronic delta infection with recombinant interferon alpha 2c at high doses. J Hepatol 1989;9:338-344.
17. Watanabe H, Nagayama K, Enomoto N, Chinzei R, Yamashiro T, Izumi N, et al. Chronic hepatitis delta virus infection with genotype IIb variant is correlated with progressive liver disease. J Gen Virol 2003;84:3275-3289.
18. Grigorescu M, Pascu O, Acalovschi M, Radu C. What is the real prevalence of the D virus infection in chronic hepatitis and liver cirrhosis in Romania? Rom J Gastroenterol 2003;12:179-182.
19. Cornillez-Ty CT, Lazinski DW. Determination of the multime-rization state of the hepatitis delta virus antigens in vivo. J Virol 2003;77:10314-10326.
20. Fang F, Wang HL, Ye P, Deng HL, Dong GL, Ma LL, et al. Detection of autoantibodies in the serum of primary hepatocarcinoma patients. Hepatobiliary Pancreat Dis Int 2002;1:94-95.
21. Lu J, Zhao HL, Meng QL, Liao SD, Wang Y, Jiang YZ. Detection of anti-MHAV and anti-MHEV IgM in patients with sporadic acute hepatitis in Beijing between 1995-2000. Hepatobiliary Pancreat Dis Int 2002;1:83-86.
22. Xie Y, Zhao H, Dai WS, Xu DZ. HBV DNA level and antigen concentration in evaluating liver damage of patients with chronic hepatitis B. Hepatobiliary Pancreat Dis Int 2003;2:418-422.
23. Yamashiro T, Nagayama K, Enomoto N, Watanabe H, Miyagi T, Nakasone H, et al. Quantitation of the level of hepatitis delta virus RNA in serum, by real-time polymerase chain reaction - and its possible correlation with the clinical stage of liver disease. J Infect Dis 2004;189:1151-1157.
24. Ji KW, Xian EZ, Zhi C, Hong L, Ya FZ, Zhi PZ, et al. A visual DNA chip for simultaneous detection of hepatitis B virus, hepatitis C virus and human immunodeficiency virus type-1. Biosensors Bioelectronics 2004;19:685-692.
25. Agnes P, David D, Magali P, Philippe C, Bernard M. A combind oligonucleotide and protein microarray for the codetection of nucleic acids and antibodies associated with human immunodeficiency virus, hepatitis B virus, and hepatitis C virus infection. Anal Biochem 2003;322:148-155.
26. Kawaguchi K, Kaneko S, Honda M, Hiroshi FK, Yukihiro S, Kenichi K. Detection of hepatitis B virus DNA in sera from patients with chronic hepatitis B virus infection by DNA microarray method. J Clin Microbiol 2003;41:1701-1704.
27. Ma WL, Zheng WL. The development of DNA Microarry. Sci Found China 1999;13:270-273.
28. Sun ZH, Ma WL, Zheng WL. Microarrays development in the diagnosis of HBV and HCV. Med J Chin PLA 2003;28: 375-376.
29. Petrik J. Microarray technology: the future of blood testing? Vox Sanguinis 2001;80:1-11.
30. Zhao W, Wan JM, Liu W, Liu QJ, Zhang L, Zhou ZX, et al. Hepatitis gene chip in detecting HBV DNA, HCV RNA in serum and liver tissue samples of hepatitis patients. Hepatobiliary Pancreat Dis Int 2003;2:234-241.
31. Zhao W, Wan JM, Liu W, Liu QJ, Zhang L, Zhou ZX, et al. Hepatitis gene chip in detecting HBV DNA, HCV RNA in serum and liver tissue samples of hepatitis patients. Hepatobiliary Pancreat Dis Int 2003;2:234-241.
32. Falus A, Varadi A, Rasko I. The DNA chip, a new tool for medical genetics. Orv Hetil 1998;139:957-960.
33. Ma WL, Zheng WL, James FB. RD-PCR: A new technique of differential display. In: Sun YX. The development of biochemistry and molecular biology in PLA[M]. Beijing: Uniform Medical Publishing 1998;99-113.
34. Zheng W, Ma W, Waes CV. The differential display of poly A polymerase in tumor cells of differential malignancy. In: Ye XS et al. , Eds. Investigation on cell modulation (in Chinese). [M] Beijing: Uniform Medical Publishing 1998;73-79.
35. Li L, Ma WL, Zhu JI, Zhu LN, Song YB, Wu QH, et al. Preparation of HIV genechip probes by RD-PCR technology. Chin J Biochem Mol Biol 2002;18:105-109.
36. Mao XM, Ma WL, Jiang L, Zheng WL. Application of restriction display PCR in preparing the probes of the gene chip for investigating gene expression profile of K562 cells. J First Mil Med Univ 2002;22:548-553.
37. Zhu JI, Ma WL, Yao LH, Li L, Song YB, Zheng WL. Probes-preparation of cDNA microarray for the gene expression in leukemia K562 cell using restriction cDNA library. J Res Life Sci 2002;2:42-146.
38. 3 treatment. J First Mil Med Univ 2002;22:772-774.
39. Zhang B, Ma WL, Hu ZY, Shi R, Song YB, Zheng WL. A method for evaluation of the quality of DNA microarray spots. J Biochem Mol Biol 2002;35:532-535.
40. Li L, Ma WL, Zhu J, Rong S, Cui HL, Jin KC, et al. A modified restriction display PCR method in sample-labelling of DNA microarray. J Virological Methods 2003;114:71-75.