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Volumn 43, Issue 6, 2008, Pages 1171-1179

Metabolic stereoselectivity of cytochrome P450 3A4 towards deoxypodophyllotoxin: In silico predictions and experimental validation

Author keywords

Automated docking; Cytochrome P450 3A4 (EC 1.14.14.1); Drug metabolism; Epipodophyllotoxin; Lignans

Indexed keywords

CYTOCHROME P450 3A4; DEMETHYLENEDEOXYPODOPHYLLOTOXIN; DEMETHYLENEPODOPHYLLOTOXIN; DEOXYPODOPHYLLOTOXIN; EPIPODOPHYLLOTOXIN; HYDROGEN; LIGNAN DERIVATIVE; MICONAZOLE; PODOPHYLLOTOXIN; TESTOSTERONE;

EID: 44349130284     PISSN: 02235234     EISSN: 17683254     Source Type: Journal    
DOI: 10.1016/j.ejmech.2007.09.005     Document Type: Article
Times cited : (26)

References (24)
  • 1
    • 1942497956 scopus 로고    scopus 로고
    • Cytochromes P450, drugs, and diseases
    • Guengerich F.P. Cytochromes P450, drugs, and diseases. Mol. Interv. 3 (2003) 194-204
    • (2003) Mol. Interv. , vol.3 , pp. 194-204
    • Guengerich, F.P.1
  • 2
    • 4644301430 scopus 로고    scopus 로고
    • The structure of human microsomal cytochrome P450 3A4 determined by X-ray crystallography to 2.05-Å resolution
    • Yano J.K., Wester M.R., Schoch G.A., Griffin K.J., Stout C.D., and Johnson E.F. The structure of human microsomal cytochrome P450 3A4 determined by X-ray crystallography to 2.05-Å resolution. J. Biol. Chem. 279 (2004) 38091-38094
    • (2004) J. Biol. Chem. , vol.279 , pp. 38091-38094
    • Yano, J.K.1    Wester, M.R.2    Schoch, G.A.3    Griffin, K.J.4    Stout, C.D.5    Johnson, E.F.6
  • 3
    • 4043121827 scopus 로고    scopus 로고
    • Podophyllotoxin: distribution, sources, applications and new cytotoxic derivatives
    • Gordaliza M., Garcia P.A., del Corral J.M., Castro M.A., and Gomez-Zurita M.A. Podophyllotoxin: distribution, sources, applications and new cytotoxic derivatives. Toxicon 44 (2004) 441-459
    • (2004) Toxicon , vol.44 , pp. 441-459
    • Gordaliza, M.1    Garcia, P.A.2    del Corral, J.M.3    Castro, M.A.4    Gomez-Zurita, M.A.5
  • 4
    • 0034010065 scopus 로고    scopus 로고
    • Conservation threats to some important medicinal plants of the Sikkim Himalaya
    • Rai L.K., Prasad P., and Sharma E. Conservation threats to some important medicinal plants of the Sikkim Himalaya. Biol. Conserv. 93 (2000) 27-33
    • (2000) Biol. Conserv. , vol.93 , pp. 27-33
    • Rai, L.K.1    Prasad, P.2    Sharma, E.3
  • 6
    • 0035671972 scopus 로고    scopus 로고
    • A fast and simple GC-MS method for lignan profiling in Anthriscus sylvestris and biosynthetically related plant species
    • Koulman A., Bos R., Medarde M., Pras N., and Quax W.J. A fast and simple GC-MS method for lignan profiling in Anthriscus sylvestris and biosynthetically related plant species. Planta Med. 67 (2001) 858-862
    • (2001) Planta Med. , vol.67 , pp. 858-862
    • Koulman, A.1    Bos, R.2    Medarde, M.3    Pras, N.4    Quax, W.J.5
  • 7
    • 0030933558 scopus 로고    scopus 로고
    • The large scale isolation of deoxypodophyllotoxin from rhizomes of Anthriscus sylvestris followed by its bioconversion into 5-methoxypodophyllotoxin b-d-glucoside by cell cultures of Linum flavum
    • Van Uden W., Bos J.A., Boeke G.M., Woerdenbag H.J., and Pras N. The large scale isolation of deoxypodophyllotoxin from rhizomes of Anthriscus sylvestris followed by its bioconversion into 5-methoxypodophyllotoxin b-d-glucoside by cell cultures of Linum flavum. J. Nat. Prod. 60 (1997) 401-403
    • (1997) J. Nat. Prod. , vol.60 , pp. 401-403
    • Van Uden, W.1    Bos, J.A.2    Boeke, G.M.3    Woerdenbag, H.J.4    Pras, N.5
  • 9
    • 0036223831 scopus 로고    scopus 로고
    • Summary of information on human CYP enzymes: human P450 metabolism data
    • Rendic S. Summary of information on human CYP enzymes: human P450 metabolism data. Drug Metab. Rev. 34 (2002) 83-448
    • (2002) Drug Metab. Rev. , vol.34 , pp. 83-448
    • Rendic, S.1
  • 10
    • 14644439295 scopus 로고    scopus 로고
    • Metabolite-cytochrome P450 complex formation by methylenedioxyphenyl lignans of Piper cubeba: mechanism-based inhibition
    • Usia T., Watabe T., Kadota S., and Tezuka Y. Metabolite-cytochrome P450 complex formation by methylenedioxyphenyl lignans of Piper cubeba: mechanism-based inhibition. Life Sci. 76 (2005) 2381-2391
    • (2005) Life Sci. , vol.76 , pp. 2381-2391
    • Usia, T.1    Watabe, T.2    Kadota, S.3    Tezuka, Y.4
  • 11
    • 2442690439 scopus 로고    scopus 로고
    • Validated assays for human cytochrome P450 activities
    • Walsky R.L., and Obach R.S. Validated assays for human cytochrome P450 activities. Drug Metab. Dispos. 32 (2004) 647-660
    • (2004) Drug Metab. Dispos. , vol.32 , pp. 647-660
    • Walsky, R.L.1    Obach, R.S.2
  • 12
    • 24944576037 scopus 로고    scopus 로고
    • Effect of antifungal drugs on cytochrome P450 (CYP) 2C9, CYP2C19, and CYP3A4 activities in human liver microsomes
    • Niwa T., Shiraga T., and Takagi A. Effect of antifungal drugs on cytochrome P450 (CYP) 2C9, CYP2C19, and CYP3A4 activities in human liver microsomes. Biol. Pharm. Bull. 28 (2005) 1805-1808
    • (2005) Biol. Pharm. Bull. , vol.28 , pp. 1805-1808
    • Niwa, T.1    Shiraga, T.2    Takagi, A.3
  • 14
    • 0015157025 scopus 로고
    • The enzymatic formation of methylenedioxyphenyl derivative exhibiting an isocyanide-like spectrum with reduced cytochrome P450 in hepatic microsomes
    • Franklin M.R. The enzymatic formation of methylenedioxyphenyl derivative exhibiting an isocyanide-like spectrum with reduced cytochrome P450 in hepatic microsomes. Xenobiotica 1 (1971) 581-591
    • (1971) Xenobiotica , vol.1 , pp. 581-591
    • Franklin, M.R.1
  • 15
    • 0015215094 scopus 로고
    • A cytochrome P-450 piperonyl butoxide spectrum similar to that produced by ethyl isocyanide
    • Philpot R.M., and Hodgson E. A cytochrome P-450 piperonyl butoxide spectrum similar to that produced by ethyl isocyanide. Life Sci. 10 (1971) 503-512
    • (1971) Life Sci. , vol.10 , pp. 503-512
    • Philpot, R.M.1    Hodgson, E.2
  • 16
    • 0030843652 scopus 로고    scopus 로고
    • Drug metabolism by Escherichia coli expressing human cytochromes P450
    • Parikh A., Gillam E.M., and Guengerich F.P. Drug metabolism by Escherichia coli expressing human cytochromes P450. Nat. Biotechnol. 15 (1997) 784-788
    • (1997) Nat. Biotechnol. , vol.15 , pp. 784-788
    • Parikh, A.1    Gillam, E.M.2    Guengerich, F.P.3
  • 17
    • 78651165715 scopus 로고
    • The carbon monooxide-binding pigment of liver microsomes. I. Evidence for its hemoprotein nature
    • Omura T., and Sato R. The carbon monooxide-binding pigment of liver microsomes. I. Evidence for its hemoprotein nature. J. Biol. Chem. 239 (1964) 2370-2378
    • (1964) J. Biol. Chem. , vol.239 , pp. 2370-2378
    • Omura, T.1    Sato, R.2
  • 19
    • 0035555863 scopus 로고    scopus 로고
    • Reproducing the conformations of protein-bound ligands: a critical evaluation of several popular conformational searching tools
    • Boström J. Reproducing the conformations of protein-bound ligands: a critical evaluation of several popular conformational searching tools. J. Comput. Aided Mol. Des. 15 (2001) 1137
    • (2001) J. Comput. Aided Mol. Des. , vol.15 , pp. 1137
    • Boström, J.1
  • 20
    • 0347296066 scopus 로고    scopus 로고
    • Assessing the performance of OMEGA with respect to retrieving bioactive conformations
    • Boström J., Greenwood J.R., and Gottfries J. Assessing the performance of OMEGA with respect to retrieving bioactive conformations. J. Mol. Graph. Model. 21 (2003) 449-462
    • (2003) J. Mol. Graph. Model. , vol.21 , pp. 449-462
    • Boström, J.1    Greenwood, J.R.2    Gottfries, J.3
  • 21
    • 84956979675 scopus 로고    scopus 로고
    • Efficient unbound docking of rigid molecules
    • Proceedings of the 2nd Workshop on Algorithms in Bioinformatics (Rome, Italy). Gusfield D., et al. (Ed), Springer Verlag
    • Duhovny D., Nussinov R., and Wolfson H.J. Efficient unbound docking of rigid molecules. In: Gusfield D., et al. (Ed). Proceedings of the 2nd Workshop on Algorithms in Bioinformatics (Rome, Italy). Lecture Notes in Computer Science vol. 2452 (2002), Springer Verlag 185-200
    • (2002) Lecture Notes in Computer Science , vol.2452 , pp. 185-200
    • Duhovny, D.1    Nussinov, R.2    Wolfson, H.J.3
  • 24
    • 34548317146 scopus 로고    scopus 로고
    • FireDock: fast interaction refinement in molecular docking
    • Andrusier N., Nussinov R., and Wolfson H.J. FireDock: fast interaction refinement in molecular docking. Proteins 69 (2007) 139-159
    • (2007) Proteins , vol.69 , pp. 139-159
    • Andrusier, N.1    Nussinov, R.2    Wolfson, H.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.