Functional analysis of bipartite begomovirus coat protein promoter sequences

Virology

Volumn 376, Issue 1, 2008, Pages 79-89

  Lacatus, Gabriela ^a   Sunter, Garry ^a  

^a UNIVERSITY OF TEXAS AT SAN ANTONIO   (United States)

Author keywords

AL2; Binding; Geminivirus; Nuclear factors; Promoter; Repression

Indexed keywords

COAT PROTEIN; NUCLEAR PROTEIN; PROTEIN AL2; VIRUS PROTEIN;

ARTICLE; BEGOMOVIRUS; CABBAGE LEAF CURL VIRUS; CHROMATIN IMMUNOPRECIPITATION; GEMINIVIRUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PLANT VIRUS; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN BINDING; PROTEIN PROTEIN INTERACTION; TOMATO GOLDEN MOSAIC VIRUS;

BEGOMOVIRUS; BRASSICA; CAPSID PROTEINS; CHROMATIN IMMUNOPRECIPITATION; GENE EXPRESSION REGULATION, VIRAL; LYCOPERSICON ESCULENTUM; PROMOTER REGIONS (GENETICS); PROTEIN BINDING; SPINACIA OLERACEA; TOBACCO;

BEGOMOVIRUS; CABBAGE LEAF CURL VIRUS; GEMINIVIRIDAE; LYCOPERSICON ESCULENTUM; NICOTIANA BENTHAMIANA; PEPPER GOLDEN MOSAIC VIRUS; SPINACIA OLERACEA; TOMATO GOLDEN MOSAIC VIRUS; TOMATO YELLOW LEAF CURL VIRUS;

EID: 43749109810     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2008.03.012     Document Type: Article

References (47)

1. Abouzid A.M., Hiebert E., and Strandberg J.O. Cloning, identification and partial sequencing of the genomic components of a geminivirus infecting Brassicaceae. Phytopathology 82 (1992) 1070-1074
2. Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Siedman J.G., Smith J.A., and Struhl K. Current Protocols in Molecular Biology (2001), John Wiley and Sons, New York
3. Bhattacharyya-Pakrasi M., Peng J., Elmer J.S., Laco G., Shen P., Kaniewska M.B., Kononowicz H., Wen F., Hodges T.K., and Beachy R.N. Specificity of a promoter from the rice tungro bacilliform virus for expression in phloem tissues. Plant J. 4 (1993) 71-79
4. Bisaro D.M. Geminivirus replication. In: DePamphilis M. (Ed). DNA Replication in Eukaryotic Cells (1996), Cold Spring Harbor Laboratory Press, Cold Spring Harbor 833-854
5. Briddon R.W., Watts J., Markham P.G., and Stanley J. The coat protein of Beet curly top virus is essential for infectivity. Virology 172 (1989) 628-633
6. Brown J.K., Idris A.M., Ostraw K.M., Goldberg N., French R., and Stenger D.C. Genetic and phenotypic variation of Pepper golden mosaic virus complex. Phytopathology 95 (2005) 1217-1224
7. Elmer J.S., Sunter G., Gardiner W.E., Brand L., Browning C.K., Bisaro D.M., and Rogers S.G. Agrobacterium-mediated inoculation of plants with Tomato golden mosaic virus DNAs. Plant Mol. Biol. 10 (1988) 225-234
8. Gendrel A.-V., Lippman Z., Yordan C., Colot V., and Martienssen R.A. Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1. Science 297 (2002) 1871-1873
9. Gladfelter H.J., Eagle P.A., Fontes E.P.B., Batts L., and Hanley-Bowdoin L. Two domains of the AL1 protein mediate geminivirus origin recognition. Virology 239 (1997) 186-197
10. Grimsley N., Hohn B., Hohn T., and Walden R. "Agroinfection", an alternative route for viral infection of plants using the Ti plasmid. Proc. Natl. Acad. Sci. U. S. A. 83 (1986) 3282-3286
11. Guevara-Garcia A., Mosqueda-Cano G., Arguello-Astorga G., Simpson J., and Herrara-Estrella L. Tissue-specific and wound-inducible pattern of expression of the mannopine synthase promoter is determined by the interaction between positive and negative cis-regulatory elements. Plant J. 4 (1993) 495-505
12. Haley A., Zhan X., Richardson K., Head K., and Morris B. Regulation of the activities of African cassava mosaic virus promoters by the AC1, AC2, and AC3 gene products. Virology 188 (1992) 905-909
13. Hamilton W.D.O., Stein V.E., Coutts R.H.A., and Buck K.W. Complete nucleotide sequence of the infectious cloned DNA components of Tomato golden mosaic virus: Potential coding regions and regulatory sequences. EMBO J. 3 (1984) 2197-2205
14. Hanley-Bowdoin L., Settlage S.B., Orozco B.M., Nagar S., and Robertson D. Geminiviruses: models for plant DNA replication, transcription, and cell cycle regulation. Crit. Rev. Biochem. Mol. Biol. 35 (2000) 105-140
15. Hao L., Wang H., Sunter G., and Bisaro D.M. Geminivirus AL2 and L2 proteins interact with and inactivate SNF1 kinase. Plant Cell 15 (2003) 1034-1048
16. Hartitz M.D., Sunter G., and Bisaro D.M. The geminivirus transactivator (TrAP) is a zinc-binding phosphoprotein with an acidic activation domain. Virology 263 (1999) 1-14
17. Horsch R.B., and Klee H.J. Rapid assay of foreign gene expression in leaf discs transformed by Agrobacterium tumefaciens: role of the T-DNA borders in the transfer process. Proc. Natl. Acad. Sci. U. S. A. 83 (1986) 4428-4432
18. Isakeit T., Idris A.M., Sunter G., Black M.C., and Brown J.K. Tomato yellow leaf curl virus in tomato in Texas. Originating from transplant facilities. Plant Disease 91 (2007) 466
19. Jefferson R.A., Kavanagh T.A., and Bevin M.W. GUS fusions: β-glucuronidase as a sensitive and versatile gene fusion marker in higher plants. EMBO J. 6 (1987) 3901-3907
20. Johansen L.K., and Carrington J.C. Silencing on the spot. Induction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system. Plant Physiol. 126 (2001) 930-938
21. Lai J.S., and Herr W. Interdigitated residues within a small region of VP16 interact with Oct-1, HCF, and DNA. Mol. Cell. Biol. 17 (1997) 3937-3946
22. Noris E., Jupin I., Accotto G.P., and Gronenborn B. DNA-binding activity of the C2 protein of Tomato yellow leaf curl virus. Virology 217 (1996) 607-612
23. Padmanabhan M.S., Shiferaw H., and Culver J.N. The Tobacco mosaic virus replicase protein disrupts the localization and function of interacting Aux/IAA proteins. Mol. Plant-Microbe Interact. 19 (2006) 864-873
24. Preiss W., and Jeske H. Multitasking in replication is common among geminiviruses. J. Virol. 77 (2003) 2972-2980
25. Rogers S.G., Horsch R.B., and Fraley R.T. Gene transfer in plants: Production of transformed plants using Ti plasmid vectors. In: Weissbach A., and Weissbach H. (Eds). Methods in Enzymology 118 (1986), Academic Press, New York 627-640
26. Rogers S.G., Klee H.J., Horsch R.B., and Fraley R.T. Improved vectors for plant transformation: expression cassette vectors and new selectable markers. Methods Enzymol. 153 (1987) 253-277
27. Ruiz-Medrano R., Guevara-Gonzalez R.G., Arguello-Astorga G.R., Monsalve-Fonnegra Z., Herrera-Estrella L.R., and Rivera-Bustamante R.F. Identification of a sequence element involved in AC2-mediated transactivation of the Pepper Huasteco virus coat protein gene. Virology 253 (1999) 162-169
28. Saunders K., and Stanley J. Complementation of African cassava mosaic virus AC2 gene function in a mixed bipartite geminivirus infection. J. Gen. Virol. 76 (1995) 2287-2292
29. Séguin A., Laible G., Leyva A., Dixon R.A., and Lamb C.J. Characterization of a gene encoding a DNA-binding protein that interacts in vitro with vascular specific cis elements of the phenylalanine ammonia-lyase promoter. Plant Mol. Biol. 35 (1997) 281-291
30. Shivaprasad P.V., Akbergenov R., Trinks D., Rajeswaran R., Veluthambi K., Hohn T., and Pooggin M.M. Promoters, transcripts, and regulatory proteins of Mungbean yellow mosaic geminivirus. J. Virol. 79 (2005) 8149-8163
31. Shung C.-Y., and Sunter G. AL1-dependent repression of transcription enhances expression of Tomato golden mosaic virus AL2 and AL3. Virology 364 (2007) 112-122
32. Shung C.-Y., Sunter J., Sirasanagandla S.S., and Sunter G. Distinct viral sequence elements are necessary for expression of Tomato golden mosaic virus complementary sense transcripts that direct AL2 and AL3 gene expression. Mol. Plant-Microbe Interact. 19 (2006) 1394-1405
33. Stenger D.C., Revington G.N., Stevenson M.C., and Bisaro D.M. Replicational release of geminivirus genomes from tandemly repeated copies: evidence for rolling circle replication of a plant viral DNA. Proc. Natl. Acad. Sci. U. S. A. 88 (1991) 8029-8033
34. Sung Y.K., and Coutts R.H.A. Pseudorecombination and complementation between Potato yellow mosaic geminivirus and Tomato golden mosaic geminivirus. J. Gen. Virol. 76 (1995) 2809-2815
35. Sung Y.K., and Coutts R.H.A. Potato yellow mosaic virus AC2 protein is a sequence non-specific DNA binding protein. FEBS Lett. 383 (1996) 51-54
36. Sunter G., and Bisaro D.M. Transactivation in a geminivirus: AL2 gene product is needed for coat protein expression. Virology 180 (1991) 416-419
37. Sunter G., and Bisaro D.M. Transactivation of geminivirus AR1 and BR1 gene expression by the viral AL2 gene product occurs at the level of transcription. Plant Cell 4 (1992) 1321-1331
38. Sunter G., and Bisaro D.M. Regulation of a geminivirus coat protein promoter by AL2 protein (TrAP): evidence for activation and derepression mechanisms. Virology 232 (1997) 269-280
39. Sunter G., and Bisaro D.M. Identification of a minimal sequence required for activation of the Tomato golden mosaic virus coat protein promoter in protoplasts. Virology 305 (2003) 452-462
40. Sunter G., Stenger D.C., and Bisaro D.M. Heterologous complementation by geminivirus AL2 and AL3 genes. Virology 203 (1994) 203-210
41. Sunter G., Sunter J.L., and Bisaro D.M. Plants expressing Tomato golden mosaic virus AL2 or Beet curly top virus L2 transgenes show enhanced susceptibility to infection by DNA and RNA viruses. Virology 285 (2001) 59-70
42. Tu J., and Sunter G. A conserved binding site within the Tomato golden mosaic virus AL-1629 promoter is necessary for expression of viral genes important for pathogenesis. Virology 367 (2007) 117-125
43. Wang H., Hao L., Shung C.-Y., Sunter G., and Bisaro D.M. Adenosine kinase is inactivated by geminivirus AL2 and L2 proteins. Plant Cell 15 (2003) 3020-3032
44. Wang H., Buckley K.J., Yang X., Buchmann R.C., and Bisaro D.M. Adenosine kinase inhibition and suppression of RNA silencing by geminivirus AL2 and L2 proteins. J. Virol. 79 (2005) 7410-7418
45. Yang X., Baliji S., Buchmann R.C., Wang H., Lindbo J.A., Sunter G., and Bisaro D.M. Functional modulation of the geminivirus AL2 transcription factor and silencing suppressor by self-interaction. J. Virol. 81 (2007) 11972-11981
46. Yant S.R., Zhu W., Millinoff D., Slightom J.L., Goodman M., and Gumucio D.L. High affinity YY1 binding motifs: identification of two core types (ACAT and CCAT) and distribution of potential binding sites within the human beta globin cluster. Nucleic Acids Res. 23 (1995) 4353-4362
47. Zhang Q., Yao H., Vo N., and Goodman R.H. Acetylation of adenovirus E1A regulates binding of the transcriptional corepressor CtBP. Proc. Natl. Acad. Sci. U. S. A. 97 (2000) 14323-14328