Allelopathic enhancement and differential gene expression in rice under low nitrogen treatment

Journal of Chemical Ecology

Volumn 34, Issue 5, 2008, Pages 688-695

  Song, Biqing ^a,b   Xiong, Jun ^a,b   Fang, Changxun ^a,b   Qiu, Long ^a,b   Lin, Riyu ^a,b   Liang, Yiyuan ^a,b   Lin, Wenxiong ^a,b  

^a FUJIAN AGRICULTURE AND FORESTRY UNIVERSITY   (China)

^b FAFU   (China)

Author keywords

Gene expression; Low nitrogen; Real time PCR; Rice allelopathy; Suppression subtractive hybridization (SSH)

Indexed keywords

NITROGEN; PRIMER DNA;

ALLELOCHEMICAL; ALLELOPATHY; GENE EXPRESSION; HYBRIDIZATION; HYDROPONICS; METABOLISM; NITROGEN; NUTRIENT AVAILABILITY; POLYMERASE CHAIN REACTION; REAL TIME; RICE; WEED CONTROL;

ARTICLE; GENE; GENE EXPRESSION; GENETICS; NUCLEIC ACID HYBRIDIZATION; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; RICE; UPREGULATION;

BASE SEQUENCE; DNA PRIMERS; GENE EXPRESSION; GENES, PLANT; NITROGEN; NUCLEIC ACID HYBRIDIZATION; ORYZA SATIVA; POLYMERASE CHAIN REACTION; UP-REGULATION;

ECHINOCHLOA;

EID: 43449127767     PISSN: 00980331     EISSN: 15731561     Source Type: Journal    
DOI: 10.1007/s10886-008-9455-x     Document Type: Article

References (40)

1. An, M., Liu, D. L., Johnson, I. R., and Lovett, J. V. 2003. Mathematical modelling of allelopathy: II. The dynamics of allelochemicals from living plants in the environment. Ecol. Model 161:53-66.
2. Anterola, A. M., Jeon, J. H., Davin, L. B., and Lewis, N. G. 2002. Transcriptional control of monolignol biosynthesis in Pinus taeda: factors affecting monolignol ratios and carbon allocation in phenylpropanoid metabolism. J. Biol. Chem 277:18272-18280.
3. Bauwe, H., and Kolukisaoglu, U. 2003. Genetic manipulation of glycine decarboxylation. J. Exp. Bot 54:1523-1535.
4. Belz, R. G. 2007. Allelopathy in crop/weed interactions - an update. Pest Manag. Sci 63:308-326.
5. Belz, R. G., and Hurle, K. 2004. A novel laboratory screening bioassay for crop seedling allelopathy. J. Chem. Ecol 30:175-198.
6. Bi, H. H., Zeng, R. S., Su, L. M., An, M., and Luo, S. M. 2007. Rice allelopathy induced by methyl jasmonate and methyl salicylate. J. Chem. Ecol 35:1089-1103.
7. Bryant, J. P., Chapin, F. S. III, Reichardt, P. B., and Clausen, T. P. 1987. Response of winter chemical defense in Alaska paper birch and green alder to manipulation of plant carbon/nutrient balance. Oecologia 72:510-514.
8. Chishake, N., and Horiguchi, T. 1997. Responses of secondary metabolism in plants to nutrient defiency. Soil Plant Nutr 43:987-991.
9. Diatchenko, L., Lau, Y. F. C., Campbell, A. P., Chenchik, A., Moqadam, F., Huang, B., Lukyanov, S., Lukyanov, K., Gurskaya, N., Sverslov, E. D., and Siebert, P. D. 1996. Suppression subtractive hybridization: A method for generating differentially regulated or tissue-specific cDNA probes and libraries. Proc. Natl. Acad. Sci. USA 93:6025-6030.
10. Dixon, R. A., and Paiva, N. L. 1995. Stress-induced phenylpropanoid metabolism. Plant Cell 7:1085-1097.
11. Dixon, R. A., Achnine, L., Kota, P., Liu, C. J., Reddy, M. S. S., and Wang, L. J. 2002. The phenylpropanoid pathway and plant defense-a genomics perspective. Mol. Plant Pathol 3:371-390.
12. Einhellig, F. A. 1999. An integrated view of allelochemicals amid multiple stress, pp. 479-494, in Ingerjit, K. M. M. Dakshini, and C. L. Foy (eds.). Principles and practices of plant ecology: Allelochemical InteractionsCRC Press LLC, Boca Raton, FL.
13. Elias, M., Potock, M., Cvrokova, F., and Zarsky, V. 2002. Molecular diversity of phospholipase D in angiosperms. BMC Genomics 3:1471-2164.
14. 2 environments on production of carbon-based allelochemicals in plantago: A test of the carbon/nutrient balance. Am. Nat 140:702-723.
15. Friebe, A. 2006. Brassinosteroids in induced resistance and induction of tolerance to abiotic stress in plants, pp. 233-242, in A. M. Rimando, and S. O. Duke (eds.). Natural Products for Pest ManagementAmerican Chemical Society, Washington, DCACS Symposium Series No. 927.
16. Fritz, C., Palacios-Rojas, N., Feil, R., and Stitt, M. 2006. Regulation of secondary metabolism by the carbon-nitrogen status in tobacco: nitrate inhibits large sectors of phenylpropanoid metabolism. Plant J 46:533-548.
17. He, H. Q., Shen, L. H., Xiong, J., Jia, X. L., Lin, W. X., and Wu, H. 2004. Conditional genetic effect of Allelopathy in rice (Oryza sativa L.) under different environmental conditions. Plant Growth Regul 44:211-218.
18. Kasai, T., Inoue, M., Koshiba, S., Yabuki, T., Aoki, M., Nunokawa, E., Seki, E., Matsuda, T., Matsuda, N., Tomo, Y., Shirouzu, M., Terada, T., Obayashi, N., Hamana, H., Shinya, N., Tatsuguchi, A., Yasuda, S., Yoshida, M., Hirota, H., Matsuo, Y., Tani, K., Suzuki, H., Arakawa, T., Carninci, P., Kawai, J., Hayashizaki, Y., Kigawa, T., and Yokoyama, S. 2004. Solution structure of a BolA-like protein from Mus musculus. Protein Sci 13:545-548.
19. Kim, K. U., Shin, D. H., Lee, I. J., and Kim, H. Y. 2000. Rice Allelopathy in Korea, pp. 57-82, in K.U. Kim, and D.H. Shin (eds.). Rice AllelopathyChan-Suk Park Publish, Korea.
20. Kim, S. Y., Madrid, A. V., Park, S. T., Yang, S. J., and Olofsdotter, M. 2005. Evaluation of rice allelopathy in hydroponics. Weed Res 45:74-79.
21. Kovacik, J., Klejdus, B., Backor, M., and Repca, M. 2007. Phenylalanine ammonia-lyase activity and phenolic compounds accumulation in nitrogen-deficient Matricaria chamomilla leaf rosettes. Plant Sci 172:393-399.
22. Li, L., Popko, J. L., Zhang, X. H., Osakabe, K., Tsai, C. J., Joshi, C. P., and Chiang, V. 1997. A novel mutifuctional O-methyltransferase implicated in a dual methylation pathway associated with lignin biosynthesis in loblolly pine. Proc. Natl. Acad. Sci. USA 94:5461-5466.
23. Liu, J. S., Xie, J., Yang, W. D., and Li, L. X. 2006. Allelopathic effect of alexandrium tamarense on prorocentrum donghaiense under limited nutrient conditions. J. Trop. Subt. Bota 14:207-212(in Chinese).
24. Luo, Q., Michaelis, C., and Weeks, G. 1994. Overexpression of a truncated cyclin B gene arrests Dictyostelium cell division during mitosis. J. Cell Sci 107:3105-3114.
25. Macias, F. A., Molinillo, J. M. G., Varela, R. M., and Galindo, J. C. G. 2007. Allelopathy - a natural alternative for weed control. Pest Manag. Sci 63:327-348.
26. Mihaliak, C. A., Gershenzon, J., and Croteau, R. 1991. Lack of rapid monoterpene turnover in rooted plants: implication of theories of plant defense. Oecologia 87:373-376.
27. Olofsdotter, M. 1998. Allelopathy in rice, pp. 1-5, in M. Olofsdotter (ed.). Allelopathy in RiceInternational Rice Research Institute, Manila, Philippines.
28. Olofsdotter, M., Jensen, L. B., Pamplona, R., Navarez, D., Lee, S. B., and Pheng, S. 2002. Towards utilization of allelopathy-the rice example, pp. 197-207, in M. J. Reigosa, and N. Pedrol (eds.). Allelopathy-from molecules to ecosystemsScience Publishers Inc. Enfield (NH), USA.
29. Pfaffl, M. W. 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nuc. Acids Res 29:2002-2007.
30. Razal, R. A., Ellis, S., Singh, S., Lewist, N. G., and Towers, G. H. N. 1996. Nitrogen recycling in phenylpropanoid metabolism. Phtochemistry 41:31-35.
31. Reichardt, P. B., Chapin, P. S., Bryant, J. P., Matter, B. R., and Clausen, T. P. 1991. Carbon/nutrient balance as a predictor of plant defense in Alaska balsam poplar: potential importance of metabolite turnover. Oecologia 88:401-406.
32. Scheible, W. R., Morcuende, R., Czechowski, T., Fritz, C., Osuna, D., Palacios-Rojas, N., Schindelasch, D., Thimm, O., Udvardi, M. K., and Stitt, M. 2004. Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen. Plant Physiol 136:2483-2499.
33. Shen, L. H., and Lin, W. X. 2007. Effects of phosphorus levels on allelopathic potential of rice co-cultured with barnyardgrass. Allelopathy J 19:393-402.
34. Sheveleva, E., Chmara, W., Bohnert, H. J., and Jensen, R. G. 1997. Increased salt and drought tolerance by D-ononitol production in transgenic Nicotiana tabacum L. Plant Physiol 115:1211-1219.
35. Wu, H. W., Pratley, J., Lemerle, D., and An, M. 1999. Crop cultivars with allelopathy capability. Weed Res 39:171-180.
36. Wysocka-Diller, J. W., Helariutta, Y., Fukaki, H., Malamy, J. E., and Benfey, P. N. 2000. Molecular analysis of SCARECROW function reveals a radial patterning mechanism common to root and shoot. Development 127:595-603.
37. Xiong, J., Lin, W. X., Zhou, J. J., Wu, M. H., Chen, X. X., and He, H. Q. 2005. Studies on biointerference between barnyardgrass and rice accessions at different nitrogen regimes, pp. 501-504, in J. D. I. Harper, M. An, H. Wu, and J. H. Kent (eds.). Proceedings Fourth World Congress on AllelopathyCharles Sturt University, Wagga Wagga, NSW, Australia.
38. Xu, M., Hillwig, M. L., Prisic, S., Coates, R. M., and Peters, R. J. 2004. Functional identification of rice syn-copalyl diphosphate synthase and its role in initiating biosynthesis of diterpenoid phytoalexin/allelopathic natural products. Plant J 39:309-318.
39. Xu, Y., and Hall, T. C. 1993. Cytosolic triosephosphate isomerase is a single gene in rice. Plant Physiol 101:683-687.
40. Yamagata, H., Kunimastu, K., Kamasuka, H., Kuramota, T., and Iwaski, T. 1998. Rice bifunctional a-amylase/subitilisin inhibitor: characterization, localization and changes in developmental and germinating seeds. Biosci. Biotech. Biochem 62:978-985.