메뉴 건너뛰기




Volumn 9, Issue 4, 2004, Pages 465-478

Clinically validated genotype analysis: Guiding principles and statistical concerns

(21)  Brun Vézinet, Françoise a   Costagliola, Dominique b   Ait Khaled, Mounir c   Calvez, Vincent d   Clavel, François a   Clotet, Bonaventura e   Haubrich, Richard f   Kempf, Dale g   King, Marty g   Kuritzkes, Daniel h   Lanier, Randall i   Miller, Michael j   Miller, Veronica k   Phillips, Andrews l   Pillay, Deenan m   Schapiro, Jonathan n   Scott, Janna i   Shafer, Robert o   Zazzi, Maurizio p   Zolopa, Andrew o   more..

b INSERM   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ABACAVIR; AMPRENAVIR; ANTIRETROVIRUS AGENT; LOPINAVIR; RITONAVIR; TENOFOVIR;

EID: 4344701042     PISSN: 13596535     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (57)

References (59)
  • 1
    • 0033920318 scopus 로고    scopus 로고
    • A randomized study of antiretroviral management based on plasma genotypic antiretroviral resistance testing in patients failing therapy
    • CPCRA 046 Study Team for the Terry Beirn Community Programs for Clinical Research on AIDS
    • Baxter JD, Mayers DL, Wentworth DN, Neaton JD, Hoover ML, Winters MA, Mannheimer SB, Thompson MA, Abrams DI, Brizz BJ, Ioannidis JP & Merigan TC. A randomized study of antiretroviral management based on plasma genotypic antiretroviral resistance testing in patients failing therapy. CPCRA 046 Study Team for the Terry Beirn Community Programs for Clinical Research on AIDS. AIDS 2000; 14:F83-93.
    • (2000) AIDS , vol.14
    • Baxter, J.D.1    Mayers, D.L.2    Wentworth, D.N.3    Neaton, J.D.4    Hoover, M.L.5    Winters, M.A.6    Mannheimer, S.B.7    Thompson, M.A.8    Abrams, D.I.9    Brizz, B.J.10    Ioannidis, J.P.11    Merigan, T.C.12
  • 2
    • 0037083803 scopus 로고    scopus 로고
    • Usefulness of monitoring HIV drug resistance and adherence in individuals failing highly active antiretroviral therapy: A randomized study (ARGENTA)
    • Cingolani A, Antinori A, Rizzo MG, Murri R, Ammassari A, Baldini F, Di Giambenedetto S, Cauda R & De Luca A. Usefulness of monitoring HIV drug resistance and adherence in individuals failing highly active antiretroviral therapy: a randomized study (ARGENTA). AIDS 2002; 16:369-379.
    • (2002) AIDS , vol.16 , pp. 369-379
    • Cingolani, A.1    Antinori, A.2    Rizzo, M.G.3    Murri, R.4    Ammassari, A.5    Baldini, F.6    Di Giambenedetto, S.7    Cauda, R.8    De Luca, A.9
  • 14
    • 3142745902 scopus 로고    scopus 로고
    • Resistance genotypes in patients failing nevirapine: Coexistence of majority viral populations expressing Y181C and minority populations expressing K103N
    • Lecossier D, Shulman N, Zolopa AR, Clavel F & Hance AJ. Resistance genotypes in patients failing nevirapine: coexistence of majority viral populations expressing Y181C and minority populations expressing K103N. Antiviral Therapy 2003; 8:S159.
    • (2003) Antiviral Therapy , vol.8
    • Lecossier, D.1    Shulman, N.2    Zolopa, A.R.3    Clavel, F.4    Hance, A.J.5
  • 16
    • 0030945276 scopus 로고    scopus 로고
    • Combination of mutations in human immunodeficiency virus type 1 reverse transcriptase required for resistance to the carbocyclic nucleoside 1592U89
    • Tisdale M, Alnadaf T & Cousens D. Combination of mutations in human immunodeficiency virus type 1 reverse transcriptase required for resistance to the carbocyclic nucleoside 1592U89. Antimicrobial Agents & Chemotherapy 1997; 41:1094-1098.
    • (1997) Antimicrobial Agents & Chemotherapy , vol.41 , pp. 1094-1098
    • Tisdale, M.1    Alnadaf, T.2    Cousens, D.3
  • 17
    • 0035822981 scopus 로고    scopus 로고
    • World-wide variation in HIV-1 phenotypic susceptibility in untreated individuals: Biologically relevant values for resistance testing
    • Harrigan PR, Montaner JS, Wegner SA, Verbiest W, Miller V, Wood R & Larder BA. World-wide variation in HIV-1 phenotypic susceptibility in untreated individuals: biologically relevant values for resistance testing. AIDS 2001; 15:1671-1677.
    • (2001) AIDS , vol.15 , pp. 1671-1677
    • Harrigan, P.R.1    Montaner, J.S.2    Wegner, S.A.3    Verbiest, W.4    Miller, V.5    Wood, R.6    Larder, B.A.7
  • 19
    • 0005114109 scopus 로고    scopus 로고
    • Determination of clinical cut-offs for reduced response to tenofovir DF therapy in antiretroviral-experienced patients
    • Abstract 125
    • Lu B, Hellmann NS, Bates M, Dawson K, Rooney J & Miller MD. Determination of clinical cut-offs for reduced response to tenofovir DF therapy in antiretroviral-experienced patients. Antiviral Therapy 2002; 7:S104-S105. Abstract 125.
    • (2002) Antiviral Therapy , vol.7
    • Lu, B.1    Hellmann, N.S.2    Bates, M.3    Dawson, K.4    Rooney, J.5    Miller, M.D.6
  • 21
    • 0034909925 scopus 로고    scopus 로고
    • Identification of genotypic changes in human immunodeficiency virus protease that correlate with reduced susceptibility to the protease inhibitor lopinavir among viral isolates from protease inhibitor-experienced patients
    • Kempf DJ, Isaacson JD, King MS, Brun SC, Xu Y, Real K, Bernstein BM, Japour AJ, Sun E & Rode RA. Identification of genotypic changes in human immunodeficiency virus protease that correlate with reduced susceptibility to the protease inhibitor lopinavir among viral isolates from protease inhibitor-experienced patients. Journal of Virology 2001; 75:7462-7469.
    • (2001) Journal of Virology , vol.75 , pp. 7462-7469
    • Kempf, D.J.1    Isaacson, J.D.2    King, M.S.3    Brun, S.C.4    Xu, Y.5    Real, K.6    Bernstein, B.M.7    Japour, A.J.8    Sun, E.9    Rode, R.A.10
  • 23
    • 0036768328 scopus 로고    scopus 로고
    • Analysis of the virological response with respect to baseline viral phenotype and genotype in protease inhibitor-experienced HIV-1-infected patients receiving lopinavir/ritonavir therapy
    • Kempf DJ, Isaacson JD, King MS, Brun SC, Sylte J, Richards B, Bernstein B, Rode R & Sun E. Analysis of the virological response with respect to baseline viral phenotype and genotype in protease inhibitor-experienced HIV-1-infected patients receiving lopinavir/ritonavir therapy. Antiviral Therapy 2002; 7:165-174.
    • (2002) Antiviral Therapy , vol.7 , pp. 165-174
    • Kempf, D.J.1    Isaacson, J.D.2    King, M.S.3    Brun, S.C.4    Sylte, J.5    Richards, B.6    Bernstein, B.7    Rode, R.8    Sun, E.9
  • 26
    • 0038655202 scopus 로고    scopus 로고
    • Multivariate analyses of antiviral response to tenofovir DF therapy in antiretroviral-experienced patients
    • Abstract 14
    • Miller MD, Zhong L, Chen S, Margot NA & Wulfsohn W. Multivariate analyses of antiviral response to tenofovir DF therapy in antiretroviral- experienced patients. Antiviral Therapy 2002; 7:S16. Abstract 14.
    • (2002) Antiviral Therapy , vol.7
    • Miller, M.D.1    Zhong, L.2    Chen, S.3    Margot, N.A.4    Wulfsohn, W.5
  • 30
    • 0035876456 scopus 로고    scopus 로고
    • Phenotypic hypersusceptibility to non-nucleoside reverse transcriptase inhibitors in treatment-experienced HIV-infected patients: Impact on virological response to efavirenz-based therapy
    • Shulman N, Zolopa AR, Passaro D, Shafer RW, Huang W, Katzenstein D, Israelski DM, Hellmann N, Petropoulos C & Whitcomb J. Phenotypic hypersusceptibility to non-nucleoside reverse transcriptase inhibitors in treatment-experienced HIV-infected patients: impact on virological response to efavirenz-based therapy. AIDS 2001; 15:1125-1132.
    • (2001) AIDS , vol.15 , pp. 1125-1132
    • Shulman, N.1    Zolopa, A.R.2    Passaro, D.3    Shafer, R.W.4    Huang, W.5    Katzenstein, D.6    Israelski, D.M.7    Hellmann, N.8    Petropoulos, C.9    Whitcomb, J.10
  • 32
    • 0038180335 scopus 로고    scopus 로고
    • Interruption of nonnucleoside reverse transcriptase inhibitor (NNRTI) therapy for 2 months has no effect on levels of human immunodeficiency virus type 1 in plasma of patients harboring viruses with mutations asociated with resistance to NNRTIs
    • Wirden M, Simon A, Schneider L, Tubiana R, Paris L, Marcelin AG, Delaugerre C, Legrand M, Herson S, Peytavin G, Katlama C & Calvez V. Interruption of nonnucleoside reverse transcriptase inhibitor (NNRTI) therapy for 2 months has no effect on levels of human immunodeficiency virus type 1 in plasma of patients harboring viruses with mutations asociated with resistance to NNRTIs. Journal of Clinical Microbiology 2003; 41:2713-2715.
    • (2003) Journal of Clinical Microbiology , vol.41 , pp. 2713-2715
    • Wirden, M.1    Simon, A.2    Schneider, L.3    Tubiana, R.4    Paris, L.5    Marcelin, A.G.6    Delaugerre, C.7    Legrand, M.8    Herson, S.9    Peytavin, G.10    Katlama, C.11    Calvez, V.12
  • 34
    • 0346154452 scopus 로고    scopus 로고
    • Antiviral activity of lamivudine in persons infected with HIV-1 that has M184V and multiple thymidine analogue mutations
    • Abstract 140
    • Campbell TB, Young RK, Johnson SC, Lanier ER & Kuritzkes DR. Antiviral activity of lamivudine in persons infected with HIV-1 that has M184V and multiple thymidine analogue mutations. Antiviral Therapy 2003; 8:S156. Abstract 140.
    • (2003) Antiviral Therapy , vol.8
    • Campbell, T.B.1    Young, R.K.2    Johnson, S.C.3    Lanier, E.R.4    Kuritzkes, D.R.5
  • 36
    • 11144325691 scopus 로고
    • Partial least squares regression: A tutorial
    • Geladi P & Kowalski B. Partial least squares regression: a tutorial. Analytica Chimica Acta 1986; 185:1-17.
    • (1986) Analytica Chimica Acta , vol.185 , pp. 1-17
    • Geladi, P.1    Kowalski, B.2
  • 37
    • 0141544505 scopus 로고    scopus 로고
    • A collaborative HIV resistance response database initiative: Predicting virological response using neural network models
    • Abstract 119
    • Wang D, DeGruttola V, Hammer S, Harrigan R, Larder B, Wegner S, Winslow D & Zazzi M. A collaborative HIV resistance response database initiative: predicting virological response using neural network models. Antiviral Therapy 2002; 7:S96-S97. Abstract 119.
    • (2002) Antiviral Therapy , vol.7
    • Wang, D.1    DeGruttola, V.2    Hammer, S.3    Harrigan, R.4    Larder, B.5    Wegner, S.6    Winslow, D.7    Zazzi, M.8
  • 38
    • 4344707784 scopus 로고    scopus 로고
    • A neural network model using clinical cohort data accurately predicts virological response and identifies regimens with increased probability of success in treatment failures
    • Abstract 102
    • Wang D, Larder BA, Revell A, Harrigan R & Montaner J. A neural network model using clinical cohort data accurately predicts virological response and identifies regimens with increased probability of success in treatment failures. Antiviral Therapy 2003; 8:S112. Abstract 102.
    • (2003) Antiviral Therapy , vol.8
    • Wang, D.1    Larder, B.A.2    Revell, A.3    Harrigan, R.4    Montaner, J.5
  • 40
    • 0005113372 scopus 로고    scopus 로고
    • A dynamic rules-based interpretation system derived by an expert panel is predictive of virological failure
    • Abstract 112
    • Reid C, Bassett R, Day S, Larder B, DeGruttola V & Winslow D. A dynamic rules-based interpretation system derived by an expert panel is predictive of virological failure. Antiviral Therapy 2002; 7:S91-S92. Abstract 112.
    • (2002) Antiviral Therapy , vol.7
    • Reid, C.1    Bassett, R.2    Day, S.3    Larder, B.4    DeGruttola, V.5    Winslow, D.6
  • 42
    • 0142130055 scopus 로고    scopus 로고
    • HIV-1 reverse transcriptase mutations other than M184I/V that suppress zidovudine resistance also increase in vitro susceptibility to tenofovir, but not stavudine
    • Abstract 29
    • Parkin NT, Chappey C, Petropoulos CJ & Hellmann N. HIV-1 reverse transcriptase mutations other than M184I/V that suppress zidovudine resistance also increase in vitro susceptibility to tenofovir, but not stavudine. Antiviral Therapy 2003; 8:S34. Abstract 29.
    • (2003) Antiviral Therapy , vol.8
    • Parkin, N.T.1    Chappey, C.2    Petropoulos, C.J.3    Hellmann, N.4
  • 43
    • 0021857146 scopus 로고
    • Regression models for prognostic prediction: Advantages, problems, and suggested solutions
    • Harrell FE, Lee KL, Matchar DB & Reichert TA. Regression models for prognostic prediction: advantages, problems, and suggested solutions. Cancer Treatment Reports 1985; 69:1071-1077.
    • (1985) Cancer Treatment Reports , vol.69 , pp. 1071-1077
    • Harrell, F.E.1    Lee, K.L.2    Matchar, D.B.3    Reichert, T.A.4
  • 47
    • 0036148608 scopus 로고    scopus 로고
    • Amprenavir inhibitory qoutient and virological response in human immunodeficiency virus-infected patients on amprenavir-containing salvage regimen without or with ritonavir
    • Duval X, Lamotte C, Race E, Descamps D, Damond F, Clavel F, Leport C, Peytavin G & Vilde JL. Amprenavir inhibitory qoutient and virological response in human immunodeficiency virus-infected patients on amprenavir-containing salvage regimen without or with ritonavir. Antimicrobial Agents & Chemotherapy 2002; 46:570-574.
    • (2002) Antimicrobial Agents & Chemotherapy , vol.46 , pp. 570-574
    • Duval, X.1    Lamotte, C.2    Race, E.3    Descamps, D.4    Damond, F.5    Clavel, F.6    Leport, C.7    Peytavin, G.8    Vilde, J.L.9
  • 51
    • 69349106654 scopus 로고    scopus 로고
    • Efficacy of ritonavir/amprenavir containing regimen in HIV-1 protease inhibitor experienced patients and predictivity of the delta viral load values up to week 24 using genotypic inhibitory quotient
    • Marcelin AG, Lamotte C, Ait Mohand H, Delaugerre C, Ktorza N, Bossi P, Bricaire F, Costagliola D, Katlama C, Peytavin G & Calvez V. Efficacy of ritonavir/amprenavir containing regimen in HIV-1 protease inhibitor experienced patients and predictivity of the delta viral load values up to week 24 using genotypic inhibitory quotient. Antiviral Therapy 2003; 8(Suppl. 1):S225.
    • (2003) Antiviral Therapy , vol.8 , Issue.SUPPL. 1
    • Marcelin, A.G.1    Lamotte, C.2    Ait Mohand, H.3    Delaugerre, C.4    Ktorza, N.5    Bossi, P.6    Bricaire, F.7    Costagliola, D.8    Katlama, C.9    Peytavin, G.10    Calvez, V.11
  • 53
    • 1842465652 scopus 로고    scopus 로고
    • Trends in genotypic and phenotypic resistance among clinical samples submitted for routine HIV resistance analysis
    • Abstract 118
    • Bacheler L, Vermeiren H, McKenna P, Van Houtte M & Lecocq P. Trends in genotypic and phenotypic resistance among clinical samples submitted for routine HIV resistance analysis. Antiviral Therapy 2003; 8:S132. Abstract 118.
    • (2003) Antiviral Therapy , vol.8
    • Bacheler, L.1    Vermeiren, H.2    McKenna, P.3    Van Houtte, M.4    Lecocq, P.5
  • 56
    • 4344666641 scopus 로고    scopus 로고
    • Which nucleoside and nucleotide backbone combinations select for the K65R mutation in HIV-1 reverse transcriptase?
    • Abstract 137
    • Winston A, Pozniak A, Gazzard B & Nelson M. Which nucleoside and nucleotide backbone combinations select for the K65R mutation in HIV-1 reverse transcriptase? Antiviral Therapy 2003; 8:S153. Abstract 137.
    • (2003) Antiviral Therapy , vol.8
    • Winston, A.1    Pozniak, A.2    Gazzard, B.3    Nelson, M.4
  • 58
    • 0030892246 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 reverse transcriptase genotype and drug susceptibility changes in infected individuals receiving dideoxyinosine monotherapy for 1 to 2 years
    • Winters MA, Schafer RW, Jellinger RA, Mamtora G, Gingeras T & Merigan TC. Human immunodeficiency virus type 1 reverse transcriptase genotype and drug susceptibility changes in infected individuals receiving dideoxyinosine monotherapy for 1 to 2 years. Antimicrobial Agents & Chemotherapy 1997; 41:757-762.
    • (1997) Antimicrobial Agents & Chemotherapy , vol.41 , pp. 757-762
    • Winters, M.A.1    Schafer, R.W.2    Jellinger, R.A.3    Mamtora, G.4    Gingeras, T.5    Merigan, T.C.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.