Human paralogs of KIAA0187 were created through independent pericentromeric-directed and chromosome-specific duplication mechanisms

Genome Research

Volumn 12, Issue 1, 2002, Pages 67-80

  Crosier, Moira ^a   Viggiano, Luigi ^b   Guy, Jane ^a   Misceo, Doriana ^b   Stones, Robert ^a   Wei, Wenbin ^a   Hearn, Tom ^a,c   Ventura, Mario ^a   Archidiacono, Nicoletta ^a   Rocchi, Mariano ^a   Jackson, Michael S ^a  

^a NEWCASTLE UNIVERSITY   (United Kingdom)

^b UNIVERSITY OF BARI   (Italy)

^c UNIVERSITY OF SOUTHAMPTON   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

CATHEPSIN L;

ARTICLE; CENTROMERE; CHROMOSOME 10Q; CHROMOSOME DUPLICATION; CHROMOSOME INVERSION; CHROMOSOME MAP; CHROMOSOME REARRANGEMENT; CHROMOSOME SATELLITE ASSOCIATION; COMPUTER MODEL; CONTROLLED STUDY; EXON; FLUORESCENCE IN SITU HYBRIDIZATION; GENE SEQUENCE; GENETIC TRANSCRIPTION; HUMAN; NORTHERN BLOTTING; NUCLEOTIDE REPEAT; NUCLEOTIDE SEQUENCE; PARALOGY; PHYLOGENETIC TREE; PHYLOGENY; PRIORITY JOURNAL; PROTEIN FAMILY; PSEUDOGENE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA SPLICING;

ANIMALS; CENTROMERE; CHROMOSOMES, HUMAN, PAIR 10; EVOLUTION, MOLECULAR; EXPRESSED SEQUENCE TAGS; GENE DUPLICATION; HUMANS; INVERSION, CHROMOSOME; LINKAGE (GENETICS); MACACA MULATTA; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PAN TROGLODYTES; PHYSICAL CHROMOSOME MAPPING; PONGO PYGMAEUS; PSEUDOGENES; X CHROMOSOME;

EID: 18244396646     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.213702     Document Type: Article

References (60)

1. Basic local alignment search tool
2. A panel of subchromosomal painting libraries representing over 300 regions of the human genome
3. Segmental duplications: Organization and impact within the current human genome project assembly
4. Sandwiching of a gene within 12 kb of a functional telomere and alpha satellite does not result in silencing
5. Neurofibromatosis pseudogene amplification underlies euchromatic cytogenetic duplications and triplications of proximal 15q
6. Amplification of a pseudogene cassette underlies euchromatic variation of 16p at the cytogenetic level
7. Tandem repeats finder: A program to analyze DNA sequences
8. The physical maps for sequencing human chromosomes 1, 6, 9, 10, 13, 20 and X
9. A novel family of cathepsin L-like (CTSLL) sequences on human chromosome 10q and related transcripts
10. Large genomic duplicons map to sites of instability in the Prader-Willi/Angelman syndrome chromosome region 15q11-q13
11. Drosophila heterochromatin: Retreats for repeats
12. Human chromosome 19 and related regions in mouse: Conservative and lineage-specific evolution
13. Three human glutamate dehydrogenase genes (GLUD1, GLUDP2, and GLUDP3) are located on chromosome 10q, but are not closely physically linked
14. A physical map of 30,000 human genes
15. Report of the third international workshop on human chromosome 10 mapping and sequencing
16. Comparative mapping of the region of human chromosome 7 deleted in Williams syndrome
17. The DNA sequence of human chromosome 22
18. A common molecular basis for rearrangement disorders on chromosome 22q11
19. Duplication of a gene-rich cluster between 16p11.1 and Xq28: A novel pericentromeric-directed mechanism for paralogous genome evolution
20. Interchromosomal duplications of the adrenoleukodystrophy locus: A phenomenon of pericentromeric plasticity
21. CAGGG repeats and the pericentromeric duplication of the hominoid genome
22. Cathepsin L (CTSL) is located in the chromosome 9q21-22 region: A related sequence is on chromosome 10
23. The relationship between chromosome structure and function at a human telomeric region
24. Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: A search for candidate genes at or near the human chromosome 22 pericentromere
25. The genomic record of humankind's evolutionary roots
26. Genomic sequence and transcriptional profile of the boundary between pericentromeric satellites and genes on human chromosome arm 10q
27. Dating the human-ape split by a molecular clock of mitochondrial DNA
28. "Organisation, expression and evolution of Kruppel-type zinc finger genes in human chromosomal region 10p11.2-q11.2"
29. Molecular structure and evolution of an α-satellite non-α-satellite junction at 16p11
30. Identification of a testis-expressed creatine transporter gene at 16p11.2 and confirmation of the X-linked locus to Xq28
31. A 9.75-Mb map across the centromere of human chromosome 10
32. Sequences flanking the centromere of human chromosome 10 are a complex patchwork of arm-specific sequences, stable duplications, and unstable sequences with homologies to telomeric and other centromeric locations
33. Structure of chromosomal duplicons and their role in mediating human genomic disorders
34. Structure of the highly conserved HERC2 gene and of multiple partially duplicated paralogs in human
35. Assignment of the GDH loci to human chromosomes 10q23 and Xq24 by in situ hybridization
36. Initial sequencing and analysis of the human genome
37. High resolution mapping of human chromosome 11 by in situ hybridization with cosmid clones
38. Genome duplications and other features in 12 Mb of DNA sequence from human chromosome 16p and 16q
39. Mechanism of spreading of the highly related neurofibromatosis type 1 (NF1) pseudogenes on chromosomes 2, 14 and 22
40. The evolutionary fate and consequences of duplicate genes
41. Estimation of synteny conservation and genome compaction between pufferfish (Fugu) and human
42. Phylogenetic relations of humans and African apes from DNA sequences in the psi eta-globin region
43. Prediction of the coding sequences of unidentified human genes, V: The coding sequences of 40 new genes (KIAA0161-KIAA0200) deduced by analysis of cDNA clones from human cell line KG-1
44. Conservation of pericentromeric duplications of a 200-kb part of the human 21q22.1 region in primates
45. Genome evolution and the evolution of exon-shuffling: A review
46. Additional complexity on human chromosome 15q: Identification of a set of newly recognized duplicons (LCR15) on 15q11-q13, 15q24, and 15q26
47. Emergence and scattering of multiple neurofibromatosis (NF1)-related sequences during hominoid evolution suggests a process of pericentromeric interchromosomal transposition
48. A large polymorphic repeat in the pericentromeric region of human chromosome 15q contains three partial gene duplications
49. A genetic linkage map of the baboon (Papio hamadryas) genome based on human microsatellite polymorphisms
50. Juxta-centromeric region of human chromosome 21 is enriched for pseudogenes and gene fragments
51. Nucleotide sequences of immunoglobulin epsilon genes of chimpanzee and orangutan: DNA molecular clock and hominoid evolution
52. Evolutionarily conserved low copy repeats (LCRs) in 22q11 mediate deletions, duplications, translocations, and genomic instability: An update and literature review
53. Prevalence of small inversions in yeast gene order evolution
54. Blast 2 sequences: A new tool for comparing protein and nucleotide sequences
55. Large multi-chromosomal duplications encompass many members of the olfactory receptor gene family in the human genome
56. Evolution of centromeric alpha satellite DNA: Molecular organisation within and between human and primate chromosomes
57. Fluorescence in situ hybridization analysis of keratinocyte growth factor gene amplification and dispersion in evolution of great apes and humans