Low frequency ultrasound induces aggregation of porcine fumarase by free radicals production

Biophysical Chemistry

Volumn 111, Issue 1, 2004, Pages 35-42

  Barteri, M ^a   Diociaiuti, M ^b   Pala, A ^a   Rotella, S ^a  

^a SAPIENZA UNIVERSITY OF ROME   (Italy)

^b REGINA ELENA NATIONAL CANCER INSTITUTE   (Italy)

Author keywords

(N (1 pyrenyl) maleimide); Amyloid like aggregation; CD; circular dichroism; Free radicals; Fumarase; Hydrogen peroxide; ME 2; mercaptoethanol; PDB; PM; Protein Data Bank; TEM; Transmission Electron Microscopy; ultrasound; US

Indexed keywords

AMYLOID; CYSTEINE; DISULFIDE; FUMARATE HYDRATASE; HYDROXYL RADICAL;

ARTICLE; CIRCULAR DICHROISM; FLUORESCENCE SPECTROSCOPY; IRRADIATION; OXIDATION; PRIORITY JOURNAL; PROTEIN AGGREGATION; PROTEIN CONFORMATION; PROTEIN STRUCTURE; STEADY STATE; SWINE; TRANSMISSION ELECTRON MICROSCOPY; ULTRASOUND;

SUIDAE;

EID: 4344636825     PISSN: 03014622     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bpc.2004.04.002     Document Type: Article

References (47)

1. Aruoma O., Halliwell B. Molecular Biology of Free Radicals in Human Disease. 1998;Saint Lucia OICA International, USA
2. Baynes J.W. Role of oxidative stress in development of complications in diabetes. Diabetes. 40:1991;405-412
3. Flohè L., Beckman R. Oxygen centered free radicals as mediators of inflammation. Sies H., Giertz H., Loschen G., Sies H. Oxidative stress. 1985;403-435 New York Academic Press
4. Halliwell B., Gutteridge J.M.C. Halliwell B., Gutteridge J.M.C. Free radicals in Biology and Medicine. 2nd ed.:1989;416-508 Claredon Press, Oxford
5. Halliwell B., Gutteridge J.M.C. Halliwell B., Gutteridge J.M.C. Free radicals in biology and medicine. 1989;22-85 Claredon Press, Oxford
6. Oberly L.W. Free radicals and diabetes. Free Radic. Biol. Med. 5:1988;113-124
7. Fujimori E. Cross-linking and fluorescence changes of collagen by glycation and oxidation. Biochim. Biophys. Acta. 99:1989;105-110
8. Kantrow S.P., Tatro L.G., Piantadosi C.A. Oxidative stress and adenine nucleotide control of mitochondrial permeability transition. Free Radic. Biol. Med. 28:2000;251-260
9. Liang L.P., Ho Y.S., Patel M. Mitochondrial superoxide production in kainate-induced hippocampal damage. Neuroscience. 101:2000;563-570
10. Bowry V.W., Ingold K.U. The unexpected role of vitamin E (α-tocopherol) in the peroxidation of human low-density lipoproteins. Acc. Chem. Res. 32:1999;27-34
11. Rice-Evans C., Diplock A. Current status of antioxidant therapy. Free Radic. Biol. Med. 15:2000;77-96
12. Hunt J.V., Smith C.C.T., Wolff S.P. Autoxidative glycosylation and possible involvement of peroxides and free radical in LDL modification by glucose. Diabetes. 39:1990;1420-1424
13. Keyer K., Imlay J.A. Superoxide accelerates DNA damage by elevating free-iron levels. Proc. Natl. Acad. Sci. U. S. A. 93:1996;13635-13640
14. Imlay J.A. Toxic DNA damage by hydrogen peroxide through the Fenton reaction in vivo and in vitro. Linn S. Sci. 240:1988;640-642
15. Giulivi C., Boveris A., Cadenas E. Hydroxyl radical generation during mitochondrial electron-transfer and formation of 8-hydroxydesoxy-guanosine in mitochondrial DNA. Arch. Biochem. Biophys. 316:1995;909-916
16. Halliwell B., Grootveld M., Gutteridge J.M.C. Methods for the measurement of hydroxyl radical in biochemical systems: deoxyribose degradation and aromatic hydroxylation. Glick D. Methods of Biochemical Analysis. vol. 33:1987;59-90 Wiley, New York
17. Halliwell B., Clement M.V., Long L.H. Hydrogen peroxide in the human body. FEBS Lett. 486:2000;10-13
18. Whelan D.T., Hill R.E., McClorry S. Fumaric aciduria: a new organic aciduria, associated with mental retardation and speech impairment. Clin. Chim. Acta. 132:1983;301-308
19. Gellera C., Uziel G., Rimoldi M., Zeviani M., Laverda A., Carrara F., Di Donato S. Fumarase deficiency is an autosomal recessive encephalopathy affecting both the mitochondrial and cytosolic enzymes. Neurology. 40:1990;495-499
20. Zinn A.B., Kerr D.S., Hoppel C.L. Fumarase deficiency: a new cause of mitochondrial encephalomyopathy. N. Engl. J. Med. 315:1986;469-475
21. Hill R.L., Teipel J.W. Boyer P.D. The Enzymes. 1971;539-571 Academic Press, New York
22. Rustin P., Bourgeron T., Parfait B., Chretien D., Munnich A., Rütig A. Inborn errors of the Krebs cycle: a group of unusual mitochondrial disease in human. Biochim. Biophys. Acta. 1361:1997;185-197
23. Beekmans S., Kanarek L. Subunit interactions in pig heart fumarase: I. Study of tetramer-dimer equilibrium in dilute urea solutions. Int. J. Biochem. 14(11):1982;965-970
24. Beekmans S., Kanarek L. Subunit interactions in pig heart fumarase: II. Study of tetramer-dimer equilibrium in function of enzyme concentration and temperature. Int. J. Biochem. 14(11):1982;971-975
25. Beekmans S., Kanarek L. Chicken heart fumarase: its purification and physical-chemical characterization. A comparison with the enzyme from pig heart. Int. J. Biochem. 14(6):1982;453-460
26. Massey V. The crystallization of fumarase. Biochem. J. 51:1952;484-490
27. Sacchettini J.C., Frazier M.W., Chiara D.C., Banazak L.J., Grant G.A. Purification, crystallization and preliminary X-ray data for porcine fumarase. J. Biol. Chem. 261(32):1986;15183-15185
28. Beekmans S., Kanarek L. A new purification procedure for fumarase based of affinity chromatography. Isolation and characterization of pig-liver fumarase. Eur. J. Biochem. 78:1977;437-444
29. Dosztànyi Zs., Fiser A., Simon I. Stabilization centers in proteins: identification characterization and prediction. J. Mol. Biol. 272:1997;597-612
30. Garnier J., Gibrat J.F., Robson B. Methods Enzymol. 266:1996;540-553
31. Bairoch A., Bucher P., Hofmann K. The Proposite database, its status. Nucleic Acids Res. 25:1997;217-221
32. Johnson W.C. Protein secondary structure and circular dichroism: a practical guide. Proteins. 7:1990;205-214
33. Beeckmans S., Kanarek L. Structure and activity of swine heart fumarase in dilute urea solutions. Arch. Int. Physiol. Biochim. 81(5):1973;956
34. Boveris A., Cadenas E. Production of superoxide radicals and hydrogen peroxide in mitochondria. Oberley L.W. Superoxide Dismutase. 1982;15-30 CRC Press, Boca Raton
35. Suslick K.S. Suslick K.S. Ultrasound. Its Chemical, Physical and Biological Effects. 1988;140-152 VCH, USA
36. Makino K., Riesz P. E.S.R. of spin-trapped radicals in gamma-irradiated polycrystalline amino acids. Chromatographic separation of radicals. J. Am. Chem. Soc. 104:1982;3537-3539
37. Makino K., Mossoba M.M., Riesz P. Formation of OH· and H· Radiat. Res. 96:1983;416-421
38. Jana A.K., Agarwal S., Chatterjee S.N. Membrane lipid peroxidation by ultrasound: mechanism and implications. Radiat. Environ. Biophys. 25:1986;309-314
39. Jana A.K., Agarwal S., Chatterjee S.N. The induction of lipid peroxidation in liposomal membrane by ultrasound and the role of hydroxyl radicals. Radiat. Res. 124:1990;7-14
40. Price G.J., Lenz E.J. The use of dosimeters to measure radical production in aqueous sonochemical systems. Ultrasonics. 31(6):1993;451-456
41. Chaichi M.J., Karami A.R., Shockravi A., Shamsipur M. Chemiluminescence characteristics of cumarin derivatives as blue fluorescers in peroxyoxalate-hydrogen peroxide system. Spectrochim. Acta, Part A: Mol. Biomol. Spectrosc. 59A(6):2003;1145-1150
42. Woodward J., Tate J., Herrnann P.C., Evans B.R.J. Comparison of Ellman's reagent with N-(1-pyrenyl)maleimide for the determination of free sulfhydryl groups in reduced cellobiohydrolase I from richoderma reesei. Biochem. Biophys. Methods. 26:1993;121-129
43. Wu C.W., Yarbrough L.R., Wu Y.-H.F. N-(1-pyrenyl)maleimide: a fluorescent cross-linking reagent. Biochemistry. 15(13):1976;2863-2868
44. Egerton R.F. Egerton R.F. Electron energy loss spectroscopy. 1986;85-89 Plenum, New York
45. Valentine R.C., Shapiro B.M., Stadtman E.R. Regulation of glutamine synthetase: XII. Electron microscopy of enzyme from Escherichia coli. Biochemistry. 7:1968;2143-2152
46. Arvinte T., Cudd A., Drake A.F. The structure and mechanism of formation of human calcitonin fibrils. J. Biol. Chem. 268(9):1993;6415-6422
47. Arvinte T., Drake A.F. Comparative study of human and salmon calcitonin secondary structure in solutions with low dielectric constants. J. Biol. Chem. 268(9):1993;6408-6414