-
1
-
-
0024310253
-
Multiple mutations in HIV-1 reverse transcriptase confer high-level resistance to Zidovudine (AZT)
-
Larder, B. A., and Kemp, S. D. (1989). Multiple mutations in HIV-1 reverse transcriptase confer high-level resistance to Zidovudine (AZT). Science, 246, 1155-1158.
-
(1989)
Science
, vol.246
, pp. 1155-1158
-
-
Larder, B.A.1
Kemp, S.D.2
-
2
-
-
0025950055
-
Resistance to ddI and sensitivity to AZT induced by a mutation in HIV-1 reverse transcriptase
-
St. Clair, M. H., Martin, J. L., Tudor-Williams, G., Bach, M. C., Vavro, C. L., King, D. M., Kellam, P., Kemp, S. D., and Larder, B. A. (1991). Resistance to ddI and sensitivity to AZT induced by a mutation in HIV-1 reverse transcriptase. Science, 253, 1557-1559.
-
(1991)
Science
, vol.253
, pp. 1557-1559
-
-
St. Clair, M.H.1
Martin, J.L.2
Tudor-Williams, G.3
Bach, M.C.4
Vavro, C.L.5
King, D.M.6
Kellam, P.7
Kemp, S.D.8
Larder, B.A.9
-
3
-
-
0027957791
-
Nevirapine resistance mutations of human immunodeficiency virus type 1 selected during therapy
-
Richman, D. D. (1994). Nevirapine resistance mutations of human immunodeficiency virus type 1 selected during therapy. J. Virol., 68, 1660-1666.
-
(1994)
J. Virol.
, vol.68
, pp. 1660-1666
-
-
Richman, D.D.1
-
4
-
-
0028031833
-
Resistance to 2′,3′-dideoxycytidine conferred by a mutation in codon 65 of the human immunodeficiency virus type 1 reverse transcriptase
-
Zhang, D., Caliendo, A. M., Eron, J. J, DeVore, K. M., Kaplan, J. C., Hirsch, M. S., and D'auuila, R. T. (1994). Resistance to 2′,3′-dideoxycytidine conferred by a mutation in codon 65 of the human immunodeficiency virus type 1 reverse transcriptase. Antimicrob. Agents Chemother., 38, 282-287.
-
(1994)
Antimicrob. Agents Chemother.
, vol.38
, pp. 282-287
-
-
Zhang, D.1
Caliendo, A.M.2
Eron, J.J.3
DeVore, K.M.4
Kaplan, J.C.5
Hirsch, M.S.6
D'auuila, R.T.7
-
5
-
-
0028024028
-
Subunit specificity of mutations that confer resistance to nonucleoside inhibitors in human immunodeficiency virus type 1 reverse transcriptase
-
Boyer, P. L., Ding, J., Arnold, E., and Hughes, S. H. (1994). Subunit specificity of mutations that confer resistance to nonucleoside inhibitors in human immunodeficiency virus type 1 reverse transcriptase. Antimicrob. Agents Chemother., 38, 1909-1914.
-
(1994)
Antimicrob. Agents Chemother.
, vol.38
, pp. 1909-1914
-
-
Boyer, P.L.1
Ding, J.2
Arnold, E.3
Hughes, S.H.4
-
6
-
-
0028341306
-
Sensitivity of wild-type human immunodeficiency virus type 1 reverse transcriptase to dideoxynucleotides depends on template length; the sensitivity of drug-resistant mutants does not
-
Boyer, P. L., Tantillo, C., Jacobo-Molina, A., Nanni, R. G., Ding, J., Arnold, E., and Hughes, S. H. (1994). Sensitivity of wild-type human immunodeficiency virus type 1 reverse transcriptase to dideoxynucleotides depends on template length; the sensitivity of drug-resistant mutants does not. Proc. Natl. Acad. Sci., USA, 91, 4882-4886.
-
(1994)
Proc. Natl. Acad. Sci., USA
, vol.91
, pp. 4882-4886
-
-
Boyer, P.L.1
Tantillo, C.2
Jacobo-Molina, A.3
Nanni, R.G.4
Ding, J.5
Arnold, E.6
Hughes, S.H.7
-
7
-
-
69349107223
-
Virological analysis of HIV-1 isolates in patients treated with the non-nucleoside reverse transcriptase inhibitor R091767 (8-Cl TIBO)
-
Abstracts of the Fourth International Workshop on HVI-1 Drug Resistance, Sardinia, Italy
-
Moermans, M., De Raeymaeker, M., Boeckx, I., Van den Broeck, R., Stoffels, P., De Brabander, M., De Cree, J., Hertogs, K., Pauwels, R., Staszewski, S., and Andries, K. (1995). Virological analysis of HIV-1 isolates in patients treated with the non-nucleoside reverse transcriptase inhibitor R091767 (8-Cl TIBO). Abstracts of the Fourth International Workshop on HVI-1 Drug Resistance, Sardinia, Italy.
-
(1995)
-
-
Moermans, M.1
De Raeymaeker, M.2
Boeckx, I.3
Van den Broeck, R.4
Stoffels, P.5
De Brabander, M.6
De Cree, J.7
Hertogs, K.8
Pauwels, R.9
Staszewski, S.10
Andries, K.11
-
9
-
-
4344603642
-
-
MCPRO, Version 1.6 New Haven, CT: Yale University
-
Jorgensen, W. L. (1998). MCPRO, Version 1.6. New Haven, CT: Yale University.
-
(1998)
-
-
Jorgensen, W.L.1
-
10
-
-
0028155689
-
A new method for predicting binding affinity in computer-aided drug design
-
Aqvist, J., Medina, C., and Samuelsson, J.-E. (1994). A new method for predicting binding affinity in computer-aided drug design. Prot. Eng., 7, 385-391.
-
(1994)
Prot. Eng.
, vol.7
, pp. 385-391
-
-
Aqvist, J.1
Medina, C.2
Samuelsson, J.-E.3
-
11
-
-
0001389474
-
An extended linear response method for determining free energies of hydration
-
Carlson, H. A., and Jorgensen, W. L. (1995). An extended linear response method for determining free energies of hydration. J. Phys. Chem., 99, 10667-10673.
-
(1995)
J. Phys. Chem.
, vol.99
, pp. 10667-10673
-
-
Carlson, H.A.1
Jorgensen, W.L.2
-
12
-
-
0001127721
-
Free energies of solvation in choroform and water from a linear response approach
-
McDonald, N. A., Carlson, H. A., and Jorgensen, W. L. (1997). Free energies of solvation in choroform and water from a linear response approach. J. Phys. Org. Chem., 10, 563-576.
-
(1997)
J. Phys. Org. Chem.
, vol.10
, pp. 563-576
-
-
McDonald, N.A.1
Carlson, H.A.2
Jorgensen, W.L.3
-
13
-
-
0030906731
-
Binding affinities for sulfoamide inhibitors with human thrombin using Monte Carlo simulations with a linear response method
-
Hertzog-Jones, D. K., and Jorgensen W. L. (1997). Binding affinities for sulfoamide inhibitors with human thrombin using Monte Carlo simulations with a linear response method. J. Med. Chem., 40, 1539-1549.
-
(1997)
J. Med. Chem.
, vol.40
, pp. 1539-1549
-
-
Hertzog-Jones, D.K.1
Jorgensen, W.L.2
-
14
-
-
0032497589
-
Investigations of neurotropic inhibitors of FK506 binding protein via Monte Carlo simulations
-
Lamb, M. L., and Jorgensen. W. L. (1999). Investigations of neurotropic inhibitors of FK506 binding protein via Monte Carlo simulations. J. Med. Chem., 41, 3928-3939.
-
(1999)
J. Med. Chem.
, vol.41
, pp. 3928-3939
-
-
Lamb, M.L.1
Jorgensen, W.L.2
-
15
-
-
0033135425
-
Estimation of the binding affinities of FKBP12 inhibitors using a linear response method
-
Lamb, M. L., Tirado-Rives, J., and Jorgensen, W. L. (1999). Estimation of the binding affinities of FKBP12 inhibitors using a linear response method. Bioorg. Med. Chem., 7, 851-860.
-
(1999)
Bioorg. Med. Chem.
, vol.7
, pp. 851-860
-
-
Lamb, M.L.1
Tirado-Rives, J.2
Jorgensen, W.L.3
-
16
-
-
0030815020
-
Computational binding affinities for trypsin benzamidine complexes via free energy perturbations
-
Pierce, A. C., and Jorgensen, W. L. (1997). Computational binding affinities for trypsin benzamidine complexes via free energy perturbations. J. Phys. Chem. B, 36, 1466-1469.
-
(1997)
J. Phys. Chem. B
, vol.36
, pp. 1466-1469
-
-
Pierce, A.C.1
Jorgensen, W.L.2
-
17
-
-
20644437755
-
Prediction of binding affinities for TIBO inhibitors of HIV-1 reverse transcriptase using Monte Carlo simulations in a linear response method
-
Smith, R. H., Jr., Jorgensen, W. L., Tirado-Rives, J., Lamb, M. L., Janssen, P. A. J., Michejda, C. J., and Kroeger Smith, M. B. (1998). Prediction of binding affinities for TIBO inhibitors of HIV-1 reverse transcriptase using Monte Carlo simulations in a linear response method. J. Med. Chem., 41, 5272-5286.
-
(1998)
J. Med. Chem.
, vol.41
, pp. 5272-5286
-
-
Smith Jr., R.H.1
Jorgensen, W.L.2
Tirado-Rives, J.3
Lamb, M.L.4
Janssen, P.A.J.5
Michejda, C.J.6
Kroeger Smith, M.B.7
-
18
-
-
0035905853
-
Estimation of binding affinities for HEPT and nevirapine analogs with HIV-1 reverse transcriptase via Monte Carlo simulations
-
Rizzo, R. C., Tirado-Rives, J., and Jorgensen, W. L. (2001). Estimation of binding affinities for HEPT and nevirapine analogs with HIV-1 reverse transcriptase via Monte Carlo simulations. J. Med. Chem., 44, 145-154.
-
(2001)
J. Med. Chem.
, vol.44
, pp. 145-154
-
-
Rizzo, R.C.1
Tirado-Rives, J.2
Jorgensen, W.L.3
-
19
-
-
0037019283
-
Prediction of activity for non-nucleoside inhibitors with HIV reverse transcriptase based on Monte Carlo simulations
-
Rizzo, R. C., Blagovic, M. U., Wang, D.-P., Watkins, E. K., Smith, M. B. K. K., Smith, R. H., Jr., Tirado-Rives, J., and Jorgensen, W. L. (2002). Prediction of activity for non-nucleoside inhibitors with HIV reverse transcriptase based on Monte Carlo simulations. J. Med. Chem., 45, 2970-2987.
-
(2002)
J. Med. Chem.
, vol.45
, pp. 2970-2987
-
-
Rizzo, R.C.1
Blagovic, M.U.2
Wang, D.-P.3
Watkins, E.K.4
Smith, M.B.K.K.5
Smith Jr., R.H.6
Tirado-Rives, J.7
Jorgensen, W.L.8
-
20
-
-
0038416105
-
Molecular modeling calculations of, HIV-1 reverse transcriptase nonnucleoside inhibitors: Correlation of binding energy with biological activity for novel 2-aryl-substituted benzimidazole analogs
-
Kroeger Smith, M., Hose, B. M., Hawkins, A., Lipchock, J., Farnsworth, D. W., Rizzo, R. C., Tirado-Rives, Arnold, E., Zhang, W.. Hughes, S. H., Jorgensen, W. L., Farnsworth, D. W., Michejda, C. J., and Smith, R. H., Jr. (2003). Molecular modeling calculations of, HIV-1 reverse transcriptase nonnucleoside inhibitors: correlation of binding energy with biological activity for novel 2-aryl-substituted benzimidazole analogs, J. Med. Chem., 46, 1940-1947.
-
(2003)
J. Med. Chem.
, vol.46
, pp. 1940-1947
-
-
Kroeger Smith, M.1
Hose, B.M.2
Hawkins, A.3
Lipchock, J.4
Farnsworth, D.W.5
Rizzo, R.C.6
Tirado-Rives Arnold, E.7
Zhang, W.8
Hughes, S.H.9
Jorgensen, W.L.10
Farnsworth, D.W.11
Michejda, C.J.12
Smith Jr., R.H.13
-
21
-
-
0031463691
-
Synthesis and biological activity of novel nonnucleoside inhibitors of HIV-1 reverse transcriptase. 2-Aryl-substituted benzimidazoles
-
Roth, T., Morningstar, M. L., Boyer, P. L., Hughes, S. H., Buckheit, R. W., Jr., and Michejda, C. J. (1997). Synthesis and biological activity of novel nonnucleoside inhibitors of HIV-1 reverse transcriptase. 2-Aryl-substituted benzimidazoles. J. Med. Chem., 40, 4199-4207.
-
(1997)
J. Med. Chem.
, vol.40
, pp. 4199-4207
-
-
Roth, T.1
Morningstar, M.L.2
Boyer, P.L.3
Hughes, S.H.4
Buckheit Jr., R.W.5
Michejda, C.J.6
-
22
-
-
4344586146
-
Synthesis and biological activity of potent non-nucleoside inhibitors of HIV-1 reverse transcriptase that retain activity against mutant forms of the enzyme
-
to appear
-
Morningstar, M. L., Roth, T., Smith, M. Kroeger, Zajac, M., Watson, K., Buckheit, R. W., Jr., and Michejda, C. J. (2004). Synthesis and biological activity of potent non-nucleoside inhibitors of HIV-1 reverse transcriptase that retain activity against mutant forms of the enzyme. J. Med. Chem., to appear.
-
(2004)
J. Med. Chem.
-
-
Morningstar, M.L.1
Roth, T.2
Smith, M.3
Kroeger Zajac, M.4
Watson, K.5
Buckheit Jr., R.W.6
Michejda, C.J.7
-
23
-
-
0029075207
-
Structure of HIV-1 RT/TIBO R86183 complex reveals remarkable similarity in the binding of diverse nonnucleoside inhibitors
-
Ding, J., Das, K., Moereels, H., Koymans, L., Andries, K., Janssen, P. A. J., Hughes, S. H., and Arnold, E. (1995). Structure of HIV-1 RT/TIBO R86183 complex reveals remarkable similarity in the binding of diverse nonnucleoside inhibitors. Nature Struct. Biol., 2, 407-415.
-
(1995)
Nature Struct. Biol.
, vol.2
, pp. 407-415
-
-
Ding, J.1
Das, K.2
Moereels, H.3
Koymans, L.4
Andries, K.5
Janssen, P.A.J.6
Hughes, S.H.7
Arnold, E.8
-
24
-
-
0033948752
-
Monte Carlo calculations on HIV-1 reverse transcriptase complexed with the nonnucleoside inhibitor 8-Cl TIBO: Contribution of the L100I and Y181C variants to protein stability and biological activity
-
Kroeger Smith, M. B., Lamb, M. L., Tirado-Rives, J., Jorgensen, W. L., Michejda, C. J., Ruby, S. K., and Smith, R. H., Jr. (2000). Monte Carlo calculations on HIV-1 reverse transcriptase complexed with the nonnucleoside inhibitor 8-Cl TIBO: Contribution of the L100I and Y181C variants to protein stability and biological activity. Prot. Eng., 13, 413-421.
-
(2000)
Prot. Eng.
, vol.13
, pp. 413-421
-
-
Kroeger Smith, M.B.1
Lamb, M.L.2
Tirado-Rives, J.3
Jorgensen, W.L.4
Michejda, C.J.5
Ruby, S.K.6
Smith Jr., R.H.7
-
25
-
-
0030596068
-
Crystal structures of 8-Cl and 9-Cl TIBO complexed with wild-type HIVRT and 8-Cl TIBO complexed with the tyr181 cys HIV-1 RT drug resistant mutant
-
Das, K., Ding, J., Hsiou, Y., Clark, A. D., Jr., Moereels, H., Koymans, L., Andries, K., Pauwels, R., Janssen, P. A. J., Boyer, P. D., Clark, P., Smith, R. H., Jr., Kroeger Smith, M. B., Michejda, C. J., Hughes, S. H., and Arnold, E. (1996). Crystal structures of 8-Cl and 9-Cl TIBO complexed with wild-type HIVRT and 8-Cl TIBO complexed with the tyr181 cys HIV-1 RT drug resistant mutant. J. Mol. Biol., 264, 1085-1100.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 1085-1100
-
-
Das, K.1
Ding, J.2
Hsiou, Y.3
Clark Jr., A.D.4
Moereels, H.5
Koymans, L.6
Andries, K.7
Pauwels, R.8
Janssen, P.A.J.9
Boyer, P.D.10
Clark, P.11
Smith Jr., R.H.12
Kroeger Smith, M.B.13
Michejda, C.J.14
Hughes, S.H.15
Arnold, E.16
-
28
-
-
4344687301
-
-
unpublished data
-
Jorgensen, W. L., unpublished data.
-
-
-
Jorgensen, W.L.1
-
29
-
-
4344667099
-
-
Rutgers University, New Branswick, NJ, unpublished data
-
E. Arnold, Rutgers University, New Branswick, NJ, unpublished data.
-
-
-
Arnold, E.1
-
30
-
-
4344643307
-
-
personal communication
-
R. W. Buckheit, Jr., personal communication.
-
-
-
Buckheit Jr., R.W.1
-
32
-
-
4344636733
-
-
JMP-Jn, Version 4 SAS Institute Inc., Cary, NC
-
JMP-Jn, Version 4 (2001). SAS Institute Inc., Cary, NC.
-
(2001)
-
-
|