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Volumn 13, Issue 9, 2004, Pages 2304-2315

Lipid binding in rice nonspecific lipid transfer protein-1 complexes from Oryza sativa

Author keywords

Antifungal activity; Fatty acid binding; Hydrophobic cavity; Rice nonspecific lipid transfer protein

Indexed keywords

BINDING PROTEIN; FATTY ACID DERIVATIVE; GLYCOLIPID; MYRISTIC ACID; NONSPECIFIC LIPID TRANSFER PROTEIN 1; PALMITIC ACID; PHOSPHOLIPID; STEARIC ACID; STEROID; UNCLASSIFIED DRUG;

EID: 4344577995     PISSN: 09618368     EISSN: None     Source Type: Journal    
DOI: 10.1110/ps.04799704     Document Type: Article
Times cited : (70)

References (29)
  • 1
    • 0036634210 scopus 로고    scopus 로고
    • From elicitins to lipid-transfer proteins: A new insight in cell signalling involved in plant defense mechanisms
    • Blein, J.-P., Coutos-Thevenot, P., Marion, D., and Ponchet, M. 2002. From elicitins to lipid-transfer proteins: A new insight in cell signalling involved in plant defense mechanisms. TRENDS Plant Sci. 7: 293-296.
    • (2002) TRENDS Plant Sci. , vol.7 , pp. 293-296
    • Blein, J.-P.1    Coutos-Thevenot, P.2    Marion, D.3    Ponchet, M.4
  • 3
    • 3543012707 scopus 로고    scopus 로고
    • Crystallography & NMR system: A new software suite for macromolecular structure determination
    • Brunger, A.T. 1998. Crystallography & NMR system: A new software suite for macromolecular structure determination. Acta Crystallogr, D Biol Crystallogr. 54: 905-921.
    • (1998) Acta Crystallogr. D Biol. Crystallogr. , vol.54 , pp. 905-921
    • Brunger, A.T.1
  • 4
    • 0033199578 scopus 로고    scopus 로고
    • The crystal structure of a wheat nonspecific lipid transfer protein (ns-LTP1) complexed with two molecules of phospholipid at 2.1 Å resolution
    • Charvolin, D., Douliez, J.-P., Marion, D., Cohen-Addad, C., and Pebay-Peyroula, E. 1999. The crystal structure of a wheat nonspecific lipid transfer protein (ns-LTP1) complexed with two molecules of phospholipid at 2.1 Å resolution. Eur. J. Biochem. 264: 562-568.
    • (1999) Eur. J. Biochem. , vol.264 , pp. 562-568
    • Charvolin, D.1    Douliez, J.-P.2    Marion, D.3    Cohen-Addad, C.4    Pebay-Peyroula, E.5
  • 5
    • 0034039993 scopus 로고    scopus 로고
    • Ligand-jbinding proteins: Their potential for application in systems for controlled delivery and uptake of ligands
    • De Wolf, F.A. and Brett, G.M. 2000. Ligand-jbinding proteins: Their potential for application in systems for controlled delivery and uptake of ligands. Pharmacol. Rev. 52: 207-236.
    • (2000) Pharmacol. Rev. , vol.52 , pp. 207-236
    • De Wolf, F.A.1    Brett, G.M.2
  • 6
    • 0033853295 scopus 로고    scopus 로고
    • Structure, biological and technological functions of lipid transfer proteins and indolines, the major lipid-binding proteins from cereal kernels
    • Douliez, J.-P., Michon, T., Elmorjani, K., and Marion, D. 2000a. Structure, biological and technological functions of lipid transfer proteins and indolines, the major lipid-binding proteins from cereal kernels. J. Cereal Sci. 32: 1-20.
    • (2000) J. Cereal Sci. , vol.32 , pp. 1-20
    • Douliez, J.-P.1    Michon, T.2    Elmorjani, K.3    Marion, D.4
  • 7
    • 0034738520 scopus 로고    scopus 로고
    • Steady-state tyrosine fluorescence to study the lipid-binding properties of a wheat non-specific lipid-transfer protein (ns-LTP1)
    • Douliez, J.-P., Michon, T., and Marion, D. 2000b. Steady-state tyrosine fluorescence to study the lipid-binding properties of a wheat non-specific lipid-transfer protein (ns-LTP1). Biochim. Biophys. Acta 1467: 65-72.
    • (2000) Biochim. Biophys. Acta , vol.1467 , pp. 65-72
    • Douliez, J.-P.1    Michon, T.2    Marion, D.3
  • 8
    • 0043268759 scopus 로고    scopus 로고
    • Preliminary study on the structural basis of the antifungal activity of a rice lipid transfer protein
    • Ge, X., Chen, J., Sun, C., and Cao, K. 2003. Preliminary study on the structural basis of the antifungal activity of a rice lipid transfer protein. Protein Eng. 16: 387-390.
    • (2003) Protein Eng. , vol.16 , pp. 387-390
    • Ge, X.1    Chen, J.2    Sun, C.3    Cao, K.4
  • 9
    • 0035957527 scopus 로고    scopus 로고
    • Structure basis of non-specific lipid binding in maize lipid-transfer protein complexes revealed by high-resolution x-ray crystallography
    • Han, G.W., Lee, J.Y., Song, H.K., Chang, C., Min, K., Moon, J., Shin, D.H., Kopka, M.L., Sawaya, M.R., Yuan, H.S., et al. 2001. Structure basis of non-specific lipid binding in maize lipid-transfer protein complexes revealed by high-resolution x-ray crystallography. J. Mol. Biol. 308: 263-278.
    • (2001) J. Mol. Biol. , vol.308 , pp. 263-278
    • Han, G.W.1    Lee, J.Y.2    Song, H.K.3    Chang, C.4    Min, K.5    Moon, J.6    Shin, D.H.7    Kopka, M.L.8    Sawaya, M.R.9    Yuan, H.S.10
  • 11
    • 0001309689 scopus 로고
    • Structure, biosynthesis and biodegradation of cutin and suberin
    • Kolattukudy, P.E. 1981. Structure, biosynthesis and biodegradation of cutin and suberin. Annu. Rev. Plant Physiol. 32: 539-568.
    • (1981) Annu. Rev. Plant Physiol. , vol.32 , pp. 539-568
    • Kolattukudy, P.E.1
  • 12
    • 0032548996 scopus 로고    scopus 로고
    • Rice non-specific lipid transfer protein: The 1.6 Å crystal structure in the unliganded state reveals a small hydrophobic cavity
    • Lee, J.Y., Min, K., Cha, H., Shin, D.H., Hwang, K.Y., and Suh, S.W. 1998. Rice non-specific lipid transfer protein: The 1.6 Å crystal structure in the unliganded state reveals a small hydrophobic cavity. J. Mol. Biol. 276: 437-448.
    • (1998) J. Mol. Biol. , vol.276 , pp. 437-448
    • Lee, J.Y.1    Min, K.2    Cha, H.3    Shin, D.H.4    Hwang, K.Y.5    Suh, S.W.6
  • 13
    • 0031700043 scopus 로고    scopus 로고
    • Solution structure of barley lipid transfer protein complexed with palmitate. Two different binding modes of palmitate in the homologous maize and barley nonspecific lipid transfer proteins
    • Lerche, M.H. and Poulsen, P.M. 1998. Solution structure of barley lipid transfer protein complexed with palmitate. Two different binding modes of palmitate in the homologous maize and barley nonspecific lipid transfer proteins. Protein Sci. 7: 2490-2498.
    • (1998) Protein Sci. , vol.7 , pp. 2490-2498
    • Lerche, M.H.1    Poulsen, P.M.2
  • 14
    • 0031568810 scopus 로고    scopus 로고
    • Barley lipid-transfer protein complexed with palmitoyl CoA: The structure reveals a hydrophobic binding site that can expand to fit both large and small lipid-like ligands
    • Lerche, M.H., Kragelund, B.B., Bech, L.M., and Poulsen, P.M. 1997. Barley lipid-transfer protein complexed with palmitoyl CoA: The structure reveals a hydrophobic binding site that can expand to fit both large and small lipid-like ligands. Structure 5: 291-306.
    • (1997) Structure , vol.5 , pp. 291-306
    • Lerche, M.H.1    Kragelund, B.B.2    Bech, L.M.3    Poulsen, P.M.4
  • 15
    • 0031687653 scopus 로고    scopus 로고
    • Anatomy of protein pockets and cavities: Measurement of binding site geometry and implications for ligand design
    • Liang, J., Edelsbrunner, H., and Woodward, C. 1998. Anatomy of protein pockets and cavities: Measurement of binding site geometry and implications for ligand design. Protein Sci. 7: 1884-1897.
    • (1998) Protein Sci. , vol.7 , pp. 1884-1897
    • Liang, J.1    Edelsbrunner, H.2    Woodward, C.3
  • 16
    • 0036290222 scopus 로고    scopus 로고
    • Purification and characterization of a novel 7-kDa non-specific lipid transfer protein-2 from rice
    • Liu, Y.-J., Samuel, D., Liu, C-H., and Lyu, P.-C. 2002. Purification and characterization of a novel 7-kDa non-specific lipid transfer protein-2 from rice. Biochem. Biophys. Res. Commun. 294: 535-540.
    • (2002) Biochem. Biophys. Res. Commun. , vol.294 , pp. 535-540
    • Liu, Y.-J.1    Samuel, D.2    Liu, C.-H.3    Lyu, P.-C.4
  • 17
    • 0037179714 scopus 로고    scopus 로고
    • A putative lipid transfer protein involved in systemic resistance signalling in Arabidopsis
    • Maldonado, A.M., Dixon, P.A., Lamb, C.J., and Cameron, R.K. 2002. A putative lipid transfer protein involved in systemic resistance signalling in Arabidopsis. Nature 419: 399-403.
    • (2002) Nature , vol.419 , pp. 399-403
    • Maldonado, A.M.1    Dixon, P.A.2    Lamb, C.J.3    Cameron, R.K.4
  • 18
    • 0014432781 scopus 로고
    • Solvent content of protein crystals
    • Matthews, B.W. 1968. Solvent content of protein crystals. J. Mol. Biol. 33: 491-497.
    • (1968) J. Mol. Biol. , vol.33 , pp. 491-497
    • Matthews, B.W.1
  • 19
    • 0032790081 scopus 로고    scopus 로고
    • XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density
    • McRee, D.E. 1999. XtalView/Xfit-a versatile program for manipulating atomic coordinates and electron density. J. Struct. Biol. 125: 156-165.
    • (1999) J. Struct. Biol. , vol.125 , pp. 156-165
    • McRee, D.E.1
  • 20
    • 84920325457 scopus 로고
    • AMoRe: An automated package for molecular replacement
    • Navaza, J. 1994. AMoRe: An automated package for molecular replacement. Acta Crystallogr. A 50: 157-163.
    • (1994) Acta Crystallogr. A , vol.50 , pp. 157-163
    • Navaza, J.1
  • 21
    • 0031059866 scopus 로고    scopus 로고
    • Processing of x-ray diffraction data collected in oscillation mode
    • Otwinowski, Z. and Minor, W. 1997. Processing of x-ray diffraction data collected in oscillation mode. Meth. Enzymol. 276: 307-326.
    • (1997) Meth. Enzymol. , vol.276 , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 23
    • 0033082341 scopus 로고    scopus 로고
    • Solution structure of a lipid transfer protein extracted from rice seeds comparison with homologous proteins
    • Poznanski, J., Sodano, P., Suh, S.W., Lee, J.Y., Ptak, M., and Vovelle, F. 1999. Solution structure of a lipid transfer protein extracted from rice seeds comparison with homologous proteins. Eur. J. Biochem. 259: 692-708.
    • (1999) Eur. J. Biochem. , vol.259 , pp. 692-708
    • Poznanski, J.1    Sodano, P.2    Suh, S.W.3    Lee, J.Y.4    Ptak, M.5    Vovelle, F.6
  • 25
    • 0029643949 scopus 로고
    • High-resolution crystal structure of the non-specific lipid-transfer protein from maize seedlings
    • Shin, D.H., Lee, J.Y., Hwang, K.Y., Kim, K.K., and Suh, S.W. 1995. High-resolution crystal structure of the non-specific lipid-transfer protein from maize seedlings. Structure 3: 189-199.
    • (1995) Structure , vol.3 , pp. 189-199
    • Shin, D.H.1    Lee, J.Y.2    Hwang, K.Y.3    Kim, K.K.4    Suh, S.W.5
  • 26
    • 0030613687 scopus 로고    scopus 로고
    • 1H NMR and fluorescence studies of the complexation of DMPG by wheat non-specific lipid transfer protein. Global fold of the complex
    • Sodano, P., Caille, A., Sy, D., de Person, G., Marion, D., and Ptak, M. 1997. 1H NMR and fluorescence studies of the complexation of DMPG by wheat non-specific lipid transfer protein. Global fold of the complex. FEBS Lett. 416: 130-134.
    • (1997) FEBS Lett. , vol.416 , pp. 130-134
    • Sodano, P.1    Caille, A.2    Sy, D.3    De Person, G.4    Marion, D.5    Ptak, M.6
  • 27
    • 0032036442 scopus 로고    scopus 로고
    • Three drought-responsive members of the nonspecific lipid-transfer protein gene family in Lycopersicon pennellii show different developmental patterns of expression
    • Trevino, M.B. and O'Connell, M.A. 1998. Three drought-responsive members of the nonspecific lipid-transfer protein gene family in Lycopersicon pennellii show different developmental patterns of expression. Plant Physiol. 116: 1461-1468.
    • (1998) Plant Physiol. , vol.116 , pp. 1461-1468
    • Trevino, M.B.1    O'Connell, M.A.2
  • 28
    • 0026554314 scopus 로고
    • Nonspecific lipid transfer protein in castor bean cotyledon cells: Subcellular localization and a possible role in lipid metabolism
    • Tsuboi, S., Osafune, T., Nishimura, M., and Yamada, M. 1992. Nonspecific lipid transfer protein in castor bean cotyledon cells: Subcellular localization and a possible role in lipid metabolism. J. Biochem. (Tokyo) 111: 500-508.
    • (1992) J. Biochem. (Tokyo) , vol.111 , pp. 500-508
    • Tsuboi, S.1    Osafune, T.2    Nishimura, M.3    Yamada, M.4
  • 29
    • 0028922586 scopus 로고
    • LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions
    • Wallace, A.C., Laskowski, R.A., and Thornton, J.M. 1995. LIGPLOT: A program to generate schematic diagrams of protein-ligand interactions. Protein. Eng. 8: 127-134.
    • (1995) Protein. Eng. , vol.8 , pp. 127-134
    • Wallace, A.C.1    Laskowski, R.A.2    Thornton, J.M.3


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