AINTEGUMENTA homolog expression in Gnetum (gymnosperms) and implications for the evolution of ovulate axes in seed plants

Evolution and Development

Volumn 10, Issue 3, 2008, Pages 280-287

  Yamada, Toshihiro ^a   Hirayama, Yumiko ^b   Imaichi, Ryoko ^c   Kato, Masahiro ^b  

^a KANAZAWA UNIVERSITY   (Japan)

^b DEPARTMENT OF BOTANY   (Japan)

^c JAPAN WOMEN'S UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

AINTEGUMENTA PROTEIN, ARABIDOPSIS; ARABIDOPSIS PROTEIN; PRIMER DNA; TRANSCRIPTION FACTOR;

ANGIOSPERM; EVOLUTIONARY BIOLOGY; GYMNOSPERM; HOMOLOGY; SEED;

AMINO ACID SEQUENCE; ARTICLE; BAYES THEOREM; BIOLOGICAL MODEL; COMPARATIVE STUDY; DNA SEQUENCE; EVOLUTION; FLOWER; GENE EXPRESSION REGULATION; GENETICS; GNETUM; HISTOLOGY; IN SITU HYBRIDIZATION; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

AMINO ACID SEQUENCE; ARABIDOPSIS PROTEINS; BASE SEQUENCE; BAYES THEOREM; DNA PRIMERS; EVOLUTION; FLOWERS; GENE EXPRESSION REGULATION, PLANT; GNETUM; IN SITU HYBRIDIZATION; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; TRANSCRIPTION FACTORS;

ARABIDOPSIS; ARABIDOPSIS THALIANA; CONIFEROPHYTA; GNETUM; GNETUM PARVIFOLIUM; GYMNOSPERMAE; PINUS THUNBERGII; SPERMATOPHYTA;

EID: 43249106728     PISSN: 1520541X     EISSN: 1525142X     Source Type: Journal    
DOI: 10.1111/j.1525-142X.2008.00237.x     Document Type: Article

References (50)

1. Abascal, F., Zardoya, R. Posada, D. 2005. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21 : 2104 2105.
2. Baker, S. C., Robimson-Beers, K., Villanueva, J. M., Gaiser, J. C. Gasser, C. S. 1997. Interaction among genes regulating ovule development in Arabidopsis thaliana. Genetics 145 : 1109 1124.
3. Balasubramanian, S. Schneitz, K. 2000. NOZZLE regulates proximal-distal pattern formation, cell proliferation and early sporogenesis during ovule development in Arabidopsis thaliana. Development 127 : 4227 4238.
4. Balasubramanian, S. Schneitz, K. 2002. NOZZLE links proximal-distal and adaxial-abaxial pattern formation during ovule development in Arabidopsis thaliana. Development 129 : 4291 4300.
5. Bouman, F. 1984. The ovule. In B. M. Johri (ed.). Embryology of Angiosperms. Springer-Verlag, Berlin, pp. 123 157.
6. Burleigh, J. G. Mathews, S. 2004. Phylogenetic signal in nucleotide data from seed plants: implications for resolving the seed plant tree of life. Am. J. Bot. 91 : 1599 1613.
7. Coulter, J. M. Chamberlain, C. J. 1917. Morphology of Gymnosperms. 2nd Ed. The University of Chicago Press, Chicago.
8. Crane, P. R. 1985. Phylogenetic analysis of seed plants and the origin of angiosperms. Ann. Mo. Bot. Gard. 72 : 716 793.
9. Douglas, S. J., Chunk, G., Dengler, R. E., Pelecanda, L. Riggs, C. D. 2002. KNAT1 and ERECTA regulate inflorescence architecture in Arabidopsis. Plant Cell 14 : 547 558.
10. Doyle, J. A. 2006. Seed ferns and the origin of angiosperms. J. Torrey Bot. Soc. 133 : 169 209.
11. Doyle, J. A. Donoghue, M. J. 1986. Seed plant phylogeny and the origin of angiosperms: an experimental cladistic approach. Bot. Rev. 52 : 321 431.
12. Doyle, J. J. Doyle, J. L. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem. Bull. 19 : 11 15.
13. Drummond, A. J. Rambaut, A. 2005. Tracer, version 1.3.
14. Drummond, A. J. Rambaut, A. 2006. BEAST, version 1.4.
15. Elliott, R. C., et al. 1996. AINTEGUMENTA, an APETALA2-like gene of Arabidopsis with pleiotropic roles in ovule development and floral organ growth. Plant Cell 8 : 155 168.
16. Felsenstain, J. 1994. PYHLIP (Phylogenetic Inference Package) ver. 3.56. Distributed by author. Department of Genetics, University of Washington, Seattle.
17. Florin, R. 1951. Evolution in cordaites and conifers. Acta Hort. Bergiani 15 : 285 388.
18. Floyd, K. F. Bowman, J. L. 2007. The ancestral developmental tool kit of land plants. Int. J. Plant Sci. 168 : 1 35.
19. Gasser, C. S., Broadhvest, J. Hauser, B. A. 1998. Genetic analysis of ovule development. Annu. Rev. Plant Physiol. Plant Mol. Biol. 49 : 1 24.
20. Gifford, E. M. Foster, A. S. 1988. Morphology and Evolution of Vascular Plants. 3rd Ed. Freeman, New York.
21. Hasebe, M. 1999. Evolution of reproductive organs in land plants. J. Plant Res. 112 : 463 474.
22. Imaichi, R., Kato, M. Okada, H. 1995. Morphology of the outer integument in three primitive angiosperm families. Can. J. Bot. 73 : 1242 1249.
23. Kim, S., Soltis, P. S., Wall, K. Soltis, D. E. 2006. Phylogeny and domain evolution in the APETALA2-like gene family. Mol. Biol. Evol. 23 : 107 120.
24. Klucher, K. M., Chow, H., Reiser, L. Fischer, R. L. 1996. The AINTEGUMENTA gene of Arabidopsis required for ovule and female gametophyte development is related to the floral homeotic gene APETALA2. Plant Cell 8 : 137 153.
25. Krizek, B. A. 1999. Ectopic expression of AINTEGUMENTA in Arabidopsis plants results in increased growth of floral organs. Dev. Genet. 25 : 224 236.
26. Meister, R. J., Kotow, L. M. Gasser, C. S. 2002. SUPERMAN attenuates positive INNER NO OUTER autoregulation to maintain polar development of Arabidopsis ovule outer integuments. Development 129 : 4281 4289.
27. Mizukami, Y. Fischer, R. L. 2000. Plant organ size control: AINTEGUMENTA regulates growth and cell numbers during organogenesis. Proc. Natl. Acad. Sci. USA 97 : 942 947.
28. Nole-Wilson, S., Tranby, T. L. Krizek, B. A. 2005. AINTEGUMENTA-like (AIL) genes are expressed in young tissues and may specify meristematic or division-competent states. Plant Mol. Biol. 57 : 613 628.
29. Reiser, L., Modrusan, Z. L. M., Samach, A., Ohad, N., Haughn, G. W. Fischer, R. L. 1995. The BELL1 gene encodes a homeodomain protein involved in pattern formation in the Arabidopsis ovule primordium. Cell 83 : 735 742.
30. Robinson-Beers, K., Pruitt, R. E. Gasser, C. S. 1992. Ovule development in wild-type Arabidopsis and two female sterile mutants. Plant Cell 4 : 1237 1249.
31. Sato, Y., Sentoku, N., Miura, Y., Hirochika, H., Kitano, H. Matsuoka, M. 1999. Loss-of-function mutations in the rise homeobox gene OSH15 affect the architecture of internodes resulting in dwarf plants. EMBO J. 18 : 992 1002.
32. Schneitz, K. 1999. The molecular and genetic control of ovule development. Curr. Opin. Plant Biol. 2 : 13 17.
33. Shigyo, M., Hasebe, M. Ito, M. 2006. Molecular evolution of the AP2 subfamily. Gene 366 : 256 265.
34. Shigyo, M. Ito, M. 2004. Analysis of gymnosperm two-AP2-domain-containing genes. Dev. Genes Evol. 214 : 105 114.
35. Shindo, S., Ito, M., Ueda, K., Kato, M. Hasebe, M. 1999. Characterization of MADS genes in the gymnosperm Gnetum parvifolium and its implication on the evolution of reproductive organs in seed plants. Evol. Dev. 1 : 180 190.
36. Sieber, P., Gheyselinck, J., Gross-Hardt, R., Laux, T., Grossniklaus, U. Schneitz, K. 2004. Pattern formation during early ovule development in Arabidopsis thaliana. Dev. Biol. 273 : 321 334.
37. Skinner, J. D., Hill, T. A. Gasser, C. S. 2004. Regulation of ovule development. Plant Cell 16 : S32 S45.
38. Smith, H. M. S. Hake, S. 2003. The interaction of two homeobox genes, BREVIPEDICELLUS and PENNYWISE, regulates internode patterning in the Arabidopsis inflorescence. Plant Cell 15 : 1717 1727.
39. Soltis, D. E., Soltis, P. S. Zanis, M. J. 2002. Phylogeny of seed plants based on evidence from eight genes. Am. J. Bot. 89 : 1670 1681.
40. Stewart, W. N. Rothwell, G. W. 1993. Paleobotany and the Evolution of Plants. 2nd Ed. Cambridge University Press, New York.
41. *and Other Methods). Sinauer, Sunderland, MA.
42. Takaso, T. Bouman, F. 1986. Ovule and seed ontogeny in Gnetum gnemon L. Bot. Mag. Tokyo 99 : 241 266.
43. Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. Higgins, D. G. 1997. The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24 : 4876 4882.
44. Umeda, A., Imaichi, R. Kato, M. 1994. Ovular development and morphology of the outer integument of Magnolia grandiflora (Magnoliaceae). Am. J. Bot. 81 : 361 367.
45. Venglat, S. P., et al. 2002. The homeobox gene BREVIPEDICELLUS is a key regulator of inflorescence architecture in Arabidopsis. Proc. Natl. Acad. Sci. USA 99 : 4730 4735.
46. Winter, K. U., Becker, A., Münster, T., Kim, J. T., Saedler, H. Theissen, G. 1999. MADS-box genes reveal that gnetophytes are more closely related to conifers than to flowering plants. Proc. Natl. Acad. Sci. USA 96 : 7342 7347.
47. Yamada, T., Imaichi, R. Kato, M. 2001a. Developmental morphology of ovules and seeds of Nymphaeales. Am. J. Bot. 88 : 963 974.
48. Yamada, T., Ito, M. Kato, M. 2003. Expression pattern of INNER NO OUTER homologue in Nymphaea (water lily family, Nymphaeaceae). Dev. Genes Evol. 213 : 510 513.
49. Yamada, T., Ito, M. Kato, M. 2004. YABBY2-homologue expression in lateral organs of Amborella trichopoda (Amborellaceae). Int. J. Plant Sci. 165 : 917 924.
50. Yamada, T., Tobe, H., Imaichi, R. Kato, M. 2001b. Developmental morphology of the ovules of Amborella trichopoda (Amborellaceae) and Chloranthus serratus (Chloranthaceae). Bot. J. Linn. Soc. 137 : 277 290.