-
1
-
-
0019593827
-
Parma wallaby herpesvirus infection
-
Acland H.M. Parma wallaby herpesvirus infection. J. Wildl. Dis. 17 (1981) 471-477
-
(1981)
J. Wildl. Dis.
, vol.17
, pp. 471-477
-
-
Acland, H.M.1
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul S.F., Madden T.L., Schäffer A.A., Zhang J., Zhang Z., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucl. Acids Res. 25 (1997) 3389-3402
-
(1997)
Nucl. Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
3
-
-
0036324190
-
Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae)
-
Attoui H., Fang Q., Jaafar F.M., Cantaloube J.F., Biagini P., de Micco P., and de Lamballerie X. Common evolutionary origin of aquareoviruses and orthoreoviruses revealed by genome characterization of Golden shiner reovirus, Grass carp reovirus Striped bass reovirus and golden ide reovirus (genus Aquareovirus, family Reoviridae). J. Gen. Virol. 83 (2002) 1941-1951
-
(2002)
J. Gen. Virol.
, vol.83
, pp. 1941-1951
-
-
Attoui, H.1
Fang, Q.2
Jaafar, F.M.3
Cantaloube, J.F.4
Biagini, P.5
de Micco, P.6
de Lamballerie, X.7
-
4
-
-
0019557754
-
Mortalities associated with herpesvirus infection in captive macropods
-
Callinan R.B., and Kefford B. Mortalities associated with herpesvirus infection in captive macropods. J. Wildl. Dis. 17 (1981) 311-317
-
(1981)
J. Wildl. Dis.
, vol.17
, pp. 311-317
-
-
Callinan, R.B.1
Kefford, B.2
-
5
-
-
33747331509
-
Family herpesviridae
-
Fauquet C.M., Mayo M.A., Maniloff J., Desselberger E., and Ball L.A. (Eds), Academic Press, San Diego
-
Davison A.J., Erberle R., Hayward G.S., McGeoch D.J., Minson A.C., Pellett P.E., Roizman B., Studdert M.J., and Thiry E. Family herpesviridae. In: Fauquet C.M., Mayo M.A., Maniloff J., Desselberger E., and Ball L.A. (Eds). Virus Taxonomy: Classification and Nomenclature of Viruses (2005), Academic Press, San Diego 193-212
-
(2005)
Virus Taxonomy: Classification and Nomenclature of Viruses
, pp. 193-212
-
-
Davison, A.J.1
Erberle, R.2
Hayward, G.S.3
McGeoch, D.J.4
Minson, A.C.5
Pellett, P.E.6
Roizman, B.7
Studdert, M.J.8
Thiry, E.9
-
7
-
-
0036017382
-
rtREV: an amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny
-
Dimmic M.W., Rest J.S., Mindell D.P., and Goldstein R.A. rtREV: an amino acid substitution matrix for inference of retrovirus and reverse transcriptase phylogeny. J. Mol. Evol. 55 (2002) 65-73
-
(2002)
J. Mol. Evol.
, vol.55
, pp. 65-73
-
-
Dimmic, M.W.1
Rest, J.S.2
Mindell, D.P.3
Goldstein, R.A.4
-
8
-
-
3042666256
-
MUSCLE: multiple sequence alignment with high accuracy and high throughput
-
Edgar R.C. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucl. Acids Res. 32 5 (2004) 1792-1797
-
(2004)
Nucl. Acids Res.
, vol.32
, Issue.5
, pp. 1792-1797
-
-
Edgar, R.C.1
-
9
-
-
0000461280
-
Confidence limits on phylogenies: an approach using bootstrap
-
Felsenstein J. Confidence limits on phylogenies: an approach using bootstrap. Evolution 39 (1985) 783-791
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
10
-
-
0000122573
-
PHYLIP-phylogeny inference package
-
Felsenstein J. PHYLIP-phylogeny inference package. Cladistics 5 (1989) 164-166
-
(1989)
Cladistics
, vol.5
, pp. 164-166
-
-
Felsenstein, J.1
-
11
-
-
17144467405
-
Mortalities in parma wallabies (Macropus parma) associated with probable herpesvirus
-
Finnie E.P., Littlejohns I.R., and Acland H.M. Mortalities in parma wallabies (Macropus parma) associated with probable herpesvirus. Aust. Vet. J. 52 (1976) 294
-
(1976)
Aust. Vet. J.
, vol.52
, pp. 294
-
-
Finnie, E.P.1
Littlejohns, I.R.2
Acland, H.M.3
-
12
-
-
19044400807
-
Molecular phylogeny of the carnivora (mammalia): assessing the impact of increased sampling on resolving enigmatic relationships
-
Flynn J.J., Finarelli J.A., Zehr S., Hsu J., and Nedbal M.A. Molecular phylogeny of the carnivora (mammalia): assessing the impact of increased sampling on resolving enigmatic relationships. Syst. Biol. 54 (2005) 317-337
-
(2005)
Syst. Biol.
, vol.54
, pp. 317-337
-
-
Flynn, J.J.1
Finarelli, J.A.2
Zehr, S.3
Hsu, J.4
Nedbal, M.A.5
-
13
-
-
0344304518
-
A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae
-
Gonzalez J.M., Gomez-Puertas P., Cavanagh D., Gorbalenya A.E., and Enjuanes L. A comparative sequence analysis to revise the current taxonomy of the family Coronaviridae. Arch. Virol. 148 (2003) 2207-2235
-
(2003)
Arch. Virol.
, vol.148
, pp. 2207-2235
-
-
Gonzalez, J.M.1
Gomez-Puertas, P.2
Cavanagh, D.3
Gorbalenya, A.E.4
Enjuanes, L.5
-
14
-
-
0032860413
-
Reactivation of a macropodid herpesvirus from the eastern grey kangaroo (Macropus giganteus) following corticosteroid treatment
-
Guliani S., Smith G.A., Young P.L., Mattick J.S., and Mahony T.J. Reactivation of a macropodid herpesvirus from the eastern grey kangaroo (Macropus giganteus) following corticosteroid treatment. Vet. Microbiol. 68 (1999) 59-69
-
(1999)
Vet. Microbiol.
, vol.68
, pp. 59-69
-
-
Guliani, S.1
Smith, G.A.2
Young, P.L.3
Mattick, J.S.4
Mahony, T.J.5
-
15
-
-
15944419185
-
The effect of paralogous lineages on the application of reconciliation analysis by cophylogeny mapping
-
Jackson A.P. The effect of paralogous lineages on the application of reconciliation analysis by cophylogeny mapping. Syst. Biol. 54 (2005) 127-145
-
(2005)
Syst. Biol.
, vol.54
, pp. 127-145
-
-
Jackson, A.P.1
-
16
-
-
0022262078
-
Macropodid herpesvirus 1 and 2: two herpesviruses from Australian marsupials differentiated by restriction endonucleases DNA composition and hybridisation
-
Johnson M.A., Whalley J.M., Littlejohns I.R., Smith V.W., Wilks C.R., and Reisner A.H. Macropodid herpesvirus 1 and 2: two herpesviruses from Australian marsupials differentiated by restriction endonucleases DNA composition and hybridisation. Arch. Virol. 85 (1985) 313-319
-
(1985)
Arch. Virol.
, vol.85
, pp. 313-319
-
-
Johnson, M.A.1
Whalley, J.M.2
Littlejohns, I.R.3
Smith, V.W.4
Wilks, C.R.5
Reisner, A.H.6
-
17
-
-
0025644244
-
Structure and physical map of the genome of parma wallaby herpesvirus
-
Johnson M.A., and Whalley J.M. Structure and physical map of the genome of parma wallaby herpesvirus. Virus Res. 18 (1990) 41-48
-
(1990)
Virus Res.
, vol.18
, pp. 41-48
-
-
Johnson, M.A.1
Whalley, J.M.2
-
18
-
-
0026691182
-
The rapid generation of mutation data matrices from protein sequences
-
Jones D.T., Taylor W.R., and Thornton J.M. The rapid generation of mutation data matrices from protein sequences. Comput. Appl. Biosci. 8 3 (1992) 275-282
-
(1992)
Comput. Appl. Biosci.
, vol.8
, Issue.3
, pp. 275-282
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
19
-
-
0031904908
-
Evolution of viral DNA-dependent DNA polymerases
-
Knopf C.W. Evolution of viral DNA-dependent DNA polymerases. Virus Genes 16 (1998) 47-58
-
(1998)
Virus Genes
, vol.16
, pp. 47-58
-
-
Knopf, C.W.1
-
20
-
-
12344269158
-
Different versions of the Dayhoff rate matrix
-
Kosiol C., and Goldman N. Different versions of the Dayhoff rate matrix. Mol. Biol. Evol. 22 2 (2005) 193-199
-
(2005)
Mol. Biol. Evol.
, vol.22
, Issue.2
, pp. 193-199
-
-
Kosiol, C.1
Goldman, N.2
-
21
-
-
0032991872
-
Analysis of the thymidine kinase genes of macropodid herpesviruses 1 and 2
-
Lee S.M., and Smith G.A. Analysis of the thymidine kinase genes of macropodid herpesviruses 1 and 2. Arch. Virol. 144 (1999) 397-405
-
(1999)
Arch. Virol.
, vol.144
, pp. 397-405
-
-
Lee, S.M.1
Smith, G.A.2
-
22
-
-
0034331565
-
Common metastatic carcinoma of California sea lions (Zalophus californianus): evidence of genital origin and association with novel gammaherpesvirus
-
Lipscomb T.P., Scott D.P., Garber R.L., Krafft A.E., Tsai M.M., Lichy J.H., Taubenberger J.K., Schulman F.Y., and Gulland F.M.D. Common metastatic carcinoma of California sea lions (Zalophus californianus): evidence of genital origin and association with novel gammaherpesvirus. Vet. Pathol. 37 (2000) 609-617
-
(2000)
Vet. Pathol.
, vol.37
, pp. 609-617
-
-
Lipscomb, T.P.1
Scott, D.P.2
Garber, R.L.3
Krafft, A.E.4
Tsai, M.M.5
Lichy, J.H.6
Taubenberger, J.K.7
Schulman, F.Y.8
Gulland, F.M.D.9
-
23
-
-
0033046565
-
Macropodid herpesviruses 1 and 2 occupy unexpected molecular phylogenic positions within the Alphaherpesvirinae
-
Mahony T.J., Smith G.A., and Thomson D.M. Macropodid herpesviruses 1 and 2 occupy unexpected molecular phylogenic positions within the Alphaherpesvirinae. J. Gen. Virol. 80 (1999) 433-436
-
(1999)
J. Gen. Virol.
, vol.80
, pp. 433-436
-
-
Mahony, T.J.1
Smith, G.A.2
Thomson, D.M.3
-
24
-
-
11144244968
-
Integrating reptilian herpesviruses into the family Herpesviridae
-
McGeoch D.J., and Gatherer D. Integrating reptilian herpesviruses into the family Herpesviridae. J. Virol. 79 (2005) 725-731
-
(2005)
J. Virol.
, vol.79
, pp. 725-731
-
-
McGeoch, D.J.1
Gatherer, D.2
-
25
-
-
13644265957
-
On phylogenetic relationships among major lineages of the Gammaherpesvirinae
-
McGeoch D.J., Gatherer D., and Dolan A. On phylogenetic relationships among major lineages of the Gammaherpesvirinae. J. Gen. Virol. 86 (2005) 307-316
-
(2005)
J. Gen. Virol.
, vol.86
, pp. 307-316
-
-
McGeoch, D.J.1
Gatherer, D.2
Dolan, A.3
-
26
-
-
33645054794
-
Topics in herpesvirus genomics and evolution
-
McGeoch D.J., Rixon F.J., and Davison A.J. Topics in herpesvirus genomics and evolution. Virus Res. 117 (2006) 90-104
-
(2006)
Virus Res.
, vol.117
, pp. 90-104
-
-
McGeoch, D.J.1
Rixon, F.J.2
Davison, A.J.3
-
27
-
-
0030934592
-
Effects of nucleotide sequence alignment on phylogeny estimation: a case study of 18S rDNAs of Apicomplexa
-
Morrison D.A., and Ellis J.T. Effects of nucleotide sequence alignment on phylogeny estimation: a case study of 18S rDNAs of Apicomplexa. Mol. Biol. Evol. 14 (1997) 428-441
-
(1997)
Mol. Biol. Evol.
, vol.14
, pp. 428-441
-
-
Morrison, D.A.1
Ellis, J.T.2
-
28
-
-
0034623005
-
T-Coffee: a novel method for fast and accurate multiple sequence alignment
-
Notredame C., Higgins D.G., and Heringa J. T-Coffee: a novel method for fast and accurate multiple sequence alignment. J. Mol. Biol. 302 1 (2000) 205-217
-
(2000)
J. Mol. Biol.
, vol.302
, Issue.1
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
29
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 12 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, Issue.12
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
30
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignments through sequence weighting, position specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignments through sequence weighting, position specific gap penalties and weight matrix choice. Nucl. Acids Res. 22 (1994) 4673-4680
-
(1994)
Nucl. Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
31
-
-
0029952477
-
Detection and analysis of diverse herpesviral species by consensus primer PCR
-
VanDevanter D.R., Warrener P., Bennett L., Schultz E.R., Coulter S., Garber R.L., and Rose T.M. Detection and analysis of diverse herpesviral species by consensus primer PCR. J. Clin. Microbiol. 34 (1996) 1666-1671
-
(1996)
J. Clin. Microbiol.
, vol.34
, pp. 1666-1671
-
-
VanDevanter, D.R.1
Warrener, P.2
Bennett, L.3
Schultz, E.R.4
Coulter, S.5
Garber, R.L.6
Rose, T.M.7
-
32
-
-
33244457500
-
The platypus is in its place: nuclear genes and indels confirm the sister group relation of monotremes and Therians
-
van Rheede T., Bastiaans T., Boone D.N., Hedges S.B., de Jong W.W., and Madsen O. The platypus is in its place: nuclear genes and indels confirm the sister group relation of monotremes and Therians. Mol. Biol. Evol. 23 (2006) 587-597
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 587-597
-
-
van Rheede, T.1
Bastiaans, T.2
Boone, D.N.3
Hedges, S.B.4
de Jong, W.W.5
Madsen, O.6
-
33
-
-
0742286995
-
A transition probability model for amino acid substitutions from blocks
-
Veerassamy S., Smith A., and Tillier E.R. A transition probability model for amino acid substitutions from blocks. J. Comput. Biol. 10 6 (2003) 997-1010
-
(2003)
J. Comput. Biol.
, vol.10
, Issue.6
, pp. 997-1010
-
-
Veerassamy, S.1
Smith, A.2
Tillier, E.R.3
-
34
-
-
0018072335
-
Widespread occurrence in Australian marsupials of neutralizing antibodies to a herpesvirus from a parma wallaby
-
Webber C.E., and Whalley J.M. Widespread occurrence in Australian marsupials of neutralizing antibodies to a herpesvirus from a parma wallaby. Aust. J. Exp. Biol. Med. Sci. 56 (1978) 351-357
-
(1978)
Aust. J. Exp. Biol. Med. Sci.
, vol.56
, pp. 351-357
-
-
Webber, C.E.1
Whalley, J.M.2
-
35
-
-
8644289596
-
A novel herpesvirus associated with hepatic necrosis in a San Esteban chuckwalla (Sauromalus varius)
-
Wellehan J.F.X., Jarchow J.L., Reggiardo C., and Jacobson E.R. A novel herpesvirus associated with hepatic necrosis in a San Esteban chuckwalla (Sauromalus varius). J. Herpetol. Med. Surg. 13 (2003) 15-19
-
(2003)
J. Herpetol. Med. Surg.
, vol.13
, pp. 15-19
-
-
Wellehan, J.F.X.1
Jarchow, J.L.2
Reggiardo, C.3
Jacobson, E.R.4
-
36
-
-
0035031966
-
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
-
Whelan S., and Goldman N. A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol. Biol. Evol. 18 (2001) 691-699
-
(2001)
Mol. Biol. Evol.
, vol.18
, pp. 691-699
-
-
Whelan, S.1
Goldman, N.2
-
37
-
-
0019408162
-
Herpesvirus as a cause of fatal disease in Australian wallabies
-
Wilks C.R., Kefford B., and Callinan R.B. Herpesvirus as a cause of fatal disease in Australian wallabies. J. Comp. Path. 91 (1981) 461-465
-
(1981)
J. Comp. Path.
, vol.91
, pp. 461-465
-
-
Wilks, C.R.1
Kefford, B.2
Callinan, R.B.3
-
38
-
-
1642312892
-
Experimental infection of possums with macropodid herpesvirus 1
-
Zheng T., Napier A.M., O'Keefe J.S., and Buddle B.M. Experimental infection of possums with macropodid herpesvirus 1. N. Z. Vet. J. 52 (2004) 20-25
-
(2004)
N. Z. Vet. J.
, vol.52
, pp. 20-25
-
-
Zheng, T.1
Napier, A.M.2
O'Keefe, J.S.3
Buddle, B.M.4
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