Identification of novel horA-harbouring bacteria capable of spoiling beer

Canadian Journal of Microbiology

Volumn 54, Issue 4, 2008, Pages 321-325

  Haakensen, Monique ^a   Ziola, Barry ^a  

^a UNIVERSITY OF SASKATCHEWAN   (Canada)

Author keywords

Beer spoilage bacteria; Firmicutes; horA

Indexed keywords

BEER SPOILAGE; STAPHYLOCOCCUS EPIDERMIDIS;

FERMENTATION; GENES; GROWTH KINETICS; PROTEINS;

BACTERIA;

ABC TRANSPORTER; AMINO ACID DERIVATIVE; BACTERIAL PROTEIN; MULTIDRUG RESISTANCE PROTEIN; PROTEIN HORA; UNCLASSIFIED DRUG;

BACTERIUM; GENE; IDENTIFICATION METHOD; ISOLATED POPULATION; PHYLOGENETICS;

ARTICLE; BACILLUS CEREUS; BACILLUS LICHENIFORMIS; BACTERIAL GROWTH; BEER; GENE CLUSTER; GENE SEQUENCE; GRAM POSITIVE BACTERIUM; ISOLATION PROCEDURE; LACTOBACILLUS; NONHUMAN; NUCLEOTIDE SEQUENCE; PAENIBACILLUS; PEDIOCOCCUS; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN ANALYSIS; RNA TRANSLATION; STAPHYLOCOCCUS EPIDERMIDIS;

ATP-BINDING CASSETTE TRANSPORTERS; BACILLUS; BACILLUS CEREUS; BACTERIAL PROTEINS; BASE SEQUENCE; BEER; DRUG RESISTANCE, MULTIPLE; FOOD CONTAMINATION; GENES, MDR; GRAM-POSITIVE BACTERIA; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ANALYSIS, DNA; STAPHYLOCOCCUS EPIDERMIDIS;

BACILLUS (BACTERIUM); BACILLUS CEREUS; BACILLUS LICHENIFORMIS; BACTERIA (MICROORGANISMS); FIRMICUTES; LACTOBACILLUS; PAENIBACILLUS; PEDIOCOCCUS; POSIBACTERIA; STAPHYLOCOCCUS; STAPHYLOCOCCUS EPIDERMIDIS;

EID: 42149164288     PISSN: 00084166     EISSN: None     Source Type: Journal    
DOI: 10.1139/W08-007     Document Type: Article

References (13)

1. Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipman, D.J. 1990. Basic local alignment search tool. J. Mol. Biol. 215: 403-410. PMID:2231712.
2. Campbell, I. 2001. Food fermentations. In Food microbiology. Edited by M.P. Doyle, L.R. Beuchat, and T.J. Montville. ASM Press, Washington, D.C. pp. 742-744.
3. Dobson, C.M., Deneer, H., Lee, S., Hemmingsen, S., Glaze, S., and Ziola, B. 2002. Phylogenetic analysis of the genus Pediococcus, including Pediococcus claussenii sp. nov., a novel lactic acid bacterium isolated from beer. Int. J. Syst. Evol. Microbiol. 52: 2003-2010. doi:10.1099/ijs.0.02191-0. PMID:12508860.
4. Granum, P.E. 2001. Foodborne pathogenic bacteria. In Food microbiology. Edited by M.P. Doyle, L.R. Beuchat, and T.J. Montville. ASM Press, Washington, D.C. pp. 373-381.
5. Haakensen, M.C., Butt, L., Chaban, B., Deneer, H., Ziola, B., and Dowgiert, T. 2007. AhorA-specific real-time PCR for detection of beerspoilage lactic acid bacteria. J. Am. Soc. Brew. Chem. 65: 157-165.
6. Haakensen, M., Schubert, A., and Ziola, B. 2008. Multiplex PCR for putative Lactobacillus and Pediococcus beer-spoilage genes and ability of gene presence to predict growth in beer. J. Am. Soc. Brew. Chem. 66: In press.
7. Kumar, S., Tamura, K., Jakobsen, I.B., and Nei, M. 2001. MEGA2: molecular evolutionary genetics analysis software. Bioinformatics, 17: 1244-1245. doi:10.1093/bioinformatics/17.12.1244. PMID:11751241.
8. Nicholas, K.B., Nicholas, H.B., Jr., and Deerfield, D.W., II. 1997. Genedoc: analysis and visualization of genetic variation EMBNEW. News, 4: 14.
9. Pirttijärvi, T.S.M., Andersson, M.A., and Salkinoja-Salonen, M.S. 2000. Properties of Bacillus cereus and other bacilli contaminating biomaterial-based industrial processes. Int. J. Food Microbiol. 60: 231-239. doi:10.1016/S0168-1605(00)00313-5. PMID:11016612.
10. Priest, F.G., and Campbell, I. 2002. Brewing microbiology. 3rd ed. Kluwer Academic Publishers, N.Y.
11. Sakamoto, K., and Konings, W.N. 2003. Beer spoilage bacteria and hop resistance. Int. J. Food Microbiol. 89: 105-124. doi:10.1016/S0168- 1605(03)00153-3. PMID:14623377.
12. Sami, M., Yamashita, H., Hirono, T., Kadokura, H., Kitamoto, K., Yoda, K., and Yamasaki, M. 1997. Hop-resistant Lactobacillus brevis contains a novel plasmid harbouring a multidrug resistance-like gene. J. Ferment. Bioeng. 84: 1-6. doi:10.1016/S0922-338X(97)82778-X.
13. Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. 1997. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882. doi:10.1093/nar/25.24.4876. PMID:9396791.