Orthomyxo-, paramyxo- and flavivirus infections in wild waterfowl in Finland

Virology Journal

Volumn 5, Issue , 2008, Pages

  Lindh, Erika ^a   Huovilainen, Anita ^b   Rätti, Osmo ^c   Ek Kommonen, Christine ^b   Sironen, Tarja ^a   Huhtamo, Eili ^a   Pöysä, Hannu ^e   Vaheri, Antti ^a,f   Vapalahti, Olli ^a,d,f  

^a UNIVERSITY OF HELSINKI   (Finland)

^b NATL VET AND FOOD RES INSTITUTE   (Finland)

^c UNIVERSITY OF LAPLAND   (Finland)

^d UNIVERSITY OF HELSINKI   (Finland)

^e FINNISH FOREST RESEARCH INSTITUTE   (Finland)

^f HELSINKI UNIVERSITY CENTRAL HOSPITAL   (Finland)

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL TISSUE; ARTICLE; BLOOD SAMPLING; CONTROLLED STUDY; ENZYME LINKED IMMUNOSORBENT ASSAY; FINLAND; FLAVIVIRUS; HEMAGGLUTINATION INHIBITION TEST; INFLUENZA VIRUS A; NONHUMAN; NUCLEOTIDE SEQUENCE; ORTHOMYXOVIRUS INFECTION; PARAMYXOVIRUS; PHYLOGENY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA VIRUS INFECTION; SEROLOGY; SINDBIS VIRUS; TICK BORNE ENCEPHALITIS FLAVIVIRUS; UNINDEXED SEQUENCE; VIRUS INFECTION; VIRUS ISOLATION; WEST NILE FLAVIVIRUS; ANIMAL; ANIMAL DISEASE; AVIAN INFLUENZA; BIRD DISEASE; BLOOD; CLOACA; DNA SEQUENCE; DUCK; GENETICS; GOOSE; INFLUENZA VIRUS A H3N8; ISOLATION AND PURIFICATION; LABORATORY DIAGNOSIS; MOLECULAR GENETICS; NEWCASTLE DISEASE PARAMYXOVIRUS; TRACHEA; VIROLOGY; WILD ANIMAL;

ANATIDAE; APPLE MOSAIC VIRUS; AVES; FLAVIVIRUS; INFLUENZA A VIRUS; NEWCASTLE DISEASE VIRUS; TICK-BORNE ENCEPHALITIS VIRUS;

ANIMALS; ANIMALS, WILD; BIRD DISEASES; BLOOD; CLOACA; DUCKS; FINLAND; FLAVIVIRUS; FLAVIVIRUS INFECTIONS; GEESE; INFLUENZA A VIRUS, H3N8 SUBTYPE; INFLUENZA IN BIRDS; MOLECULAR SEQUENCE DATA; NEWCASTLE DISEASE; NEWCASTLE DISEASE VIRUS; PHYLOGENY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SPECIMEN HANDLING; TRACHEA;

EID: 42149138139     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/1743-422X-5-35     Document Type: Article

References (64)

1. Evolution and ecology of influenza A viruses. RG Webster WJ Bean OT Gorman TM Chambers Y Kawaoka, Microbiol Rev 1992 56 152 179 1579108
2. Characterization of a novel influenza A virus hemagglutinin subtype (H16) obtained from black-headed gulls. RA Fouchier V Munster A Wallensten TM Bestebroer S Herfst D Smith GF Rimmelzwaan B Olsen AD Osterhaus, J Virol 2005 79 2814 2822 15709000 10.1128/JVI.79.5.2814-2822.2005
3. The World Organisation for Animal Health (OIE). http://www.oie.int/eng/ info_ev/en_AI_avianinfluenza.htm
4. Global patterns of influenza A virus in wild birds. B Olsen VJ Munster A Wallensten J Waldenstrom AD Osterhaus RA Fouchier, Science 2006 312 384 388 10.1126/science.1122438 16627734
5. Influenza A virus surveillance in wild birds in Northern Europe in 1999 and 2000. RA Fouchier B Olsen TM Bestebroer S Herfst L van der Kemp GF Rimmelzwaan AD Osterhaus, Avian Dis 2003 47 857 860 14575077
6. High prevalence of influenza A virus in ducks caught during spring migration through Sweden. A Wallensten VJ Munster M Karlsson A Lundkvist M Brytting M Stervander AD Osterhaus RA Fouchier B Olsen, Vaccine 2006 24 6734 6735 10.1016/j.vaccine.2006.05.057 16815603
7. Occurrence of influenza A viruses and their antibodies in migratory birds in Finland. T Estola P Saikku M Pirkola I Hakkinen P Veijalainen C Ek-Kommonen, Nord Vet Med 1980 32 321 324 7232144
8. CM Fauquet MA Mayo J Maniloff U Desselberger LA Ball, Virus Taxonomy, Classification and Nomenclature of Viruses. Eighth ICTV Report Elsevier: Academic Press 2005
9. The avian response to Newcastle disease virus. BS Seal DJ King HS Sellers, Dev Comp Immunol 2000 24 257 268 10.1016/S0145-305X(99)00077-4 10717292
10. Generation of velogenic Newcastle disease viruses from a nonpathogenic waterfowl isolate by passaging in chickens. Y Shengqing N Kishida H Ito H Kida K Otsuki Y Kawaoka T Ito, Virology 2002 301 206 211 10.1006/viro.2002.1539 12359423
11. Pathogenicity and phylogenetic evaluation of the variant Newcastle disease viruses termed "pigeon PMV-1 viruses" based on the nucleotide sequence of the fusion protein gene. MS Collins I Strong DJ Alexander, Arch Virol 1996 141 635 647 10.1007/BF01718322 8645100
12. Antigenic and phylogenetic studies on a variant Newcastle disease virus using anti-fusionprotein monoclonal antibodies and partial sequencing of the fusion protein gene. MS Collins S Franklin I Strong G Meulmans DJ Alexander, Avian Pathol 1998 27 90 96 10.1080/03079459808419279
13. Newcastle disease outbreaks in recent years in Western Europe were caused by an old (VI) and a novel genotype (VII). B Lomniczi E Wehmann J Herczeg A Ballagi-Pordany EF Kaleta O Werner G Meulemans PH Jorgensen AP Mante AL Gielkens I Capua J Damoser, Arch Virol 1998 143 49 64 10.1007/s007050050267 9505965
14. Two novel genetic groups (VIIb and VIII) responsible for recent Newcastle disease outbreaks in Southern Africa, one (VIIb) of which reached Southern Europe. J Herczeg E Wehmann R Bragg P Travassos Dias G Hadjiev O Werner B Lomniczi, Arch Virol 1999 144 2087 2099 10.1007/s007050050624 10603164
15. A molecular epidemiological study of avian paramyxovirus type 1 (Newcastle disease virus) isolates by phylogenetic analysis of partial nucleotide sequence of the fusion protein gene. E Aldous J Mynn J Banks DJ Alexander, Avian Pathol 2003 32 239 257 10.1080/0307945031000097831 12850913
16. Newcastle disease virus fusion and haemagglutinin-neuraminidase gene motifs as markers for viral lineage. A Gould E Hansson K Selleck J Kattenbelt M Mackenzie A Della-Porta, Avian Pathol 2003 32 361 373 10.1080/ 0307945031000121112 17585460
17. Third genome size category of avian paramyxovirus serotype 1 (Newcastle disease virus) and evolutionary implications. A Czegledi D Ujvari E Somogyi E Wehmann O Werner B Lomniczi, Virus Res 2006 120 36 48 10.1016/j.virusres.2005. 11.009 16766077
18. The epidemiology and control of avian influenza and Newcastle disease. DJ Alexander, J Comp Path 1995 112 105 126 10.1016/S0021-9975(05)80054-4 7769142
19. Genomic sequences of low-virulence paramyxovirus-1 (Newcastle disease virus) isolates obtained from live-bird markets in North America not related to commonly utilized commercial vaccine strains. B Seal M Wise J Pedersen D Senne R Alvarez M Scott D King Q Yu D Kapczynski, Vet Microbiol 2005 106 7 16 10.1016/j.vetmic.2004.11.013 15737469
20. T Estola C Wahlberg R Berger, Observations on an enzootic outbreak of Newcastle disease in the Helsinki zoo. Proc. 13th International Symposium on Zoo Animals in Helsinki Academik Verlag, Berlin 277 281
21. Isolation of a Finnish Newcastle disease virus with an exceptionally high thermostability. T Estola, Avian Dis 1974 18 274 277 10.2307/1589141 4828586
22. Phylogenetic analysis of avian paramyxovirus 1 strains isolated in Finland. A Huovilainen C Ek-Kommonen R Manvell L Kinnunen, Arch Virol 2001 146 1775 1785 10.1007/s007050170063 11699962
23. Clinical and laboratory manifestations of Sindbis virus infection: Prospective study, Finland, 2002-2003. S Kurkela T Manni J Myllynen A Vaheri O Vapalahti, J Infect Dis 2005 191 1820 1829 10.1086/430007 15871114
24. Epidemiology of Sindbis virus infections in Finland 1981-96: Possible factors explaining a peculiar disease pattern. M Brummer-Korvenkontio O Vapalahti P Kuusisto P Saikku T Manni P Koskela T Nygren H Brummer-Korvenkontio A Vaheri, Epidemiol Infect 2002 129 335 345 10.1017/S0950268802007409 12403109
25. Sindbis virus infection in resident birds, migratory birds, and humans, Finland. S Kurkela O Rätti E Huhtamo NY Uzcátegui PJ Nuorti J Laakkonen T Manni P Helle A Vaheri O Vapalahti, Emerg Infect Dis 2008 14 1 41 47 18258075
26. Viral zoonoses in Europe. H Kallio-Kokko N Uzcategui O Vapalahti A Vaheri, FEMS Microbiol Rev 2005 29 1051 1077 10.1016/j.femsre.2005.04.012 16024128
27. Entomologic and avian investigations of an epidemic of West Nile fever in Romania in with serologic and molecular characterization of a virus isolate from mosquitoes. HM Savage C Ceianu G Nicolescu N Karabatsos R Lanciotti A Vladimirescu L Laiv A Ungureanu C Romanca TF Tsai, Am J Trop Med Hyg 1999 61 4 600 611 10548295
28. West Nile outbreak in horses in Southern France, 2000: The return after 35 years. B Murgue S Murri S Zientara B Durand JP Durand H Zeller, Emerg Infect Dis 2001 7 692 696 11585534
29. The emergence of West Nile virus in North America: Ecology, epidemiology, and surveillance. JT Roehrig M Layton P Smith GL Campbell R Nasci RS Lanciotti, Curr Top Microbiol Immunol 2002 267 223 240 12082991
30. West Nile virus: Epidemiology and ecology in north america. N Komar, Adv Virus Res 2003 61 185 234 14714433
31. Serological evidence of West Nile virus, Usutu virus and Sindbis virus infection of birds in the UK. A Buckley A Dawson SR Moss SA Hinsley PE Bellamy EA Gould, J Gen Virol 2003 84 2807 2817 10.1099/vir.0.19341-0 13679615
32. Migrating birds and tickborne encephalitis virus. J Waldenstrom A Lundkvist KI Falk U Garpmo S Bergstrom G Lindegren A Sjostedt H Mejlon T Fransson PD Haemig B Olsen, Emerg Infect Dis 2007 13 1215 1218 17953095
33. Comparison of flavivirus universal primer pairs and development of a rapid, highly sensitive heminested reverse transcription-PCR assay for detection of flaviviruses targeted to a conserved region of the NS5 gene sequences. N Scaramozzino JM Crance A Jouan DA DeBriel F Stoll D Garin, J Clin Microbiol 2001 39 1922 1927 11326014 10.1128/JCM.39.5.1922-1927.2001
34. Proteolytic cleavage of the viral glycoproteins and its significance for the virulence of Newcastle disease virus. Y Nagai HD Klenk R Rott, Virology 1976 72 494 508 10.1016/0042-6822(76)90178-1 948870
35. Deduced amino acid sequences at the fusion protein cleavage site of Newcastle disease viruses showing variation in antigenicity and pathogenicity. MS Collins JB Bashiruddin DJ Alexander, Arch Virol 1993 128 363 370 10.1007/BF01309446 8435046
36. Surveillance of influenza A virus in migratory waterfowl in Northern Europe. A Wallensten VJ Munster N Latorre-Margalef M Brytting J Elmberg RA Fouchier T Fransson PD Haemig M Karlsson A Lundkvist AD Osterhaus M Stervander J Waldenstrom O Bjorn, Emerg Infect Dis 2007 13 404 411 17552093
37. Duck influenza lacking evidence of disease signs and immune response. H Kida R Yanagawa Y Matsuoka, Infect Immun 1980 30 547 553 7439994
38. Summary of avian influenza activity in Europe, Asia, Africa, and Australasia, 2002-2006. DJ Alexander, Avian Dis 2007 51 161 166 10.1637/7602-041306R.1 17494548
39. Influenza A viruses of migrating wild aquatic birds in North America. S Krauss D Walker SP Pryor L Niles L Chenghong VS Hinshaw RG Webster, Vector Borne Zoonotic Dis 2004 43 177 189 10.1089/vbz.2004.4.177
40. New avian influenza A virus subtype combination H5N7 identified in Danish mallard ducks. K Bragstad PH Jorgensen KJ Handberg S Mellergaard S Corbet A Fomsgaard, Virus Res 2005 109 181 190 10.1016/j.virusres.2004.12.004 15763149
41. Avian influenza virus screening in wild waterfowl in Norway, 2005. CM Jonassen K Handeland, Avian Dis 2007 51 425 428 10.1637/7555-033106R1.1 17494599
42. Antigenic and genetic characterization of Newcastle disease viruses isolated from outbreaks in domestic fowl and turkeys in Great Britain during 1997. DJ Alexander J Banks MS Collins RJ Manvell KM Frost EC Speidel EW Aldous, Vet Rec 1999 145 417 421 10755586
43. Virulent Newcastle disease in Australia: Molecular epidemiological analysis of viruses isolated prior to and during the outbreaks of 1998-2000. AR Gould JA Kattenbelt P Selleck E Hansson A Della-Porta HA Westbury, Virus Res 2001 77 51 60 10.1016/S0168-1702(01)00265-9 11451487
44. Structural basis of viral invasion: Lessons from paramyxovirus F. RA Lamb TS Jardetzky, Curr Opin Struct Biol 2007 17 427 436 17870467 10.1016/j.sbi.2007.08.016
45. Prevalence of Sindbis virus neutralizing antibodies among Swedish passerines indicates that thrushes are the main amplifying hosts. JO Lundstrom KM Lindstrom B Olsen R Dufva DS Krakower, J Med Entomol 2001 38 289 297 11296837
46. Geographic distribution and evolution of Sindbis virus in Australia. LM Sammels MD Lindsay M Poidinger RJ Coelen JS Mackenzie, J Gen Virol 1999 80 739 748 10092014
47. Antigenic relationships between flaviviruses as determined by cross-neutralization tests with polyclonal antisera. CH Calisher N Karabatsos JM Dalrymple RE Shope JS Porterfield EG Westaway WE Brandt, J Gen Virol 1989 70 37 43 2543738
48. Serologic evidence of West Nile virus infections in wild birds captured in Germany. S Linke M Niedrig A Kaiser H Ellerbrok K Muller T Muller FJ Conraths RU Muhle D Schmidt U Koppen F Bairlein P Berthold G Pauli, Am J Trop Med Hyg 2007 77 358 364 17690413
49. Co-occurrence of West Nile fever and circovirus infection in a goose flock in Hungary. R Glavits E Ferenczi E Ivanics T Bakonyi T Mato P Zarka V Palya, Avian Pathol 2005 34 408 414 10.1080/03079450500268039 16236574
50. Antibodies to alphavirus, flavivirus, and bunyavirus arboviruses in house sparrows (passer domesticus) and tree sparrows (P. montanus) in Poland. Z Juricova J Pinowski I Literak KH Hahm J Romanowski, Avian Dis 1998 42 182 185 10.2307/1592593 9533098
51. (Finnish Game and Fisheries Research Institute: Annual Game Bag 2006) Riista-ja kalatalouden tutkimuslaitos, 2007. Riistasaaliit 2006. Suomen virallinen tilasto. Maa-, metsä-ja kalatalous. Helsinki. 32
52. Techniques for hemagglutination and hemagglutination-inhibition with arthropod-borne viruses. DH Clarke J Casals, Am J Trop Med Hyg 1958 7 561 573 13571577
53. A rapid fluorescent focus inhibition test for detection of neutralizing antibodies to tick-borne encephalitis virus. S Vene M Haglund O Vapalahti A Lundkvist, J Virol Methods 1998 73 71 75 10.1016/S0166-0934(98)00041-X 9705177
54. Diagnostics of Pogosta disease: Antigenic properties and evaluation of Sindbis virus IgM and IgG enzyme immunoassays. T Manni S Kurkela A Vaheri O Vapalahti, Vector Borne Zoon Dis 2007
55. Council Directive, Community measures for the control of Newcastle disease. Annex III, 92/66/EEC
56. Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes. E Spackman DA Senne TJ Myers LL Bulaga LP Garber ML Perdue K Lohman LT Daum DL Suarez, J Clin Microbiol 2002 40 3256 3260 12202562 10.1128/JCM.40.9.3256-3260.2002
57. Validated H5 Eurasian real-time reverse transcriptase-polymerase chain reaction and its application in H5N1 outbreaks in 2005-2006. MJ Slomka T Pavlidis J Banks W Shell A McNally S Essen IH Brown, Avian Dis 2007 51 373 377 10.1637/7664-060906R1.1 17494587
58. Characterization of Newcastle disease virus isolates by reverse transcription PCR coupled to direct nucleotide sequencing and development of sequence database for pathotype prediction and molecular epidemiological analysis. BS Seal DJ King JD Bennett, J Clin Microbiol 1995 33 2624 2630 8567895
59. Universal primer set for the full-length amplification of all influenza A viruses. E Hoffmann J Stech Y Guan RG Webster DR Perez, Arch Virol 2001 146 2275 2289 10.1007/s007050170002 11811679
60. EMBL-EBI. http://www.ebi.ac.uk/blast2
61. T Hall, BioEdit. Biological sequence alignment editor for Windows North Carolina State University, NC, USA 1997
62. The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins, Nucleic Acids Research 1997 25 4876 4882 9396791 10.1093/nar/25.24.4876
63. J Felsenstein, PHYLIP (Phylogeny Inference Package), version 3.6 Department of Genome Sciences, University of Washington, Seattle 2005
64. TREEVIEW: An application to display phylogenetic trees on personal computers. RDM Page, Computer Applications in the Biosciences 1996 12 357 358 8902363