Rhythms and morphogenesis

Rhythms in Plants: Phenomenology, Mechanisms, and Adaptive Significance

Volumn , Issue , 2007, Pages 219-243

  Barlow, Peter W ^a   Lück, Jacqueline ^b  

^a UNIVERSITY OF BRISTOL   (United Kingdom)

^b Atelier de Structuralisme Végétal ^*  (France)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 42149096663     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-3-540-68071-0_11     Document Type: Chapter

References (67)

1. Aon MA, Cortassa S (1997) Dynamic biological organization. Fundamentals as applied to cellular systems. Chapman and Hall, London.
2. Baluška F, Volkmann D, Barlow PW (1997) Nuclear components with microtubule-organizing properties in multicellular eukaryotes: functional and evolutionary considerations. Int Rev Cytol 175:91-135.
3. Baluška F, Volkmann D, Barlow PW (2004) Eukaryotic cells and their cell bodies: cell theory revised. Ann Bot 94:9-32.
4. Baluška F, Volkmann D, Barlow PW (2006) Cell-cell channels and their implications for cell theory. In: Baluška F, Volkmann D, Barlow PW (eds) Cell-cell channels. Eurekah, Georgetown, TX, pp 1-17.
5. Barlow PW (1991) From cell wall networks to algorithms: The simulation and cytology of cell division patterns in plants. Protoplasma 162:69-85.
6. Barlow PW (1992) The meristem and quiescent centre in cultured root apices of the gib-1 mutant of tomato (Lycopersicon esculentum Mill.). Ann Bot 69:533-543.
7. Barlow PW, Luck J (2005) Repetitive cellular patterns in the secondary phloem of conifer and dicot trees, and a hypothesis for their development. Plant Biosystems 139:164-179.
8. Barlow PW, Luck J (2006) Patterned cell development in the secondary phloem of dicotyledonous trees - A review and a hypothesis. J Plant Res 119:271-291.
9. Barlow PW, Palma B (1997) The place of roots in plant development. In: Altman A, Waisel Y (eds) Biology of root formation and development. Plenum Press, New York, pp 1-11.
10. Barlow PW, Powers SJ (2005) Predicting the environmental thresholds for cambial and secondary vascular tissue development in stems of hybrid aspen. Ann Forest Sci 62:565-573.
11. Barlow PW, Luck HB, Luck J (2001) The natural philosophy of plant form: cellular autoreproduction as a component of a structural explanation of plant form. Ann Bot 88: 1141-1152.
12. Borchert R (1991) Growth periodicity and dormancy. In: Raghavendra AS (ed) Physiology of trees. Wiley, New York, pp 221-245.
13. Brams GW (1983) Reseaux de Petri, vol 1. Theorie et pratique. Masson, Paris.
14. Brand U, Fletcher JC, Hobe M, Meyerowitz EM, Simon R (2000) Dependence of stem cell fate in Arabidopsis on a feedback loop regulated by CLV3 activity. Science 289:617-619.
15. Carles CC, Fletcher JC (2003) Shoot apical meristem maintenance: The art of a dynamic balance. Trends Plant Sci 8:394-401.
16. Clark SE (2001) Meristems: Start your signalling. Curr Opin Plant Biol 4:28-32.
17. Clark SE, Running MP, Meyerowitz EM (1993) CLAVATA1, a regulator of meristem and flower development in Arabidopsis. Development 119:397-418.
18. Clark SE, Jacobsen SE, Levin JZ, Meyerowitz EM (1996) The CLAVATA and SHOOT MERISTEMLESS loci competitively regulate meristem activity in Arabidopsis. Development 122:1567-1575.
19. Collings DA, Wasteneys GO (2005) Actin microfilament and microtubule distribution patterns in the expanding root of Arabidopsis thaliana. Can J Bot 83:579-590.
20. Darwin C, assisted by Darwin F (1880) The power of movement in plants. Murray, London.
21. De Koster CG, Lindenmayer A (1987) Discrete and continuous models for heterocyst differentiation in growing filaments of blue-green bacteria. Acta Biotheor 36:249-273.
22. Doerner P (2006) Plant meristems: What you see is what you get. Curr Biol 16:R56-R58.
23. Dormer KJ (1980) Fundamental tissue geometry for biologists. Cambridge University Press, Cambridge.
24. Duckett CM, Oparka KJ, Prior DAM, Dolan L, Roberts K (1994) Dye-coupling in the root epidermis of Arabidopsis is progressively reduced during development. Development 120:3247-3255.
25. Erickson RO (1959) Patterns of cell growth and differentiation in plants. In: Brachet J, Mirsky AE (eds) The cell, vol 1. Academic Press, New York, pp 497-535.
26. Geitler L (1960) Schizophyceen. Handbuch der Pflanzenanatomie, vol VI/1. Gebruder Borntraeger, Berlin-Nikolassee.
27. Giddings TH, Staehelin LA (1978) Plasma membrane architecture of Anabaena cylindrica: Occurrence of microplasmodesmata and changes associated with heterocyst development and the cell cycle. Cytobiologie 16:235-249.
28. Gilbert D, Lloyd D (2000) The living cell: A complex autodynamic multi-oscillator system? Cell Biol Int 24:569-580.
29. Golden JW, Yoon H-S (2003) Heterocyst development in Anabaena. Curr Opin Microbiol 6:567-573.
30. Golubíc S (1967) Die Algenvegetation an Sandsteinfelsen Ost-Venezuelas (Cumuna). Int Rev gesamt Hydrobiol 52:693-699.
31. Greb T, Clarenz O, Schafer E, Muller D, Herrero R, Schmitz G, Theres K (2003) Molecular analysis of the LATERAL SUPPRESSOR gene in Arabidopsis reveals a conserved control mechanism for axillary meristem formation. Genes Dev 17:1175-1187.
32. Gunning BES, Hughes JE, Hardham AR (1978) Formative and proliferative divisions, cell differentiation, and developmental changes in the meristem of Azolla roots. Planta 143:121-144.
33. Halle F, Martin R (1968) Etude de la croissance rythmique chez l'Hevea (Hevea brasiliensis Mull.-Arg. Euphorbiacees-Crotonoidees). Adansonia ser 2 8:475-503.
34. Haupt AW (1923) Cell structure and cell division in the Cyanophyceae. Bot Gaz 75:170-190.
35. Huo G-C, Hill JP (2004) Developmental anatomy of the fifth shoot-borne root in young sporophytes of Ceratopteris richardii. Planta 219:212-220.
36. Iwamoto A, Satoh D, Furutani M, Maruyama S, Ohba H, Sugiyama M (2006) Insight into the basis of root growth in Arabidopsis thaliana provided by a simple mathematical model. J Plant Res 119:85-93.
37. Jonsson H, Heisler M, Reddy GV, Agrawal V, Gor V, Shapiro BE, Mjolsness E, Meyerowitz EM (2005) Modelling the organization of the WUSCHEL expression domain in the shoot apical meristem. Bioinformatics 21 suppl 1:i232-i240.
38. Kessin RH (2001) Dictyostelium. Cambridge University Press, Cambridge.
39. Kirschner M, Mitchison T (1986) Beyond self-assembly: from microtubules to morphogenesis. Cell 45:329-342.
40. Korn RW, Spalding RM (1973) The geometry of plant epidermal cells. New Phytol 72:1357-1365.
41. Lenhard M, Laux T (2003) Stem cell homeostasis in the Arabidopsis shoot meristem is regulated by intercellular movement of CLAVATA 3 and its sequestration by CLAVATA 1. Development 130:3163-3173.
42. Lindenmayer A (1971) Developmental systems without cellular interactions: Their languages and grammars. J Theor Biol 30:455-484.
43. Lindenmayer A (1982) Developmental algorithms: Lineage versus interactive control mechanisms. In: Subtelny S, Green PB (eds) Developmental order: its origin and regulation. AR Liss, New York, pp 219-245.
44. Lindenmayer A, Jurgensen H (1992) Grammars of development: discrete state models for growth, differentiation and gene expression in modular organisms. In: Rozenberg G, Salomaa A (eds) Lindenmayer systems. Impacts on theoretical computer science, computer graphics, and developmental biology. Springer, Berlin Heidelberg New York, pp 3-21.
45. Luck J, Luck HB (1985) Comparative plant morphogenesis founded on map and stereomap generating systems. In: Demongeot J, Goles E, Tchuente M (eds) Dynamical systems and cellular automata. Academic Press, London, pp 111-121.
46. Luck J, Luck HB (1991) Petri nets applied to experimental plant morphogenesis. Acta Biotheor 39:235-252.
47. Luck HB, Luck J (1993) About automata theoretical models for phyllotaxis in a global morphogenetic framework. In: Greppin H, Bonzon M, Degli Agosti R (eds) Some physicochemical and mathematical tools for understanding of living systems. University of Geneva Press, Geneva, pp 333-359.
48. Menges M, Hennig L, Gruissem W, Murray JAH (2002) Cell cycle-regulated gene expression in Arabidopsis. J Biol Chem 277:41987-42002.
49. Mitchell PC (1911) Life. In: Encyclopedia Brittanica, 11th edn. Cambridge University Press, Cambridge, pp 600-601.
50. Mitchison GM, Wilcox M (1972) Rule governing cell division in Anabaena. Nature 239:110-111.
51. Mitchison GM, Wilcox M, Smith RJ (1976) Measurement of an inhibitory zone. Science 191:866-868.
52. Morgenthal K, Weckworth W, Steuer R (2006) Metabolomic networks in plants: Transitions from pattern recognition to biological interpretation. BioSystems 83:108-117.
53. Notov A (2005) Functional organization and individual development of modular objects. Wulfenia 12:65-85.
54. Nougarede A (1967) Experimental cytology of shoot apical cells during vegetative growth and flowering. Int Rev Cytol 21:203-351.
55. Palevitz BA, Hepler PK (1985) Changes in the dye coupling of stomatal cells of Allium and Commelina demonstrated by microinjection of Lucifer yellow. Planta 164:473-479.
56. Paluch E, Sykes C, Prost J, Bornens M (2006) Dynamics modes of the cortical actomyosin gel during cell locomotion and division. Trends Cell Biol 16:5-10.
57. Petri CA (1980) Introduction to general net theory. Lecture Notes Comp Sci 84:1-19.
58. Reddy GV, Meyerowitz EM (2005) Stem-cell homeostasis and growth dynamics can be uncoupled in the Arabidopsis shoot apex. Science 310:663-667.
59. Schoof H, Lenhard M, Haecker A, Mayer KFX, Jurgens G, Laux T (2000) The stem cell population of Arabidopsis shoot meristems is maintained by a regulatory loop between the CLAVATA and WUCHSEL genes. Cell 100:635-644.
60. Sharma VK, Fletcher JC (2002) Maintenance of shoot and floral meristem cell proliferation and fate. Plant Physiol 129:31-39.
61. Tomlinson PB (1969) On the morphology and anatomy of turtle grass, Thalassia testudinum (Hydrocharitaceae). II. Anatomy and development of the root in relation to function. Bull Mar Sci 19:57-71.
62. Veit B (2004) Determination of cell fate in apical meristems. Curr Opin Plant Biol 7:57-64.
63. Vernoux T, Benfey PN (2005) Signals that regulate stem cell activity during plant development. Curr Opin Genet Dev 15:388-394.
64. Wilcox M (1970) One-dimensional pattern found in blue-green algae. Nature 228:686-687.
65. Wilcox M, Mitchison GJ, Smith RJ (1973) Pattern formation in the blue-green alga, Anabaena. I. Basic mechanisms. J Cell Sci 12:707-723.
66. Zhao Y, Medrano L, Ohashi K, Fletcher JC, Yu H, Sakai H, Meyerowitz EM (2004) HANABA TARANU is a GATA transcription factor that regulates shoot apical meristem and flower development in Arabidopsis. Plant Cell 16:2586-2600.
67. Zobel A (1985) The internode of Sambucus racemosa L. originates from a single cell layer. Ann Bot 56:105-107.